Regulatory Elements for CACNA1D

Full Name: calcium voltage-gated channel subunit alpha1 D

Location: chr3:53328963-53813733

Date: 2026-02-22 20:12:36

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH03J053345 Promoter/Enhancer 667 Elite Distance chr3:53345959-53348690 ENSR3_BDKT5, DCP1A_1
CHD1TAF1ZBTB40E2F1POLR2AATF3ATF2ATF7CREB1JUNDFOXA2HNF4AIRF1NR2F6EP300SAP30EGR1SIN3AZMYM3KDM5ARBFOX2ZFP91CTCFHNRNPKZFXPOLR2GPHF8ASH2LPOLR2AYY1GABPB1CHD1CBFBHDAC2RELBEZH2ZBTB40RESTEP300HDAC1AGO2TAF1MLLT1TAF9BSMAD1C11orf30SMAD5PMLMXI1ZNF263TBPTCF7L2ZNF579EHMT2TAF7GABPACDC5LSMARCE1RBBP5ELF4ZNF316SOX13KDM1AKDM5BMNTGATA2ZNF282TRIM28PRPF4MTA2ZBED1GATA1IRF1MEF2BIKZF1PCBP1ZNF574NCOR1NFATC1PRDM10ZBTB7ACBX1CREB3L1E4F1IKZF2RBM22RCOR1U2AF1PTBP1NFATC3MAFKNBNFOXM1SREBF1ZBTB33MAXLEF1MYCSP1ARNTNRF1ZNF639NR2C1BCORTBL1XR1L3MBTL2MAFFMGAZNF217WRNIP1CBX2TFAP4HCFC1ZNF24TRIM22ZBTB11FOSL2ZNF444RFX5RNF2FOSGATA3CHAMP1CBFA2T3TAF15ZNF687STAT2HNRNPLLELK1EP400MBD2BMI1ATF7HNRNPUL1POU2F2SKILGATAD2BNFRKBTBX3KDM4AEEDELF1CBX3FUSZEB1JUNRAD21ETS1FOXA2NR2F1ATF2PHF20BACH1ETV4MTA1MTA3GATAD2ACUX1NEUROD1SMARCA4HNF4ASTAT1GMEB1CREB1PKNOX1ARID3ATRIM24XRCC5ZKSCAN1ESRRATEAD4HDAC3SMC3JUNDE2F8ZBTB2ZBTB7BE2F1NFE2ZHX1RBM39ZNF143SETDB1FIP1L1CREMNCOA1PHF21ACBX5TCF12FOXK2ETV6BHLHE40CCAR2ZEB2UBTFSIX5EGR1NR3C1MEIS2IRF3TCF7RBM25KDM4BIRF2MYNNSREBF2BCL3ZSCAN29RFX1HSF1RXRABRD4TAL1MEF2APAX5RUNX3CTBP1NFIBZMYM3FOXA1USF1ZNF592CEBPBZNF384NFE2L2BATFSRFU2AF2BRCA1ZHX2ZNF207USF2ZNF512BSIN3BKLF5RLFNANOGSMARCA5RB1MEF2CE2F4DPF2PBX3HNF4GSKINFICSTAT5ATHAP1E2F6IRF4SOX6MLLT1EP300PRPF4ZBTB33
GH03J053492 Promoter/Enhancer 520 Elite Distance chr3:53492723-53495000 ENSR3_5GKPH6, ENSR3_5GKPHP, ENSR3_BDLMC, ENSR3_83KGKL, CACNA1D_1, CACNA1D_2
EZH2TAF15CTCFASH2LTAF1NANOGPOLR2AZFXEP300RAD21RBM39SIN3ASP1MXI1RBBP5ZEB1HDAC2MNTCTBP1SMC3TCF12FUSHNRNPLLKDM4APHF8YY1EZH2
GH03J053747 Enhancer 302 Elite Distance chr3:53747974-53750825 ENSR3_9RC2B, ENSR3_83KN2S
SMARCA5GATAD2BNFYBETS1NBNNANOGTCF12IKZF1ELF1MTA2NFICETV6SP1CUX1ARNTATF7SKILMEF2BMAXZNF687DPF2RAD51MXI1RELBIKZF2EP300STAT3BHLHE40EEDTBX21ATF2TBPMEF2ASPI1IRF4BACH1POLR2AFOSSTAT3CTCFZNF687IKZF1SPI1EBF1
