Regulatory Elements for CACNA1A

Full Name: calcium voltage-gated channel subunit alpha1 A

Location: chr19:13206442-13624489

Date: 2026-02-22 20:12:30

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH19J013011 Promoter/Enhancer 794 Elite eRNA_co-expression chr19:13011599-13028789 ENSR19_553M9C, ENSR19_553MJX, ENSR19_976GT, ENSR19_B4KQP, ENSR19_553NP3, ENSR19_976K2, ENSR19_553NX3, ENSR19_553NZ6, ENSR19_B4KR8, ENSR19_B4KRC, ENSR19_553PK3, ENSR19_B4KRN, NFIX_1, NFIX_2
EZH2SUZ12RNF2KDM4AHNRNPLKDM1APOLR2AL3MBTL2ZFXAGO1HDAC2POLR2GMAXAGO2CTCFNRF1E2F6ZBTB33CBX1RELBFOSTCF12ZBTB33CHD4POLR2ASETDB1GABPB1E4F1ZNF143RBFOX2CTCFEP400ZHX2L3MBTL2KDM1AMNTXRCC5TCF7L2ZNF592ZSCAN29SMARCA4POLR2GATF3HDAC1JUNDARID1BSP1ESRRADPF2MYCMAXSKIFOSHNRNPLCREMC11orf30TCF7NR2C1NR2F2TBX3NR2F6ZBTB2HDAC2ZNF316CBFA2T2BCOREP300HES1MGANCOA1MYNNZBTB7ANR2F1RBM39NFE2L2USF2MAFKJUNZBTB33HNF4AFOSL2NRF1BHLHE40FOSL1RXRAGATAD2AHNF4GNFE2HNRNPLLMITFNCOR1TFAP4E2F6SMARCE1ZNF384E2F7CBFA2T3CTCFRBM39SP1EGR1TAF15POLR2AZFXARID1BHDAC1ZBTB7AGATAD2AZBTB33HNRNPLTCF12ZFP91YY1EGR1CTBP1RNF2GATAD2AMLLT1L3MBTL2MAXBHLHE40ARID1BZNF592ZBTB33MGAMNTMYCMAXE2F6SMARCA4RNF2DACH1EGR1ZNF384NCOA1UBTFKLF16NRF1IKZF1XRCC5PRDM10POLR2AIKZF1CHD1CTCFEGR1PHF8RNF2ZFXZBTB33CTBP1KDM5BIKZF1POLR2AUBTFCHD1SP1NCOA6RNF2CHD7EP300RBBP5JUNDTCF12GABPASP1ZNF143EGR1POLR2ATCF7L2YY1ATF2ATF7CTCFJUNDSUZ12POLR2ARBFOX2CTCFRNF2HNRNPLZNF384PHF8HNRNPKZNF143TCF12POLR2ANCOR1BRD4HNF4AAGO2HNF4GSIN3AASH2LYY1EP300MAFKSP1POLR2GMAFFNFICCREMGATA4HNRNPH1XRCC5RBM39HDAC1SKIMAXRXRACTCFGATA1ZHX2TBPNR2F2RAD21SAP30ZZZ3KDM1ASOX13CCAR2RBFOX2RCOR1PTBP1ZSCAN29NRF1EP400RFX5KDM4ANBNNEUROD1ZNF384EEDJUNDHDAC2CC2D1ACTBP1MNTMLLT1PKNOX1FOXK2KDM5BATF3IKZF1MYCIKZF2ARNTPRDM10GABPB1HES1ZNF24ZNF318MYNNAFF1ZBTB33GMEB1CHD1ZBTB5ARID1BZBTB2GATAD2AMTA1DPF2MTA2SMARCC2NUFIP1TRIM24EHMT2ASH1LBHLHE40MXI1BCORNFXL1L3MBTL2MCM7ZNF184PCBP1RLFZNF639TAL1MGAZEB2SMARCA4ZBTB40NCOA1RESTE2F6NFATC3TCF12ARID2EGR1PYGO2TAF1SMARCE1ZNF384PCBP2SUZ12POLR2GEGR1RBFOX2AGO2BMI1MAXZBTB33ZNF263PCBP1POLR2AHNRNPLCTCFZFXRBFOX2HNRNPLHDAC1POLR2ACHD4HNRNPUL1CREMASH2LKDM1AGABPARAD21EP300MAXRXRASP1HNF4AFOXA2FOXA1NR2F6JUNDATF3HNF1AEGR1ETV4TAF1TBX3TFAP4ZHX2TBL1XR1YY1SOX13GATA4ARID3ATCF7CEBPBSKIZNF24HDAC2CTCFMNTETS1NCOR1RESTCCAR2FOXP1ELF1ZBTB7ARCOR1FOSL2FOXK2LCORL
