Regulatory Elements for AFF3

Full Name: ALF transcription elongation factor 3

Location: chr2:99545419-100192428

Date: 2026-02-22 20:10:13

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH02J099877 Enhancer 516 Elite eQTLs,eRNA_co-expression,Distance chr2:99877916-99883954 ENSR2_BPS74, ENSR2_84X9QQ, ENSR2_BPS7B, ENSR2_5THBDT, ENSR2_BPS7J
CEBPBRXRARUNX3HNF4ASPI1ESR1CEBPBGATA2POLR2AJUNDNFE2L2BHLHE40FOSSIX5SMARCA4GATA2USF1POLR2AUSF2JUNDFOSBHLHE40CEBPBNFE2L2RAD21SMC3RCOR1PKNOX1RFX5SMARCA4CTCFCTCFMXI1EP300TRIM28PKNOX1ESR1POLR2ASMC3RAD21MEIS2JUNDSIN3ARESTTAF1NR3C1CTBP1YY1GATA2ZNF263PKNOX1ESR1MAFK
GH02J100008 Enhancer 399 Elite eRNA_co-expression,Distance chr2:100008557-100015525 ENSR2_BPSTW, ENSR2_BPSWL, ENSR2_5TJ66S
JUNDEP300SPI1SPI1IKZF1ESR1RCOR1JUNDNR2F2BHLHE40FOSMAFKEP300CTCFTRIM28GATA3CTBP1ATF7SP1FOXA2JUNDMAXARID1BHNF4AFOSCHD1JUNRCOR1ESR1ATF4RAD21MYCMAFKBHLHE40ZNF316ATF3FOSL2RXRANFE2L2SMC3EP300EP400NR2F1TBPBACH1TRIM24IKZF1CEBPBL3MBTL2POLR2A
GH02J100104 Promoter/Enhancer 370 Elite eQTLs,Distance chr2:100104199-100107002 ENSR2_CCX7B, ENSR2_84XGL2, ENSR2_CCX7F, ENSR2_5TJPTJ, ENSR2_77TX8L, ENSR2_93GPS3
ZFXFOXM1POLR2AMXI1SMC3EZH2SUZ12SMARCE1RBM39RAD21RUNX3L3MBTL2RNF2RBBP5EP300SP1ZNF263TRIM28EP300EGR1RNF2ZFXTCF12
GH02J099771 Enhancer 369 Elite Distance chr2:99771195-99773471 ENSR2_93GL89
GABPB1ZBTB11ZBTB40E2F1NRF1E4F1EP400CREB1MNTATF2ATF3GABPACBX3POLR2AFOXK2ARID1BATF7ETV6CREB3L1SKILCBFA2T3CREMCHAMP1MTA3NR2F6DPF2ARNTZEB2TBPZNF592SMARCC2RNF2SOX6ZNF282MEIS2NEUROD1HDAC3CTBP1TAL1MBD2CC2D1ANCOA6NBNZBED1TRIM28HDAC1NCOR1TRIM24ZNF639EGR1GATA2BCORTEAD4NCOA2RESTKLF16SMARCA4ATF4MYCL3MBTL2ZNF184GATAD2BNCOA1NFATC3JUNDKDM1ACBFA2T2TBL1XR1JUNRCOR1NR2F1TCF12LEF1RLFIKZF1STAT1DACH1PHB2HES1ZNF318PKNOX1SMARCE1STAT5APMLZSCAN29HDAC2GATAD2AMTA2RB1GATA1NR3C1NFICFOXM1SMAD1CUX1BHLHE40NR2F2MLLT1EP300ZBTB5MGAZNF24AFF1EHMT2ESRRAMTA1CEBPBE2F6NFRKBMAXSPI1MEIS2EP400
GH02J099867 Enhancer 341 Elite Distance chr2:99867571-99868408 ENSR2_93GM8X
MXI1GATA2FOSE2F1CREMCEBPBL3MBTL2STAT3MAXMGABHLHE40MYCE2F6ATF3SMARCA4USF2GATA2SMARCA4RCOR1
GH02J100140 Enhancer 303 Elite eQTLs,Distance chr2:100140384-100143323 ENSR2_93GQ6X, ENSR2_BPTL6, ENSR2_BPTL8
POLR2ATAF1SPI1CREB1BATFCTCFPOLR2ANBNMTA2MEF2BPKNOX1TAF1ELF1ZBED1CBX5SRFGABPAZNF217TBL1XR1BCL3RCOR1SPI1RUNX3RAD21BHLHE40BACH1NFICEEDPOU2F2IKZF1RESTNFATC3MEF2CTBX21EP300ETS1ELK1ATF2MTA3YY1DPF2PAX5EZH2TCF12MEF2ASTAT5AIRF4NFATC1JUNBETV6BATFRXRACBFBBCL11ACREMIKZF2
