GWAS Annotated: ABCC6

Gene: ATP binding cassette subfamily C member 6

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
ABCC6GH16J016084-16:16085147:A:G1.5845Enhancer82-eQTLschr16:16084501-16085647-
KDM1ABCORZMYM3RBM25
ABCC6GH16J016149-16:16149545:A:C1.4806Enhancer269EliteDistancechr16:16149509-16151244-
POLR2AFOXA1NCOR1NR2F6CREMASH2LKDM1ARXRAMAXJUNDXRCC5HNF4AZNF24RESTHNRNPLPOLR2GSKIYY1TFAP4SP1EP300NRF1ETV4MNTHNF4GFOXA2ZHX2FOXK2USF1FOSL2ELF1RBFOX2RBM39AGO2HNRNPLLEP300PCBP1MAXMXI1EGR1RXRAHNRNPLRBM22ETS1HNF4GSP1POLR2GHNF4AESR1PTBP1FOSL2ZMYM3BCORFOXK2FOXA1
ABCC6GH16J016183-16:16183755:C:T0.2156Enhancer56-Distancechr16:16183623-16183773ENSR16_55RQZM
RBM39CTCFZBTB7ARBM25
ABCC6GH16J016194-None0.0000Enhancer208-Distancechr16:16194963-16195113ENSR16_B57R2
RBM22CTCFKDM1ACC2D1APOLR2ARBM39EGR1CREB1BRD9ZNF579ZNF184RAD21RCOR1SMC3MAFKZNF444ZNF217HCFC1TRIM22RB1CTBP1SREBF1ZNF143ZNF24ZNF316C11orf30FOXP1FOXK2ESRRAMYCARID3AARID2STAT1TBL1XR1FOXA2XRCC5BACH1HDAC2SMARCA5GATA3RESTFOXA1ZNF384
ABCC6GH16J016199-None0.0000Enhancer130-eQTLs,Distancechr16:16199563-16199693ENSR16_98FLD
SMARCA5ZNF24NBNIKZF1MEF2BZNF143ZNF217TBX21SKILNFATC3GATAD2BTRIM22IKZF2ATF7BHLHE40TCF12BMI1BACH1DPF2RELBMTA2
ABCC6GH16J016201-None0.0000Enhancer121-Distancechr16:16201343-16201473ENSR16_8GT8T
GATAD2BTRIM22MTA2SKILIKZF1TCF12BCL11ANFATC3NBNATF7TBX21BACH1RELBDPF2IKZF2MEF2BSPI1IRF4BHLHE40
ABCC6GH16J016206-16:16208615:G:A1.1365Enhancer202EliteDistancechr16:16206205-16208800ENSR16_55RWWB
KDM1ASKISPI1PRDM10RAD51IKZF1TAL1TCF12CBFA2T2NR2F1ESRRAARID1BCBFA2T3PKNOX1
ABCC6GH16J016212-None0.0000Enhancer1-Distancechr16:16212000-16212800-
POLR2A
ABCC6GH16J016213-16:16214818:C:T1.3833Enhancer183EliteDistancechr16:16213425-16214988ENSR16_98FQK
EP300SKICREB1POLR2ALCORLFOXA2MAFKFOXP1ATF7
ABCC6GH16J016223-None0.0000Promoter338EliteDistancechr16:16222999-16223801ENSR16_98FT8, ENSR16_B57X6, ABCC6_1, ABCC6_2
POLR2APOLR2ASKITBX3FOXK2CREB1
ABCC6GH16J016593-16:16593751:G:C0.3445Enhancer133-eQTLschr16:16593331-16593877ENSR16_B59WN
GABPB1PRDM10NR2C1CTCFRAD21TRIM22ZNF143SMC3IKZF1RESTPOLR2A