GWAS Annotated Elements: BNC2

Gene: basonuclin zinc finger protein 2

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH09J016135 - 9:16138090:T:A 1.3755 Enhancer Elite eQTLs chr9:16135551-16140850
CTCFEP300CEBPBSTAT3FOSRAD21SMARCA4POLR2AFOSEP300RAD21CEBPBSMC3ZNF263CTCF
GH09J016206 - 9:16206697:A:G 1.2469 Enhancer Elite eQTLs,C-HiC chr9:16206637-16207980
POLR2AREST
GH09J016211 - 9:16215746:C:T 0.6245 Enhancer Elite eQTLs chr9:16211957-16215768
POLR2ABCL3YY1ZBTB33RXRAHNF4ARCOR1GABPASP1JUNDRESTSIN3ABHLHE40RAD21FOSTCF12FOXA1ATF3EP300NR2F2FOSL2CTCFEP300POLR2A
GH09J016412 - 9:16414758:C:T 0.3495 Enhancer Elite Distance chr9:16412826-16414816
RESTEP300MAFKSIN3AZBTB33SIX5YY1MAXRESTETS1RAD21JUNDSP1GABPATCF12RXRAEGR1CREB1EP300NR2F2ELF1ATF7CEBPBCREMBHLHE40RCOR1ATF3SOX13NR3C1SMC3FOSSTAT3MYCZNF24GATA2HNF4AJUNETV4HDAC2TBL1XR1SKIBCL3FOXA1FOXA2FOSL2TBX3RNF2MNTKDM1AHNF4GTAF1TCF7TFAP4POLR2AUSF2NR2F6USF1BMI1SP1RXRABCL3TCF12NR3C1FOXA1
GH09J016416 - 9:16416975:G:A 0.8350 Enhancer Elite Distance chr9:16416702-16418174
CTCFSP1IKZF1FOXA1EP300FOXA2TBX21MAFKMTA2FOSTBL1XR1RCOR1BHLHE40CEBPBRAD21RUNX3IKZF2MAFKSTAT3FOS
GH09J016421 - None 0.0000 Enhancer - Distance chr9:16421602-16421752
MXI1SMC3RCOR1SMARCA4RAD21EP300ESR1JUND
GH09J016425 - 9:16426124:A:C 0.7311 Enhancer Elite Distance chr9:16425245-16426273
CEBPBFOSJUND
GH09J016427 - None 0.0000 Enhancer - Distance chr9:16427163-16427379 -
GH09J016428 - None 0.0000 Enhancer - Distance chr9:16427403-16427615 -
GH09J016429 - None 0.0000 Enhancer - Distance chr9:16427903-16428260 -
GH09J016442 - 9:16443042:A:G 0.3914 Enhancer Elite Distance chr9:16442481-16443111
EP300FOSL2JUNDESR1FOS
GH09J016449 - 9:16449255:G:A 0.9964 Enhancer - Distance chr9:16449170-16449583
GATA2RCOR1PKNOX1
GH09J016458 - 9:16459177:G:T 0.4301 Enhancer Elite Distance chr9:16458436-16460641
ZBTB40RUNX3ELF1IKZF1NFICMEF2BKLF5FOSJUNBRAD51TBX21NBNRELBSMAD1ZNF687ATF2BHLHE40IKZF2ATF7EEDZBED1MXI1BATFTRIM22POLR2AFOXK2ETV6NFATC1MYCMEF2AASH2LEBF1DPF2NFATC3SIN3AWRNIP1RCOR1EP300TCF12SKILSTAT3MAXBHLHE40RFX5MLLT1
GH09J016461 - 9:16461907:T:C 0.5171 Enhancer - Distance chr9:16461148-16461923
ASH2LEEDCHD7SP1MTA2IKZF2IKZF1MEF2BEP300NANOGESR1ZNF687TCF12PAX5NBNCREMRUNX3RXRAKLF5BHLHE40
GH09J016484 - 9:16485364:T:G 1.4884 Enhancer - Distance chr9:16484402-16485592
RAD21RCOR1GATA2GATA3RCOR1IKZF2GATA2FOXA1
GH09J016485 - 9:16486144:T:C 0.1409 Enhancer - Distance chr9:16485654-16486672
KDM1ATAF1CHD7NANOGYY1SIN3AEP300EGR1RAD21TCF12SP1HDAC2JUNDSMARCA4BCL11A
GH09J016499 - 9:16502115:A:C 1.0697 Enhancer - Distance chr9:16499877-16502421