GH02J100067 Enhancer 297 Elite eQTLs,eRNA_co-expression,Distance chr2:100067538-100069067 ENSR2_93GPDT
ASH2LHDAC1FOXA2GATA3SP1KDM1AJUNDNCOR1ATF3FOXA1RXRAHNF1AETV4ZNF24GATA4TFAP4TBX3HDAC2FOXK2ESR1SOX13RAD21SKIEP300MAFFBHLHE40CREMNR2F6RESTHNF4AETS1TCF12TCF7ZNF384FOSL2POLR2AZBTB33RNF2ARID3AFOXP1TBL1XR1NR3C1CBX2CTCF
GH02J100196 Enhancer 274 Elite eQTLs,Distance chr2:100196438-100199294 ENSR2_CCXG4, ENSR2_84XJLK
CTCFEP300SP1TRIM28POLR2AEP300TBPUBTFNRF1ARID1BCTBP1SMARCA4RAD21TAF7RCOR1SOX6TCF12RFX5CBFA2T2ZNF24CTCFTAL1MEIS2CBFA2T3IKZF1RXRAPKNOX1ELF1NFIC
GH02J099636 Enhancer 256 Elite eQTLs,Distance chr2:99636181-99639048 ENSR2_CCTXJ, ENSR2_93GJRK
MNTCREB3L1MGAMXI1FOXA2ZNF687BCORRNF2RAD21POLR2ANR2F6NFIBZNF217MAXMYCFOSNR2F2ZNF316NCOR1CTCFCREB1DPF2UBTFARID1BNFICTCF12RXRAZKSCAN1TAL1ESR1JUNDRESTCBFA2T3GATA3GATA2NCOA3MTA1RCOR1HNF4ANR2F1ESRRAHES1EP300NFXL1RAD51SP1IKZF1CLOCKNR3C1CTBP1CBFA2T2MBD2ELF1BHLHE40USF1ESR1CTCFRUNX3POLR2AEZH2
GH02J100393 Enhancer 250 Elite eRNA_co-expression chr2:100393874-100396016 ENSR2_93GSWB
PAX8IKZF2MTA2MLLT1MEF2BEBF1BHLHE40ZNF687POLR2APAX5ZNF592ATF7RFX5CREB1CREMNBNTAF1E4F1YY1POU2F2BCL3ZNF384PKNOX1SMARCA5ATF7ARID3AZBTB40HDAC2MTA2DPF2IKZF1JUNBATF2NFATC3SKILGATAD2BNBNJUNDEP300YY1BCL11ATBPCUX1MLLT1RELBSPI1TBX21PKNOX1TRIM22NFICETV6BCL3POU2F2EBF1ZBED1IKZF2ELF1BATFRUNX3ARNTSMAD1TCF12IRF4MEF2BCREMMXI1TAF1STAT3EEDPAX5ETS1BHLHE40MAXSMC3ZNF687ZNF592
GH02J100192 Enhancer 199 Elite eQTLs,Distance chr2:100192916-100195787 ENSR2_93GQQ7
SP1FOXA2RXRARAD21NR2F2HNF4APKNOX1MEIS2CTBP1FOSEP300IKZF1SOX6GATA2EP300CTCFPOLR2ACEBPB
GH02J099821 Enhancer 188 Elite Distance chr2:99821530-99823211 ENSR2_93GLQL, ENSR2_93GLQW
CTCFMGAMITFMAXMNTCEBPBFOSUSF1SMC3USF2BHLHE40ATF2CREB1ATF7JUNDE2F1CREMEP300RAD21
GH02J099706 Enhancer 183 Elite Distance chr2:99706799-99708257 ENSR2_BPR97, ENSR2_93GKJL
POLR2ASPI1NFICNFIBEP300CEBPBLCORLCTCFMXI1
GH02J100113 Enhancer 180 Elite eQTLs,C-HiC,Distance chr2:100113143-100115591 ENSR2_BPTG4
ETS1SPI1
GH02J100018 Enhancer 167 Elite eQTLs,Distance chr2:100018165-100019789 ENSR2_93GNTN
MXI1EP300MAFKPKNOX1CTCFJUNDFOSCEBPBRAD21
GH02J099662 Enhancer 161 Elite eQTLs,Distance chr2:99662298-99664152 ENSR2_BPR2S
FOXA2NR2F2EP300FOSJUNDESR1BHLHE40NR3C1SIN3AJUNDCEBPBFOSRAD21ESR1GATA3
GH02J099827 Enhancer 153 Elite Distance chr2:99827191-99827702 ENSR2_93GLS8
MAXHNF4ARAD21RXRASPI1SP1
GH02J099648 Enhancer 133 Elite Distance chr2:99648418-99649307 ENSR2_CCTZD
USF2BHLHE40EP300CTCFFOSSMC3RAD21SPI1