GH03J053772 Enhancer 300 Elite Distance chr3:53772612-53774410 ENSR3_C7C3T
MLLT1MNTMEF2BZNF687EBF1SPI1IKZF1MXI1POLR2ABHLHE40FOSUSF1USF2MYCEP300CTCFATF2MTA3NFICRCOR1GATA3MAXDPF2TRIM22MTA2EEDRAD51IKZF1ZNF687MEF2BGATA2RUNX3ZNF263ETV6SMAD1ARNTIKZF2RELBSKILELF1NFXL1TBX21ATF7CREMJUNBGATAD2BEP300BHLHE40IRF4NBNNFATC3RB1POU2F2CTCFEBF1PAX5TCF12TBL1XR1CUX1PKNOX1SPI1TAF1FOXK2MLLT1BATFJUNDHNF4A
GH03J053517 Enhancer 290 Elite C-HiC,Distance chr3:53517756-53520554 ENSR3_BDLQW
NR3C1CEBPBNR3C1YY1HNF4ARAD21ATF3JUNDMAXEP300CEBPBRXRASP1TBPGATA3TCF12GABPASIN3ARESTZBTB33ESR1NR3C1FOSFOSL2CREB1ESRRAFOXA1TCF7L2BCL3ELF1ATF4CTCFNR3C1FOXA1CEBPBGATA2GATA3MBD2TBPJUNDRCOR1ESR1FOXA1
GH03J053477 Enhancer 288 Elite Distance chr3:53477525-53480835 ENSR3_BDLK3
ZMYM3ZNF384RESTSREBF1RXRAPOLR2ASIN3AFOSL2USF1KDM1AXRCC5CHD4ETV4TBPRCOR1ATF2ASH2LJUNDTAF1GATA3FOXK2SKIFOXP1CTCFHNRNPUL1ZBTB33SP1FOXA1HNF4GNCOR1RBM22RAD21CREMTBX3ATF3BHLHE40GATA2HNF1AATF7ARID3ASOX13LCORLHDAC2ETS1ATMELF1TFAP4HNF4ANR3C1HDAC1EP300RXRANR2F6TCF7TCF12FOXA2RESTYY1GATA4CEBPBPOLR2GCTCFSP1HNF4AKDM1ASP1HNF4A
GH03J053804 Enhancer 275 Elite Distance chr3:53804144-53808023 ENSR3_83KP7Q, ENSR3_BDNBJ, ENSR3_5GMP53
PKNOX1CTBP1FOSL2ESRRARFX1FOSJUNDBHLHE40ARNTPOU2F2ZNF263NFXL1PCBP1PCBP2ZNF444MAFKCTCFJUNDSIN3ARAD21POLR2AHNF1AIKZF1GATAD2BBHLHE40EBF1
GH03J053350 Enhancer 272 Elite Distance chr3:53350599-53351200 ENSR3_9R6Q6, ENSR3_5GJRXP
RBM25CTCFZNF184MNTSMC3GATA1HDAC2SMARCA4POLR2AGATA3CBFA2T3MTA1NR2F1CTBP1NBNATF7E2F1MYCETV6SMARCC2NR2F6MBD2TAL1ARID1BAFF1TCF12HDAC1CBFA2T2GATA2PHB2SPI1ZKSCAN1MYNNSMAD1HES1NCOR1NCOA1TRIM24NFE2TBL1XR1GABPARCOR1HMBOX1RAD51NR2F2CREMRNF2DPF2MTA2TEAD4KDM1APMLNFICCHAMP1SOX6ZNF282NR2C1PHF21ARAD21RXRAFOXM1RESTKLF16TRIM28SMARCE1STAT5AEP300HDAC3CC2D1AZNF24IKZF1ZNF263
GH03J053354 Enhancer 270 Elite Distance chr3:53354778-53355851 ENSR3_83KCKW
ZNF592E4F1L3MBTL2GATA1ZBTB2GATAD2ANUFIP1CTBP1YY1GMEB1HDAC1SMARCC2HDAC2RNF2ZNF24SOX6SKILMTA2TAF9BDPF2SMARCA4KDM1AKLF16HDAC3PKNOX1GATA2IKZF1ARNTJUNCBFA2T2TRIM24ARID1BCBFA2T3TAL1SMARCE1EP300JUNDATF3TCF12MTA1NCOR1ZEB2MEIS2TEAD4FOS
