GWAS Annotated: CCDC149

Gene: coiled-coil domain containing 149

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
CCDC149GH04J024729-None0.0000Enhancer1-C-HiCchr4:24729793-24729807--
CCDC149GH04J024730-4:24730345:G:A1.3121Enhancer56-C-HiCchr4:24730126-24731406ENSR4_B6WHX
POLR2AEP300CTCFJUNDZBTB40
CCDC149GH04J024777-4:24778391:C:A0.6461Enhancer56-C-HiCchr4:24777804-24779424ENSR4_C4GDF
EP300CTCFEP300JUNDFOSSIN3ASTAT3CEBPBRCOR1RAD21BHLHE40MAFKSPI1
CCDC149GH04J024805-4:24805203:T:C0.1758Enhancer71--chr4:24805178-24805328ENSR4_9CSSG
FOXA1CTCFEP300GATA3NFE2
CCDC149GH04J024849-4:24850999:A:G0.6369Enhancer91-Distancechr4:24849794-24852376ENSR4_9CTBD, ENSR4_9CTBM, ENSR4_9CTC3
KDM1AFOSL2YY1JUNDFOSRAD21FOS
CCDC149GH04J024855-4:24856573:C:T0.9261Enhancer210EliteDistancechr4:24855994-24859032ENSR4_9CTDC, ENSR4_9CTDQ
NFICCBFBDPF2ATF2TBX21RELBCREMEP300IKZF1CBX5RUNX3PAX5BCL11APOU2F2TCF12EEDBATFIRF4ETV6JUNBIKZF2JUNDUSF2SPI1SMARCA4FOSEP300JUNDRAD21EZH2
CCDC149GH04J024868-None0.0000Enhancer56-Distancechr4:24868038-24868188-
PAX5USF2TCF12USF1EP300
CCDC149GH04J024911-4:24913196:C:G1.1076Promoter/Enhancer542EliteeQTLs,C-HiC,eRNA_co-expression,Distancechr4:24911648-24913600ENSR4_C4GQ4, ENSR4_57T7P5, ENSR4_B6XHC, CCDC149_1
CTCFASH2LCLOCKMNTZNF592POLR2AKDM1AZNF687ZEB1TAF1RESTMAXSP1YY1MYCSIN3ANRF1RAD21SMC3CTBP1TBPMTA1ZFXCHD1KDM4ASMARCA4RBM39TCF12RBBP5EP300PHF8FOXA1EGR1ZNF316ZNF143USF2EP300
CCDC149GH04J024923-4:24924563:C:T1.9325Enhancer1-C-HiC,Distancechr4:24923836-24925255ENSR4_B6XJZ
FOSCEBPBBHLHE40JUNDUSF2MAFK
CCDC149GH04J024927-4:24927327:G:A0.1609Enhancer46-C-HiC,eRNA_co-expression,Distancechr4:24927220-24927386-
SPI1
CCDC149GH04J024973-4:24975048:A:G0.1541Enhancer273EliteeRNA_co-expression,Distancechr4:24973030-24975200ENSR4_B6XS5
ZBTB40FOXA1FOSMYCSP1ZFXCTCFZHX2HNF4ARXRACEBPBPOLR2AFOXA1YY1ELF1SPI1POLR2A
CCDC149GH04J024975-4:24975608:A:G0.5727Enhancer1-eQTLs,Distancechr4:24975600-24975800-
EP300HNRNPK
CCDC149GH04J024978-4:24980190:A:G0.3131Enhancer287EliteeQTLs,eRNA_co-expression,Distancechr4:24978468-24980600ENSR4_8PSDC, ENSR4_9CWNW, ENSR4_9CWP2, ENSR4_8PSF6, ENSR4_57TMBG, ENSR4_8PSF9
POLR2ASPI1EP300GABPAZBTB40SP1GABPB1IKZF1MAXGATA2NR2F2FOSPOLR2AEP300RCOR1STAT3SPI1TAF1JUNDCTCFEZH2SMC3RAD21ZNF444XRCC5RESTTRIM22FOSZNF143ZBTB40KLF16YY1JUNDPHF21AIRF1EP300
CCDC149GH04J025002-4:25002766:A:G0.0676Enhancer36-C-HiCchr4:25002600-25002801-
CTCFGATA2EP300STAT3
CCDC149GH04J025013-4:25013965:C:T0.4602Enhancer56-C-HiCchr4:25013686-25014900ENSR4_9CX3T
SPI1EP300PKNOX1SPI1
CCDC149GH04J025081-4:25082618:C:T0.7270Enhancer1-C-HiCchr4:25081869-25082681ENSR4_8PWL7
NANOGZNF316
CCDC149GH04J025088-4:25088413:A:C0.5867Enhancer178-C-HiCchr4:25088400-25089000ENSR4_B6ZFP
MXI1RAD21EP300SMC3MEIS2RNF2CTCFEZH2NRF1MAXPKNOX1KDM1AKLF16BHLHE40MEF2ATBL1XR1EGR1HDAC3SKILCREB3L1E2F6NFICMYCGMEB1SMARCE1IKZF1NCOR1SMARCA4SOX6RLFHDAC2ATF7CTBP1ZBTB7AARID1BCBFA2T3TCF12TRIM24HDAC1RFX1RCOR1ZNF282DPF2TEAD4STAT5ATAL1BCORC11orf30ZNF316
CCDC149GH04J025133-4:25132047:G:A0.2590Enhancer36-C-HiCchr4:25132038-25132208ENSR4_8PXN4
NANOG
CCDC149GH04J025132-4:25133948:T:C0.3020Enhancer99-C-HiCchr4:25132336-25134007-
ASH2LKDM1ACREMSP1FOXA2TCF7FOXA1
CCDC149GH04J025153-4:25156333:A:C0.4790Enhancer192-C-HiCchr4:25153405-25156410-
HNF4AYY1KDM5ANCOR1KDM1AHNRNPUL1ZBTB33POLR2AHNF4AGABPACREMYY1ATF3RXRAARID3ASP1HNF1ARESTTAF1ETV4RAD21EP300HDAC2FOXA1MAXCEBPBHNF4GJUNDFOXA2ELF1RBFOX2POLR2GASH2LRFX1CEBPB