GH02J099860 Enhancer 133 Elite Distance chr2:99860830-99861458 ENSR2_BPS4J
ZNF316MAFKMAFFNFICARID1BFOSSOX6
GH02J099861 Enhancer 133 Elite Distance chr2:99861478-99861708 ENSR2_BPS4J
NFICARID1BFOSSOX6RESTSPI1RUNX3GATA2
GH02J100017 Enhancer 133 Elite Distance chr2:100017304-100017930 ENSR2_93GNTC
TRIM28SMARCA4PKNOX1
GH02J099841 Enhancer 63 Elite Distance chr2:99841858-99842008 ENSR2_93GLZG
FOSMNTUSF2NFE2L2SMC3BHLHE40SPI1
GH02J099859 Enhancer 63 Elite Distance chr2:99859278-99859428 ENSR2_93GM6H None
GH02J100109 Enhancer 63 Elite eQTLs,Distance chr2:100109816-100110682 None
EZH2PAX5
GH02J099609 Enhancer 217 - Distance chr2:99609418-99610862 ENSR2_93GJHB
ZNF24EP400ZNF217MNTZNF282JUNDDPF2GMEB1CTBP1NFIBRCOR1FOXA1AFF1FOSATF7ZEB2SMARCE1HDAC3GABPB1HDAC1HMBOX1MYCIKZF1NFATC3FOXK2CEBPBMLLT1CBFA2T3ZNF639ATF4ATF2CREB1EHMT2HDAC2SMARCA4MITFNR2F1PKNOX1MTA1ARID1BBCORGATA3MBD2MAXNCOA1ZNF316RNF2GATAD2BLEF1NFICRAD51BRD9ESR1ESRRATAL1MGATRIM24ATF3SOX6NR2F2ARNTZBTB2MTA3L3MBTL2KDM1ATCF12EP300TEAD4NBNNCOA3SMARCC2NCOR1CBFA2T2TRIM28CHAMP1KLF16PHB2GATA2MTA2NFRKBGATA1GATAD2ANR2C1MEIS2NR2F6
GH02J099559 Enhancer 185 - Distance chr2:99559198-99559368 ENSR2_BPQGS, ENSR2_5TF97H, ENSR2_5TF97Z
CTCFZBTB33L3MBTL2SMC3RAD21ATF7MNTZNF217ZNF24TRIM22RXRANCOA1CC2D1AFOSRNF2ZNF143ZNF444ZSCAN29RB1SMARCA5RCOR1MYCBHLHE40RESTSIN3BSKIARID2YY1JUNDMGARBM25MAXSMARCA4XRCC5
GH02J099974 Enhancer 182 - Distance chr2:99974405-99976130 ENSR2_93GNDR, ENSR2_BPSP2
TRIM28ZNF263MXI1SMARCA4FOSEP300JUNDRAD21SIN3ACEBPBGATA2MEIS2GATA3RCOR1ESR1FOSBCL3FOSSMARCA4
GH02J100178 Enhancer 178 - Distance chr2:100178198-100178328 ENSR2_BPTRD, ENSR2_5TK7C5
CTCFCTBP1DPF2ZNF444RCOR1HNRNPLLZNF579NRF1SMARCA4TRIM22CREB1RFX1ATF7HDAC1E2F1SMC3RXRASP1RAD21GABPAPKNOX1FOXA1ARID3AZNF143GABPB1FOXK2MYCELK1YY1NR2C1ZBTB40ELF1CREMIRF1MTA2RESTHCFC1FOXA2BMI1ELF4NFATC3E4F1JUNDPOU2F2
GH02J099899 Enhancer 173 - Distance chr2:99899380-99899588 None
YY1SP1RAD21HNF4AJUNDATF3NR2F2RXRAFOXA1KAT2BMAFKMAFFMAX
GH02J100213 Enhancer 168 - eQTLs chr2:100213751-100214968 ENSR2_BPTZM
MAXRAD21ESR1RXRAHNF4AEP300SP1YY1KDM1AHNF4AARID3ARESTRXRAJUNDGABPASP1RAD21CEBPBESR1EP300MAXZBTB33ATF3FOXA2NR2F2SMC3EGR1FOXA1SPI1CTCFTBX3XRCC5TCF7HNF4GBHLHE40NCOR1FOSL2POLR2AEP300
GH02J099939 Enhancer 137 - Distance chr2:99939218-99939368 None
YY1RAD21LCORLZBTB33NFICJUNDSP1RESTRXRAEGR1FOXA1NR2F2NFIBFOXA2HNF4AATF3HNF4G
GH02J099614 Enhancer 133 - Distance chr2:99614771-99616064 ENSR2_5TFLSF, ENSR2_84X44X, ENSR2_5TFLTJ