FOSMAFKSTAT3GATA2CEBPBJUNDMAFF
GH09J016504 - 9:16506179:A:T 1.0216 Enhancer Elite Distance chr9:16504664-16507092
TCF12TCF7L2SP1POLR2ARCOR1GATA2FOXA1JUNDBHLHE40NR3C1GATA3TAF1EP300SMC3SPI1
GH09J016508 - 9:16508653:G:C 0.4669 Enhancer - eRNA_co-expression,Distance chr9:16508531-16508713 -
GH09J016509 - 9:16509934:C:G 1.1585 Enhancer Elite Distance chr9:16509522-16510963
IKZF2FOSL2JUNDFOSTAF1SIN3AIKZF1ESR1YY1RESTRAD21BATFMAFKMAFFGATA2FOSCEBPB
GH09J016514 - 9:16514377:C:A 0.0088 Enhancer - Distance chr9:16514166-16514548
EP300EZH2
GH09J016515 - 9:16516943:T:C 1.6619 Enhancer Elite Distance chr9:16514882-16517668
EZH2GATA2RCOR1RBBP5RXRANR2F2JUNDCEBPBSRFEP300POLR2ATAF1RAD21HDAC2YY1TBPTAF7SREBF1EP300
GH09J016518 - 9:16519573:T:C 0.4786 Enhancer - Distance chr9:16518791-16519932
CTCF
GH09J016521 - 9:16521301:G:A 0.0361 Enhancer Elite eRNA_co-expression,Distance chr9:16521210-16523271
IKZF2JUNDDPF2FOSRUNX3MAFKRESTPKNOX1EP300TAF1SIN3AIKZF1TBX21IKZF2IKZF1
GH09J016526 - 9:16527131:A:G 1.3910 Enhancer Elite eRNA_co-expression,Distance chr9:16526122-16527252
FOSGATA2JUNDMYCSTAT3RAD21MAFK
GH09J016530 - 9:16531047:A:T 0.6490 Enhancer Elite Distance chr9:16530141-16531497
CEBPBPOLR2ACTCFEP300STAT3FOSMYCCEBPB
GH09J016532 - 9:16532766:C:T 1.4831 Enhancer Elite Distance chr9:16532292-16533486
YY1FOSL2MAFKSTAT3FOSJUNDYY1NFE2L2FOXA1
GH09J016542 - None 0.0000 Enhancer - Distance chr9:16541282-16541432
EP300PKNOX1
GH09J016541 - None 0.0000 Enhancer - Distance chr9:16541982-16542132
NFICRUNX3MEF2AIKZF2
GH09J016571 - 9:16571823:C:G 0.6411 Enhancer Elite Distance chr9:16571518-16571900
MXI1SMC3RAD21EP300PKNOX1
GH09J016575 - None 0.0000 Enhancer Elite Distance chr9:16575600-16575800
CTCFRAD21GATA2GATA3
GH09J016576 - None 0.0000 Enhancer - Distance chr9:16576182-16576285
CTCFSMARCA4
GH09J016597 - None 0.0000 Enhancer - Distance chr9:16597252-16597534
FOXA2
GH09J016620 - None 0.0000 Enhancer - Distance chr9:16620801-16621791 -
GH09J016622 - 9:16625063:T:C 0.8225 Enhancer Elite Distance chr9:16622984-16629264
CREB1CTCFPOLR2ARAD21IKZF2MTA2EP300RXRAATF7ATF2JUNDCEBPBASH2LPOLR2ATCF7L2TRIM28SIN3ATAF1GATA2SP1TCF12FOSJUNDSMC3SMARCA4CEBPBFOSL2RAD21FOXA1ESR1BHLHE40RCOR1POLR2ABHLHE40EP300USF2FOSUSF1JUNDRCOR1NR3C1RESTSIN3AMAFKSMARCA4RAD21YY1CHD1
GH09J016651 - None 0.0000 Enhancer - Distance chr9:16651561-16651801
CTCFPKNOX1EP300CTBP1
GH09J016652 - 9:16654038:C:A 0.6060 Enhancer Elite Distance chr9:16652622-16654432
RXRATBL1XR1YY1RAD21SMARCA4FOXA2HNF4AFOXA1SP1TAF1SKIGATA2PKNOX1EP300HNF4GNR3C1NANOG
GH09J016662 - 9:16662937:C:T 0.0315 Enhancer - Distance chr9:16662785-16663111 -
