GWAS Annotated Elements: BCCIP

Gene: BRCA2 and CDKN1A interacting protein

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH10J125767 - 10:125769185:C:T 0.3119 Enhancer Elite TF_co-expression chr10:125767562-125769688
NFICNFIBSMAD1LCORL
GH10J125798 - None 0.0000 Enhancer - C-HiC chr10:125798051-125798201
ASH2LKDM1AHNF1AFOXA2RAD21HDAC2FOXA1
GH10J125822 - 10:125824871:A:C 0.8793 Promoter/Enhancer Elite Distance chr10:125822185-125825340
MLLT1ZBTB33CHD4KDM1ABCORCTCFRBFOX2ZFXSIN3ANRF1HDAC2HNRNPLLPHF8ZNF217UBTFL3MBTL2POLR2GFUSASH2LAGO2TAF1MXI1SMC3RAD21RBM39RB1SREBF2GATAD2AMYCMAXKDM4AHNRNPLNR3C1IKZF1ZNF687MEF2BSMARCA5GATAD2BXRCC5DPF2KDM5BPOLR2ABHLHE40HNRNPKBACH1ETS1EGR1RNF2ZBTB7ARESTBRD4SMAD5MNTZNF639KDM5AEP300PRDM10TCF7L2ZNF24SP1ZNF263ATF7HNF4AKDM1AZBTB40TRIM22GMEB1NR2C1ARNTTCF12MTA2ZNF444MEIS2NR2F2TBX21CREB3L1CBFA2T3ZBTB2PKNOX1ARID1BNCOA1ZNF143CREB1NR2F1TRIM24ZNF207FOXK2NFATC3NR2C2SMARCE1CTBP1KLF5TEAD4TBL1XR1MLLT1NFICGABPAMIER1CREMNEUROD1FOXM1SRFNCOR1ATF2RELBCHAMP1JUNDHCFC1ZBTB7BRXRAATF3GATA3YY1ZKSCAN1EP400E2F1RCOR1E4F1CHD1NBNNUFIP1E2F4GABPB1SREBF1AFF1CBFBELF4MCM7ZEB2ASH1LELF1BRCA1SMAD1PCBP1ZNF579ZBTB11ESRRACLOCKSTAT3JUNFOXA1NR3C1RUNX3TBPETV4IRF1SIX5MBD2USF1MAFFIRF3NFRKBMCM3PHB2SKILFOSL2NR2F6ELK1STAT1HES1ZBTB5MTA3C11orf30HDAC1KDM5ASIN3BSAP30PHF8SPI1TAF9BWRNIP1SMAD5RBBP5ZNF512BFOSL2MNTZNF263RBFOX2KDM1AHDAC1ATF3HDAC2FOSMAXMYCJUNDNFE2NFE2L2PRDM10
GH10J125828 - None 0.0000 Enhancer - Distance chr10:125828969-125829502
ZNF316MAFKMEIS2
GH10J125843 - 10:125844213:A:C 1.0189 Enhancer - C-HiC,Distance chr10:125843663-125844440 -
GH10J125844 - None 0.0000 Enhancer - C-HiC,Distance chr10:125844775-125846238
SP1HNF4APOLR2ARXRAPOLR2G
GH10J125847 - None 0.0000 Enhancer - C-HiC,Distance chr10:125847136-125847250
ZFXMTA2
GH10J125850 - 10:125850627:T:C 1.1457 Enhancer - C-HiC,Distance chr10:125850493-125851867 -
GH10J125868 - None 0.0000 Enhancer Elite C-HiC,Distance chr10:125868491-125868641
CTCFTCF7L2PKNOX1TRIM22ZNF444ELF1RESTFOXA1RAD21ZNF24ZNF143RCOR1SPI1GATA3FOXA2SMC3MAFFGATAD2B
GH10J125892 - None 0.0000 Enhancer Elite TF_co-expression chr10:125892167-125893161
FOXA2
GH10J125894 - 10:125897310:G:C 0.3784 Promoter/Enhancer Elite TF_co-expression chr10:125894831-125897601
YY1EP400HDAC1DPF2ZBTB40GATA3RNF2SMARCA4POLR2AZSCAN29MGAIKZF2GABPAMNTETV4GABPB1ZFP91ELF1EP300NRF1MXI1ZNF407BHLHE40SOX6CREB1RBFOX2MYCPOLR2GPHF8ZFXNFE2E2F6L3MBTL2RESTCREMCTCFZNF263ZBTB7ACHD1ZNF316IKZF1ZNF143ZNF217SAFBSMARCA5GATAD2BTAF1ZNF24KDM4ASIN3AL3MBTL2FOXM1ELK1SMAD5CTBP1ZNF687MTA3RFX1SP1POLR2GLEF1ATF7NCOA6ESRRADPF2BHLHE40MNTBACH1ZNF407ELF1MAXMEF2BEP300E4F1RB1RBM22PRDM10ZBTB40SKIHNRNPLLU2AF2MBD2RUNX3GABPB1HCFC1ZNF207CREMRNF2SAP30HDAC2EGR1HDAC1BMI1ZSCAN29SMC3RBM39SREBF2CBX2RNF2
GH10J126017 - 10:126018154:A:G 0.1065 Enhancer - TF_co-expression chr10:126017634-126018563 -
GH10J126208 - 10:126210871:C:T 1.6689 Enhancer - TF_co-expression chr10:126208550-126210880
NFICNFIBLCORLUSF2