GH19J014205 Promoter/Enhancer 632 Elite TF_co-expression chr19:14205399-14208066 ENSR19_C3F3K, ENSR19_B4S5B, ENSR19_55C7XW, ENSR19_B4S5F, ENSR19_C3F3Q, ADGRL1_1
RBFOX2KDM1AZNF444EZH2PRDM10SMC3EP300RAD21GATAD2BPOLR2ANRF1ZFXL3MBTL2CTCFZBTB40EGR1E2F6IKZF1BHLHE40PHF8POLR2AFIP1L1RBM39POLR2GSMARCA5RBFOX2MXI1BACH1ZBTB7AGATAD2BPCBP1RBM25MYCHNRNPLLYY1CREB3L1PRPF4NRF1BHLHE40EGR1RFX5ELF1CTBP1ZNF282MTA1EP400SP1ZNF24DPF2RESTATF7RUNX3SIN3AARNTMNTEP300RELBSOX6FOXM1RAD21MAXRB1JUNDZNF207CREME4F1GATA3SMARCE1NFIBNCOR1IKZF2NUFIP1ZSCAN29ZBTB40SMC3RUNX1ESRRAMTA3L3MBTL2LEF1ZNF217NEUROD1TBX21XRCC5E2F6ZNF574STAT1GMEB1KDM1ANFRKBSKILSMARCC2NCOA6TRIM22CC2D1AZFXTRIM24ATF3BRD9MLLT1ZBTB2ZNF639PHF21APKNOX1NBNTCF12HES1ZNF407TBX3CLOCKNCOA1CHAMP1ARID1BZNF444AFF1NR3C1ZNF184E2F8PRDM10ELF4BCORSMARCA4CDC5LTAL1MIER1MTA2ASH2LHDAC3ATF2ZNF318E2F1ATF4ZBTB5GABPB1NFATC3FOXK2SKILHDAC1TRIM28CREB1NR2F1DEAF1ZBTB33ZEB2POLR2GZEB1HDAC2KDM4BPHB2NEUROD1RCOR1GATAD2ARLFRFX1SMC3RFX5MYNNSTAT3SIN3ABMI1RNF2RAD51PHF21ATCF12ZFP91PYGO2KDM1ANUFIP1TBX3HDAC3PKNOX1NFIC
GH19J013729 Promoter/Enhancer 572 Elite eQTLs chr19:13729476-13732572 ENSR19_97G5S, ENSR19_8DWB3, ENSR19_97G68, ENSR19_B4PKN, CCDC130_1
NFRKBFOXA1ZNF639MAFKC11orf30ZNF592ZNF316NFE2L2NFE2ZFXGATAD2AZBTB33SMARCA5E4F1ZBTB40POLR2AHMBOX1MEF2BMTA3DPF2GATA1IKZF1NFATC3ZEB2TBPTCF12SMARCE1CBFBEP400ZNF217JUNDATF3ATF2NBNSP1BRD9ATF7MTA1SKILGATAD2BSMARCA4TCF7KDM1AFOSLEF1HDAC2RCOR1ETV6TRIM22NEUROD1EP300ARID1BNCOR1JUNBBCL3MEF2CMEF2AHDAC3CUX1CBFA2T3E2F1NFICIKZF2PAX5ZNF318RNF2MLLT1NR2F2STAT3ARID3AFOXA1JUNGATA2MYCEEDFOSL2RUNX3BRD4TBX21RUNX1DACH1MTA2BATFMCM7MAFFCREMSMARCC2ESRRAFOSL1NFE2NFRKBSRFMEIS2RELBPKNOX1BHLHE40CHD1TAL1TEAD4IRF4ZNF384GATAD2APOLR2GCEBPBNR2F1TBL1XR1ASH2LHDAC1BCL11AZBTB7ANRF1RBFOX2GATA3RESTRFX1GABPAFOXA2SMARCA5MNTYY1TAF7CBX3SOX6MAXTAF1AGO1FOXK2SIN3ARBM39ZBTB40SOX13ZNF207CTBP1MXI1MBD2XRCC5U2AF2TAF15KLF5CTCFCHD4HNF4AZNF143BMI1KDM5AHNRNPLLRAD21PMLSIN3BRB1RBM22USF1HCFC1USF2ZNF687ZNF639SUZ12SRFKDM4APHF8SMAD5GATA4L3MBTL2E2F6SIX5ZBTB2AFF1ZSCAN29KDM5BZNF24BCOR