GH03J053753 Enhancer 229 Elite Distance chr3:53753408-53754554 None
MAXZNF687PAX5ZNF316BACH1ELF1MTA2NFE2NFE2L2SPI1EP300SRFSPI1EP300CTCFRAD21
GH03J053710 Enhancer 226 Elite Distance chr3:53710000-53710600 ENSR3_BDMRK, ENSR3_5GM4L3, ENSR3_5GM4L8
CTCFPOLR2AMXI1RBM39TRIM22SMC3L3MBTL2HNRNPLLRB1RAD21GATAD2BYY1ZNF143MAXSIN3AEP300MYCRUNX3BHLHE40RXRASPI1CEBPBRESTBACH1
GH03J053505 Enhancer 205 Elite Distance chr3:53505769-53507123 None
POLR2ARAD21MAXRESTTAF1NR2F2GABPASP1ATF3FOXA2FOXA1EGR1HNF4AJUNDRXRAYY1ATF2
GH03J053495 Enhancer 153 Elite Distance chr3:53495025-53496473 ENSR3_C7BBQ, ENSR3_5GKPQZ
EZH2SUZ12ZNF444SIN3AASH2LHDAC2SUZ12POLR2ARBBP5IKZF1KDM4AMXI1CTCFMYCUSF1BHLHE40GABPAZEB1
GH03J053525 Enhancer 118 Elite Distance chr3:53525638-53526319 None
ATF2EP300POLR2AE2F1NR2F1
GH03J053497 Enhancer 162 - Distance chr3:53497702-53500205 ENSR3_5GKQFQ
PKNOX1ZFXMAXFOXA2YY1FOXA1CTCFSP1RXRANR2F2HNF4GPKNOX1NR2F6SOX6NR2F1NR2C1RAD21HNF4ASMC3
GH03J053708 Enhancer 137 - Distance chr3:53708000-53708200 ENSR3_BDMR9
CTCFPOLR2AMAXRESTSP1ESR1TAF1TCF12NCOA3MYCNR2F2ZBTB33YY1FOXA1RXRAGABPAHNF4AJUNDATF3FOXA2RAD21EGR1
GH03J053570 Enhancer 121 - Distance chr3:53570245-53571766 ENSR3_9R94S
JUNDESR1GATA3FOXA1ELK1MNTFOSSTAT3JUNCTBP1SMARCE1FOSL2MYCEP300DPF2CTCFMYCFOXA1
GH03J053664 Enhancer 121 - Distance chr3:53664913-53665063 None
ZNF217GATA3GATA2DPF2SMARCE1NCOA3FOSJUNDMYCSMARCA5ZNF24ESR1CUX1PKNOX1FOXA1CTBP1MBD2
GH03J053775 Enhancer 121 - Distance chr3:53775681-53776865 None
YY1MYCSTAT3RXRAFOSFOXA2HNF4ASP1SP1EGR1HNF4AATF3RXRAMAFKMAFF
GH03J053327 Enhancer 117 - Distance chr3:53327951-53329543 ENSR3_83KC28, ENSR3_83KC2L
NRF1POLR2ASPI1FOSSTAT3STAT3FOSARID1BNCOR1DPF2HDAC2GATA1POLR2ATRIM24CBFA2T3TCF12RCOR1CBFA2T2TAL1CEBPBTEAD4
GH03J053423 Enhancer 111 - Distance chr3:53423097-53423783 None
FOSATF3TBL1XR1JUNDRXRASKIFOSL2HNF4AATF2
GH03J053631 Enhancer 111 - Distance chr3:53630713-53630903 ENSR3_9R9Q6
ZNF217CTBP1PKNOX1DPF2FOSSMARCE1FOXA1
GH03J053768 Enhancer 105 - Distance chr3:53768834-53769881 None
