GWAS Annotated: BCCIP

Gene: BRCA2 and CDKN1A interacting protein

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
BCCIPGH10J125767-10:125769185:C:T0.3119Enhancer226EliteTF_co-expressionchr10:125767562-125769688ENSR10_93SWSB
NFICNFIBSMAD1LCORL
BCCIPGH10J125798-None0.0000Enhancer143-C-HiCchr10:125798051-125798201-
ASH2LKDM1AHNF1AFOXA2RAD21HDAC2FOXA1
BCCIPGH10J125822-10:125824871:A:C0.8793Promoter/Enhancer638EliteDistancechr10:125822185-125825340ENSR10_BWZ7J, ENSR10_534L3JG, ENSR10_93SXF7, ENSR10_93SXFN, UROS_1, BCCIP_1
MLLT1ZBTB33CHD4KDM1ABCORCTCFRBFOX2ZFXSIN3ANRF1HDAC2HNRNPLLPHF8ZNF217UBTFL3MBTL2POLR2GFUSASH2LAGO2TAF1MXI1SMC3RAD21RBM39RB1SREBF2GATAD2AMYCMAXKDM4AHNRNPLNR3C1IKZF1ZNF687MEF2BSMARCA5GATAD2BXRCC5DPF2KDM5BPOLR2ABHLHE40HNRNPKBACH1ETS1EGR1RNF2ZBTB7ARESTBRD4SMAD5MNTZNF639KDM5AEP300PRDM10TCF7L2ZNF24SP1ZNF263ATF7HNF4AKDM1AZBTB40TRIM22GMEB1NR2C1ARNTTCF12MTA2ZNF444MEIS2NR2F2TBX21CREB3L1CBFA2T3ZBTB2PKNOX1ARID1BNCOA1ZNF143CREB1NR2F1TRIM24ZNF207FOXK2NFATC3NR2C2SMARCE1CTBP1KLF5TEAD4TBL1XR1MLLT1NFICGABPAMIER1CREMNEUROD1FOXM1SRFNCOR1ATF2RELBCHAMP1JUNDHCFC1ZBTB7BRXRAATF3GATA3YY1ZKSCAN1EP400E2F1RCOR1E4F1CHD1NBNNUFIP1E2F4GABPB1SREBF1AFF1CBFBELF4MCM7ZEB2ASH1LELF1BRCA1SMAD1PCBP1ZNF579ZBTB11ESRRACLOCKSTAT3JUNFOXA1NR3C1RUNX3TBPETV4IRF1SIX5MBD2USF1MAFFIRF3NFRKBMCM3PHB2SKILFOSL2NR2F6ELK1STAT1HES1ZBTB5MTA3C11orf30HDAC1KDM5ASIN3BSAP30PHF8SPI1TAF9BWRNIP1SMAD5RBBP5ZNF512BFOSL2MNTZNF263RBFOX2KDM1AHDAC1ATF3HDAC2FOSMAXMYCJUNDNFE2NFE2L2PRDM10
BCCIPGH10J125828-None0.0000Enhancer36-Distancechr10:125828969-125829502-
ZNF316MAFKMEIS2
BCCIPGH10J125843-10:125844213:A:C1.0189Enhancer1-C-HiC,Distancechr10:125843663-125844440--
BCCIPGH10J125844-None0.0000Enhancer71-C-HiC,Distancechr10:125844775-125846238-
SP1HNF4APOLR2ARXRAPOLR2G
BCCIPGH10J125847-None0.0000Enhancer18-C-HiC,Distancechr10:125847136-125847250-
ZFXMTA2
BCCIPGH10J125850-10:125850627:T:C1.1457Enhancer56-C-HiC,Distancechr10:125850493-125851867--
BCCIPGH10J125868-None0.0000Enhancer218EliteC-HiC,Distancechr10:125868491-125868641ENSR10_93SXWB
CTCFTCF7L2PKNOX1TRIM22ZNF444ELF1RESTFOXA1RAD21ZNF24ZNF143RCOR1SPI1GATA3FOXA2SMC3MAFFGATAD2B
BCCIPGH10J125892-None0.0000Enhancer213EliteTF_co-expressionchr10:125892167-125893161-
FOXA2
BCCIPGH10J125894-10:125897310:G:C0.3784Promoter/Enhancer702EliteTF_co-expressionchr10:125894831-125897601ENSR10_93SZ7C, ENSR10_BWZL8, DHX32_1, FANK1_1
YY1EP400HDAC1DPF2ZBTB40GATA3RNF2SMARCA4POLR2AZSCAN29MGAIKZF2GABPAMNTETV4GABPB1ZFP91ELF1EP300NRF1MXI1ZNF407BHLHE40SOX6CREB1RBFOX2MYCPOLR2GPHF8ZFXNFE2E2F6L3MBTL2RESTCREMCTCFZNF263ZBTB7ACHD1ZNF316IKZF1ZNF143ZNF217SAFBSMARCA5GATAD2BTAF1ZNF24KDM4ASIN3AL3MBTL2FOXM1ELK1SMAD5CTBP1ZNF687MTA3RFX1SP1POLR2GLEF1ATF7NCOA6ESRRADPF2BHLHE40MNTBACH1ZNF407ELF1MAXMEF2BEP300E4F1RB1RBM22PRDM10ZBTB40SKIHNRNPLLU2AF2MBD2RUNX3GABPB1HCFC1ZNF207CREMRNF2SAP30HDAC2EGR1HDAC1BMI1ZSCAN29SMC3RBM39SREBF2CBX2RNF2
BCCIPGH10J126017-10:126018154:A:G0.1065Enhancer36-TF_co-expressionchr10:126017634-126018563ENSR10_93T2HK-
BCCIPGH10J126208-10:126210871:C:T1.6689Enhancer146-TF_co-expressionchr10:126208550-126210880ENSR10_93T4JR
NFICNFIBLCORLUSF2