GH19J013864 Promoter/Enhancer 514 Elite eRNA_co-expression chr19:13864066-13866839 ENSR19_5593J7
SIN3AGATAD2BNR2F6RXRAEZH2MNTMAXMLLT1IKZF1IRF3L3MBTL2CTCFSKIZNF687BACH1SUZ12BHLHE40EGR1ZBTB7AEZH2YY1CTCFZFXPHF8TCF7L2NRF1ZNF687SKIPOLR2AIKZF1GATAD2BSIN3AETV4SUZ12TFAP4ZFP91NBNMLLT1EP300PKNOX1CREB1BCL3
GH19J013505 Promoter/Enhancer 482 Elite eQTLs,Distance chr19:13505746-13507731 ENSR19_B4ND3, ENSR19_97CQC, CACNA1A_1
POLR2APHF8SIN3AASH2LEZH2SMC3MXI1YY1KDM4ACTCFCHD1EZH2RAD21TAF7POLR2AYY1TBPTAF1RESTASH2LPHF8USF1USF2
GH19J013632 Enhancer 355 Elite TF_co-expression,Distance chr19:13632412-13634079 ENSR19_B4P3D
TRIM28KDM1ANFIBPKNOX1SIX4HNF4GETS1TFAP4EP300SMARCA4MAFFMAFKETV6HDAC2MLLT1ZNF512BHES1MTA2ZKSCAN1E4F1TRIM22ZBTB5ZBTB33SUZ12PLRG1ARHGAP35IRF5FOXK2
GH19J013206 Enhancer 304 Elite eQTLs,Distance chr19:13206801-13211446 None
CTCFGABPAGATAD2BDPF2ZNF687BHLHE40IKZF2ZNF444MLLT1NFICSKILPKNOX1NFXL1NFATC3IKZF1ZNF143ATF2FOXK2TRIM22TBL1XR1JUNBATF7MXI1RELBZNF263EP300BHLHE40NBNEBF1TBX21SPI1MEF2BBCL11AMEF2CBATFRUNX3CTCFMTA2MEF2APOLR2ATCF12MAXPAX5IKZF2EEDZBTB33RUNX3ZNF143EBF1EBF1GMEB1MNTKDM1AMAX
GH19J013621 Enhancer 279 Elite eQTLs,Distance chr19:13621046-13622068 ENSR19_B4NZP, ENSR19_557HMQ
CTCFYY1MITFCREMGABPASTAT3FOSL2JUNDFOSRAD21BACH1ATF3BHLHE40RCOR1NFE2L2USF1JUNRESTMAFKUSF2
GH19J013276 Enhancer 273 Elite Distance chr19:13276766-13277800 ENSR19_B4M5W, ENSR19_555BM6
SIN3ANRF1CTCFRBM39ZNF263RELBTRIM28MAXNBNZNF217SMARCA5CBX1CHD4RB1KDM1AZNF639BHLHE40XRCC5SKILRBM25ZBTB33BCORPTBP1RCOR1RAD21JUNZNF143CTBP1HDAC2ATF7MEIS2CREMSMC3HDAC1TRIM22ARID3AZNF384YY1RAD51NCOA1ESRRAZNF24IRF4FOXM1ZNF207ZNF444RESTTCF12TBX21POLR2AZMYM3SRFSKIIRF1CEBPBZFXMYBELF1MTA3RUNX3
GH19J013234 Enhancer 263 Elite Distance chr19:13234400-13235256 ENSR19_7R2BZ
ZNF24CTCFMNTSMARCA4EP400ZFP91ATF7GATA3L3MBTL2ARID1BDPF2SMARCE1ESRRAMGAIKZF1GABPAZNF579CTBP1MTA3E4F1NCOA1NFICEGR1GABPB1RESTMYCHDAC1ZNF263E2F8ARNTXRCC5SOX6RNF2CC2D1AELF1ELK1SP1ZBTB7ACBX3TAF7SIN3BBHLHE40JUNZNF143EHMT2TEAD4POLR2ASTAT3RAD21PHF20MLLT1SMC3SMARCA5MAXJUNDCREMATF3HCFC1TRIM22RB1EEDETV4ZBTB40GMEB1ZNF444ELF4CBX1