GH09J016663 - 9:16664761:A:G 1.1203 Enhancer - Distance chr9:16663836-16665009 -
GH09J016666 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr9:16666624-16666993
SPI1
GH09J016668 - 9:16670301:C:T 1.7511 Enhancer - Distance chr9:16668291-16670332
STAT3FOS
GH09J016670 - 9:16671471:C:G 1.4674 Enhancer Elite Distance chr9:16670968-16672193
FOXA2CTCFMEF2BIKZF1RCOR1YY1SMARCA4JUNDDPF2ZNF217TBX21STAT3CEBPBBMI1FOSARID3AMTA2
GH09J016673 - 9:16673831:G:A 1.8965 Enhancer - Distance chr9:16673236-16675035
ATF2
GH09J016679 - None 0.0000 Enhancer Elite C-HiC,Distance chr9:16679453-16679971
ATF2ATF7MXI1EP300RAD21RCOR1
GH09J016680 - 9:16681023:C:T 0.8184 Enhancer Elite C-HiC,Distance chr9:16680529-16682132
TRIM28GATA2RCOR1RAD21EP300
GH09J016682 - 9:16682691:T:C 3.1086 Enhancer - C-HiC,Distance chr9:16682314-16684267
CEBPB
GH09J016688 - 9:16689293:C:T 1.0622 Enhancer Elite Distance chr9:16688632-16689932
MAFKFOXA1ZNF263
GH09J016693 - 9:16693971:G:C 0.6315 Enhancer - Distance chr9:16693369-16694084 -
GH09J016702 - 9:16705990:CAG:C 2.0886 Promoter/Enhancer Elite Distance chr9:16702064-16706874
GATA2FOXA1CTCFTBPPOLR2ACTCFSIN3AEP300NR3C1ASH2LTAF1SP1ETS1ELF1TRIM28PKNOX1TCF12ZBTB33TCF7L2GABPAEP300JUNDCTBP1CEBPBBCL3FOXA1MAFKNR3C1RESTSTAT3KDM1AFOSSIX5GATA2TBPRAD21JUNATF3RCOR1HDAC2NR2F2ESR1MAFFMYCUSF2FOSL2SMARCA4NANOG
GH09J016707 - 9:16711289:T:C 2.4445 Enhancer Elite Distance chr9:16707318-16712079
TBPCTCFTAF1C11orf30ZNF316SIN3AMAFKSP1BACH1RAD21TCF12NANOGRBBP5MAFFSMARCA4ASH2LCEBPBSMC3CTCFCHD7SP1NANOGEP300TCF12HDAC2ASH2LMTA2TBPTAF1RESTSP1SMARCA4TCF12EP300BHLHE40
GH09J016712 - 9:16713080:A:C 0.9906 Enhancer Elite Distance chr9:16712764-16713289
ASH2LRAD21
GH09J016713 - None 0.0000 Enhancer - Distance chr9:16713921-16714113 -
GH09J016715 - 9:16715748:T:C 0.9873 Enhancer - C-HiC,Distance chr9:16715615-16715798
CTCFEP300
GH09J016717 - 9:16718268:G:T 1.1607 Enhancer - C-HiC,Distance chr9:16717571-16719416
EP300CTCF
GH09J016719 - 9:16721122:G:A 1.5729 Enhancer Elite Distance chr9:16719532-16722533
POLR2AFOXA1FOSPOLR2ACTCFEP300NR3C1ESR1CEBPBMAFK
GH09J016724 - 9:16723228:G:C 0.1581 Enhancer - Distance chr9:16723137-16723359 -
GH09J016723 - None 0.0000 Enhancer Elite Distance chr9:16723796-16724029
FOS
GH09J016725 - 9:16727448:T:A 2.6250 Promoter/Enhancer Elite Distance chr9:16725681-16728518
GATA2EZH2CTCFRAD21SMC3CBX2GATA2EP300BCL3YY1TRIM28TCF12POLR2ARESTTBPTAF1HNRNPLLELF1ASH2LZNF263L3MBTL2ATF3SIN3AMYCUSF2FOSJUNDCEBPBNR3C1RAD21STAT3RBBP5SP1TAF7NANOGGABPAPHF8CHD1SMC3FOSSTAT3CBX2POLR2ATAF1CTCF
GH09J016730 - None 0.0000 Enhancer - Distance chr9:16729346-16729524 -