RELBFOXK2ATF7IKZF1MEF2BGATAD2BZNF687EBF1ELF1RESTEBF1
GH03J053730 Enhancer 99 - Distance chr3:53730400-53731053 ENSR3_9RBS4
USF2USF1
GH03J053765 Enhancer 99 - Distance chr3:53765822-53766882 None
NRF1TRIM24PKNOX1CTBP1EP300ATF4ATF3CTCFRAD21
GH03J053320 Enhancer 82 - Distance chr3:53320513-53321534 ENSR3_9R6FH
NR3C1CTCF
GH03J053613 Enhancer 82 - Distance chr3:53613081-53613843 ENSR3_83KK58
YY1IKZF1DPF2IKZF2ELF1SPI1EP300
GH03J053630 Enhancer 82 - Distance chr3:53630133-53630263 None
DPF2CUX1GATA3SMARCE1FOXA1ESR1
GH03J053680 Enhancer 82 - Distance chr3:53680153-53680303 ENSR3_9RB9G
MXI1RFX1EP300RFX5RESTSMARCA4
GH03J053743 Enhancer 71 - Distance chr3:53743541-53745031 ENSR3_83KMX6
CTCFPKNOX1TCF12RAD21MYC
GH03J053776 Enhancer 71 - Distance chr3:53776931-53777918 None
SP1EGR1HNF4AATF3MAFFSPI1
GH03J053794 Enhancer 71 - Distance chr3:53794665-53795280 ENSR3_83KP28
ATF2ATF7JUNDFOS
GH03J053725 Enhancer 61 - Distance chr3:53725630-53725928 None
MNTGATA3
GH03J053534 Enhancer 50 - Distance chr3:53534015-53534273 None
EZH2GATA2RCOR1
GH03J053524 Enhancer 36 - C-HiC,Distance chr3:53524070-53525147 None None
GH03J053732 Enhancer 36 - Distance chr3:53732747-53733408 None
IKZF1NFATC3GATAD2B
GH03J053762 Enhancer 36 - Distance chr3:53762749-53764053 None
CTCF
GH03J053764 Enhancer 36 - Distance chr3:53764194-53765206 None
CTCFPOLR2AEP300BHLHE40
GH03J053767 Enhancer 36 - Distance chr3:53767437-53768302 None
EBF1HNF4A
GH03J053809 Enhancer 36 - Distance chr3:53809845-53810689 None
AGO2POLR2A
GH03J053825 Enhancer 13 - eRNA_co-expression chr3:53825929-53826175 None
SRFJUNB
GH03J053689 Enhancer 6 - Distance chr3:53689641-53690009 None None
GH03J053371 Enhancer 1 - Distance chr3:53371000-53371200 ENSR3_83KCX5
FOXA2FOXK2FOXA1
GH03J053673 Enhancer 1 - Distance chr3:53673193-53673263 None
EP300
GH03J053707 Enhancer 1 - Distance chr3:53707400-53707600 None
EP300
GH03J053759 Enhancer 1 - Distance chr3:53759179-53759675 None
PKNOX1
GH03J053783 Enhancer 1 - Distance chr3:53783791-53784812 None None
GH03J053795 Enhancer 1 - Distance chr3:53795313-53795403 None
FOS