GH19J013396 Enhancer 263 Elite Distance chr19:13396206-13397065 ENSR19_97BKD
L3MBTL2EP400MGAYY1RXRAMNTZBTB33CTCFDPF2MAXSP1GABPB1ATF7RAD51EP300NR2F1GABPAZNF282HDAC1ATF3EGR1SMAD1ZNF507NR2F2CEBPBE2F6USF2HNF4GBHLHE40RAD21FOXK2USF1SIX5AFF1FOSZNF217JUNDZBTB40RESTZEB2CTBP1MYCELF4HNF4ANFE2HCFC1SIN3ASUZ12MITFELF1ELK1ZNF143PRDM10E4F1ETS1IKZF1CBFA2T3ZFP91TCF12TAL1CBFA2T2FOXM1ARID1B
GH19J013260 Enhancer 261 Elite Distance chr19:13260598-13262200 None
ZBED1ASH2LRBBP5MTA3TBX21TRIM28ATF2ZHX2RELBNR2F6RAD51CBFBTRIM22FOSCBFA2T3TCF12NFATC3GATAD2BZNF507ARID3AMNTEP300ATF3FOSL2CTBP1MEIS2SKILRNF2CTCFETV6MEF2BELF1TBL1XR1RCOR1ZNF687ZNF217JUNDBHLHE40IKZF1MITFUSF1JUNBDPF2USF2BMI1ATF7POLR2ASPI1TBPCREMJUNZSCAN29PBX3NR2F1PKNOX1POU2F2IKZF2PAX5IRF4SMARCA4CUX1MEF2CE2F1RUNX3MTA2CREB1YY1EBF1NFICARID1BBATFSMARCE1FOSL1EEDMEF2ABCL11ARAD21SMC3YY1CTCF
GH19J013215 Enhancer 257 Elite eQTLs,Distance chr19:13215126-13216343 ENSR19_8DH98
MLLT1ZBTB33RAD51ZNF384MITFIKZF1POLR2AUSF1NFATC3NFICIKZF2BHLHE40TRIM22RELBATF7NBNCREMARID1BJUNDRUNX3FOSL2FOSBATFATF3USF1PKNOX1
GH19J013398 Enhancer 248 Elite Distance chr19:13398289-13400292 ENSR19_B4MRJ
ZNF830GATA2USF1USF2MAFKFOSRESTCEBPBRAD21YY1SMARCC2DACH1ZSCAN29C11orf30GATAD2BJUNBARID3AATF3JUNDGABPB1E4F1ZNF316MAFKJUNFOSEP300STAT3HDAC1DPF2IRF1ARID1BBACH1MTA2MAFFMYCSMARCA4NFE2ZNF639NCOA1NFATC3ZNF384NFE2L2IKZF1SMARCE1EHMT2CTBP1ZFP91BCORPHF20CBX1KDM1ARBM25PTBP1ZNF830HDAC2ZMYM3SMARCA5
GH19J013589 Enhancer 241 Elite Distance chr19:13589326-13589496 ENSR19_B4NS3, ENSR19_557B5X
CTCFRBM39CUX1SMC3RAD21HNRNPLLATF7HNRNPLNRF1ZNF444XRCC5TRIM22MYNNZNF143YY1MAXZBTB7AZBTB33RESTGABPASTAT1RB1ZBTB40JUNDBHLHE40RXRAZNF384
GH19J013247 Enhancer 202 Elite eQTLs,Distance chr19:13247426-13248201 ENSR19_978ZC, ENSR19_5555LB
CTCFCTBP1HDAC2ARID3ATEAD4RESTRUNX3GABPABACH1FOSYY1TRIM22NANOGRAD21SMC3ZNF143NFE2ZNF263EGR1JUNDIKZF1SPI1KDM1A
GH19J013629 Enhancer 161 Elite eQTLs,Distance chr19:13629257-13630488 ENSR19_97F3S
JUNDCREB1MITFATF3FOSBHLHE40STAT3BCL3USF2CEBPBRAD51USF1MNT