GH09J016729 - 9:16729961:C:A 0.0939 Enhancer Elite eRNA_co-expression,Distance chr9:16729800-16730000
SIN3AFOSASH2LPOLR2AEP300
GH09J016731 - 9:16730260:C:T 0.3837 Enhancer Elite Distance chr9:16730128-16730622
ASH2LSMARCA4
GH09J016755 - 9:16756025:C:A 0.7567 Enhancer - Distance chr9:16755902-16756052 -
GH09J016768 - 9:16768709:A:G 0.7606 Enhancer - C-HiC,Distance chr9:16768244-16769643
ASH2LEGR1KDM1AYY1RAD21HDAC2EGR1NANOGSP1CHD7RBBP5RAD51USF2USF1
GH09J016772 - 9:16773136:G:A 0.2300 Enhancer - C-HiC,Distance chr9:16772794-16773206 -
GH09J016794 - 9:16796254:T:G 1.3091 Enhancer Elite Distance chr9:16794082-16796343
NFYBUSF1USF2BHLHE40FOSEP300CEBPB
GH09J016803 - None 0.0000 Enhancer Elite C-HiC,Distance chr9:16803479-16804042
EP300PKNOX1GATA3USF1GATA2
GH09J016806 - 9:16806696:G:C 1.0738 Enhancer - Distance chr9:16806332-16807912 -
GH09J016808 - 9:16809710:A:G 0.5792 Enhancer Elite C-HiC,Distance chr9:16808776-16811902
CTCFRAD21KDM1AHDAC2MAFKCHD7NANOGASH2LJUNRAD21POLR2ASP1YY1SRFJUNDNANOGTAF1EP300TBPMAFKBCL11ATCF12
GH09J016811 - None 0.0000 Enhancer - C-HiC,Distance chr9:16811924-16812763
SMARCA4
GH09J016816 - 9:16817235:A:G 0.8503 Enhancer - C-HiC,Distance chr9:16816629-16817732 -
GH09J016824 - 9:16824923:G:C 0.5446 Enhancer Elite C-HiC,Distance chr9:16824122-16827440
GATA1CTCFRFX1RAD21SMC3JUNDRAD21BHLHE40SMARCA4RCOR1JUNDFOSSMC3CEBPB
GH09J016827 - 9:16828963:C:T 0.6619 Enhancer Elite C-HiC,Distance chr9:16827952-16829746
NR2F2RAD21EP300BMI1RFX1NR3C1CTBP1RCOR1ESR1PKNOX1ZFXASH2LTBPSMARCA4
GH09J016832 - 9:16833222:C:T 0.6127 Enhancer - Distance chr9:16832747-16834129
RXRA
GH09J016854 - None 0.0000 Enhancer - Distance chr9:16854632-16854706 -
GH09J016864 - 9:16865788:G:A 0.7896 Enhancer Elite eQTLs,Distance chr9:16864307-16865898
CTCFEP300RAD21JUNDCEBPBRAD21
GH09J016866 - 9:16870474:A:G 0.8341 Promoter/Enhancer Elite eQTLs,eRNA_co-expression,Distance chr9:16866383-16872592
EP300ZNF384CTCFEBF1RESTFOSCTCFPOLR2ASIN3AJUNDEP300BHLHE40USF2RAD21NR3C1CEBPBCTCFPKNOX1EP300RBBP5EZH2RESTPOLR2ATBPSIN3ACHD1EP300YY1ASH2LMXI1ESR1CTCFSIN3AKDM4ARBM39BHLHE40ZFXPOLR2ASPI1SP1RAD21PHF8TAF1TCF12ESR1HDAC2USF1CTCFPOLR2AEZH2SIN3ATAF1BHLHE40CHD1HDAC2SPI1EP300TBPMXI1RESTFOSGATA2RAD21
GH09J016884 - 9:16884575:C:T 1.0886 Enhancer Elite eQTLs,Distance chr9:16884384-16886013
SMARCA4SPI1MAFKEP300SMARCA4FOSCEBPBSTAT3NFE2L2ATF2
GH09J016917 - 9:16917324:G:C 0.1492 Enhancer - C-HiC,Distance chr9:16917258-16917518 -
GH09J016963 - 9:16964832:C:T 0.9656 Enhancer - Distance chr9:16963527-16965195
RAD21JUNDFOSCEBPBMAFKNFE2L2BHLHE40