TRIM28RNF2RBM39ZNF592L3MBTL2ZNF687CTCFMGAMAXXRCC5MYCRESTZBTB33RAD21SMC3
GH02J099863 Enhancer 130 - Distance chr2:99863618-99865587 ENSR2_77TJT3, ENSR2_BPS54
FOSCEBPBYY1RESTEZH2JUNDEP300RAD21RXRAEGR1MAXFOXA2ATF3GATA2ZBTB33FOXA1SP1HNF4AGATA3CEBPB
GH02J099601 Enhancer 105 - Distance chr2:99601442-99603332 ENSR2_93GJF8
C11orf30FOSZNF316MAFKJUNDMAFF
GH02J099806 Enhancer 99 - Distance chr2:99806758-99807008 ENSR2_93GLLB
NFIBJUNDELF1ESR1FOXA1GATA3MYC
GH02J100056 Enhancer 99 - Distance chr2:100056598-100056708 ENSR2_BPT5R
GATA2GATA3JUNDFOXA1ESR1
GH02J099728 Enhancer 91 - Distance chr2:99728434-99730037 ENSR2_93GKQT
NRF1RFX1GATA3EP300
GH02J099697 Enhancer 82 - eQTLs,Distance chr2:99697934-99699461 ENSR2_BPR7X, ENSR2_84X5W8
CHD1RESTFOSEP300RCOR1RAD21MAFKBHLHE40NFE2L2SMC3CEBPBATF3ATF7STAT3ATF4CEBPBFOSMYC
GH02J099710 Enhancer 82 - Distance chr2:99710308-99712056 ENSR2_BPR9R
ESR1FOXA1ZNF316MAFKMAFF
GH02J099856 Enhancer 82 - Distance chr2:99856859-99858363 None
MAFKSPI1RUNX3C11orf30MAFKMAFFZNF316
GH02J099984 Enhancer 82 - Distance chr2:99984225-99985568 ENSR2_BPSQF
GATA2ESR1RCOR1RAD21YY1PKNOX1
GH02J100173 Enhancer 82 - eQTLs,Distance chr2:100173800-100174527 ENSR2_93GQJL
RXRARESTSP1RAD21HNF4AJUNDNR2F2
GH02J099822 Enhancer 71 - Distance chr2:99821296-99821368 None
CTCFRESTRAD21
GH02J099812 Enhancer 63 - Distance chr2:99812667-99812895 None
EZH2
GH02J099606 Enhancer 56 - Distance chr2:99606579-99607236 ENSR2_93GJGH None
GH02J100060 Enhancer 56 - Distance chr2:100060618-100061598 None
CREB1ATF2ETS1RUNX3
GH02J099649 Enhancer 36 - Distance chr2:99648198-99648348 ENSR2_CCTZD
CEBPB
GH02J099777 Enhancer 36 - Distance chr2:99777199-99777401 None
ZNF316NFE2NFE2L2
GH02J099785 Enhancer 36 - Distance chr2:99785400-99785600 None None
GH02J099804 Enhancer 36 - Distance chr2:99804018-99804068 None
ZNF316
GH02J099811 Enhancer 36 - Distance chr2:99811698-99811848 ENSR2_93GLMP
JUNDMYCFOS
GH02J099851 Enhancer 36 - Distance chr2:99851118-99851988 None
PKNOX1SP1RXRAHNF4AREST
GH02J100071 Enhancer 36 - Distance chr2:100071600-100071800 None
RUNX3SPI1
GH02J099739 Enhancer 6 - eRNA_co-expression,Distance chr2:99739129-99739508 None None
GH02J099866 Enhancer 1 - Distance chr2:99866043-99866975 ENSR2_BPS58
STAT3CEBPBCTCFRAD21
GH02J099926 Enhancer 1 - Distance chr2:99926198-99927528 ENSR2_84XBR8
FOSCEBPB
GH02J100083 Enhancer 1 - eQTLs,Distance chr2:100083400-100084273 ENSR2_BPT9P None