GH19J013212 Enhancer 197 - Distance chr19:13212946-13213096 ENSR19_554WLF
POLR2ACTCFNBNZNF444XRCC5RESTTCF12TRIM22ZNF217NCOR1ZNF143HDAC2MAXCBX1TBX21AFF1YY1CC2D1ARB1ZFP91ZNF24PTBP1SMC3JUNDPHF20SMARCA5ZBTB7BZNF263RLFZMYM3RAD21RCOR1BCORKDM1ASP1CHD4RBM25MIER1ZNF207
GH19J013441 Enhancer 194 - Distance chr19:13441966-13442116 ENSR19_97C3G
HDAC2RESTZNF263SIN3AZNF316MIER1XRCC5HDAC1RCOR1HCFC1SAP30EHMT2CHAMP1GABPB1NCOA1ZBTB40MAXUSF1NCOA6MYCZNF143GABPACREMRB1ZBTB33SPI1AFF1
GH19J013672 Enhancer 185 - Distance chr19:13672666-13672796 ENSR19_8DT3H
L3MBTL2GABPB1EP300YY1ZBTB40E4F1CBX5ZNF143EHMT2CHAMP1NR2C1CBX1MITFPHF20ETV6ELF1RESTCREB1MAXATF2NFYBCBFA2T2E2F1USF2E2F8RAD51GABPAATF7HCFC1USF1TRIP13JUNDATF3SPI1CBX3CREMELF4ZNF384
GH19J013278 Enhancer 181 - Distance chr19:13278066-13278256 ENSR19_979B3, ENSR19_555BQX
CTCFTRIM22ZNF384RAD21ZBTB7AXRCC5ZNF263ZNF444YY1NBNCREMCBX1ZNF143CBX5SMC3SMARCA5ZFP91ZMYM3ZNF24KDM1ARBM25RLFRCOR1PHF20IKZF1HDAC2BCORZBTB7BCHD4HDAC1ARNTPYGO2DNMT1PTBP1ASH1L
GH19J013401 Enhancer 171 - Distance chr19:13401526-13401676 ENSR19_97BLR
ZBTB2ZNF592KAT8RNF2MTA3GMEB1IKZF1E4F1CREB3L1ZEB2CBX3ZNF217AFF1ATF7ASH1LMYCHCFC1ELF1MITFIRF1YY1MBD2RBM25TEAD4USF2SUZ12ZNF143CBFA2T2RAD51TBPMAXCREMSTAT5AJUNDSIX5STAT1ELF4ATF3JUNSKILIRF2FOSUSF1POLR2AGABPB1RESTSTAT3
GH19J013604 Enhancer 149 - Distance chr19:13604312-13605514 None
PHF20NFXL1ZNF639ZNF407ZNF512BZBTB2BRD9MTA1NFATC3
GH19J013597 Enhancer 143 - Distance chr19:13597583-13601100 ENSR19_97DPK, ENSR19_557CKW
CTCFSMC3ELF1RAD21ZNF143TRIM22SPI1MXI1POU2F2ARID2CC2D1AWRNIP1CEBPBRESTZNF207
GH19J013603 Enhancer 143 - Distance chr19:13603372-13604128 None
PHF20
GH19J013612 Enhancer 133 - Distance chr19:13612484-13617441 None
RESTCUX1SMARCA4TCF12TEAD4EGR1CBFA2T2CBFA2T3BHLHE40ZNF24CTCF
GH19J013213 Enhancer 131 - eRNA_co-expression,Distance chr19:13213369-13213702 None
CTCFTCF12NCOR1PTBP1SMARCA5ZBTB7BKDM1ASP1CHD4MIER1ZNF207MLLT1ZNF184ZNF316
GH19J013262 Enhancer 130 - Distance chr19:13262486-13262656 ENSR19_55584R
CTCFTRIM22ZEB2GATAD2BARID3ACTBP1RAD21RESTGATA1ZNF143KDM1ASMC3YY1RCOR1TBL1XR1SMARCA5ESRRABCORGATA2ZNF384ZMYM3GATA3RBM25
GH19J013609 Enhancer 126 - Distance chr19:13609306-13612348 ENSR19_B4NX4, ENSR19_557FNT
CTCFTFAP4FOXA2FOXA1RAD21RESTZNF217TCF12EP300RFX1BMI1
GH19J013334 Enhancer 120 - Distance chr19:13334980-13335457 None
CTCFRAD21GABPB1ZBTB40EP400YY1MGAMYCL3MBTL2EHMT2MAXGABPATRIP13
GH19J013409 Enhancer 100 - Distance chr19:13409033-13409178 None
SMC3RAD21RFX1EP300MXI1ATF7ATF2
GH19J013572 Enhancer 99 - eQTLs,Distance chr19:13572842-13575630 ENSR19_5577MC, ENSR19_8DQXZ, ENSR19_5577NZ
EP300CTCFRAD21MAXMYCSMC3USF1REST
GH19J013665 Enhancer 82 - Distance chr19:13665327-13665773 None
MTA2IKZF2TBX21ELF1RUNX3SPI1IKZF1IRF4BATF
GH19J013241 Enhancer 71 - Distance chr19:13241826-13241956 ENSR19_8DHS5, ENSR19_5554K2
CTCFMEF2BTRIM22MYCZNF143EBF1RAD21
GH19J013459 Enhancer 71 - Distance chr19:13459000-13460856 None
POLR2ATAF7BACH1JUNDEP300SP1MAFKEZH2RESTMNT
GH19J013605 Enhancer 56 - Distance chr19:13605807-13606705 None None
GH19J013608 Enhancer 56 - Distance chr19:13608155-13608991 None
C11orf30ZNF316
GH19J013639 Enhancer 56 - eQTLs,Distance chr19:13639577-13642299 None
KDM1AZMYM3RBM25
GH19J013461 Enhancer 36 - Distance chr19:13461626-13461776 None
REST
GH19J013506 Enhancer 36 - Distance chr19:13505546-13505696 None
POLR2A
GH19J013576 Enhancer 36 - Distance chr19:13576891-13578070 None None
GH19J013617 Enhancer 36 - eQTLs,Distance chr19:13617725-13618339 None
ZMYM3
GH19J013627 Enhancer 36 - eQTLs,Distance chr19:13627488-13628854 None
SPI1
GH19J013636 Enhancer 36 - Distance chr19:13636972-13637563 None
FOSJUND
GH19J013486 Enhancer 9 - eRNA_co-expression,Distance chr19:13486478-13486778 None
HNRNPK
GH19J013333 Enhancer 6 - eRNA_co-expression,Distance chr19:13333880-13334119 None None
GH19J013425 Enhancer 1 - Distance chr19:13425306-13425456 None None
GH19J013491 Enhancer 1 - eQTLs,Distance chr19:13491509-13493005 ENSR19_97CL2
CEBPBSPI1
GH19J013646 Enhancer 1 - eQTLs,Distance chr19:13646145-13647564 None
CEBPBNFICCTCF
GH19J013652 Enhancer 1 - Distance chr19:13652906-13653096 None
MYC