GWAS Annotated Elements: CDH13

Gene: cadherin 13

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH16J082584 - 16:82585061:C:G 0.7175 Enhancer - C-HiC,Distance chr16:82584714-82586112
RCOR1MAFKUSF2CEBPBFOS
GH16J082605 - 16:82606961:C:T 0.4222 Enhancer - C-HiC,Distance chr16:82605824-82607226
KDM1ACHD7HDAC2RBBP5NANOGCTCFYY1ZNF143SP1EP300USF1
GH16J082626 - 16:82634790:C:T 1.4479 Promoter/Enhancer Elite eQTLs,eRNA_co-expression,Distance chr16:82626395-82636735
EZH2RNF2EZH2SUZ12POLR2AASH2LTAF1KDM4ATAF1CTCFRAD21SMC3SUZ12RBBP5EP300SIN3APOLR2ASMARCA4FOSSTAT3RAD51USF1FOSPOLR2ACTCFSTAT3RESTJUNDCTCFRAD21SMC3FOSFOXA1CTCFYY1FOSZNF143RAD21SMC3STAT3FOSPOLR2ACTCFFOSSMARCA4MYCGATA2JUNDSTAT3SMARCA4RUNX3
GH16J082636 - 16:82640197:A:C 1.2340 Enhancer Elite Distance chr16:82636918-82641196
ATF2CREB1JUNBJUNDFOSATF7GATA2BHLHE40MAFKNFE2L2BATFSTAT3EBF1CEBPBCTCFYY1SP1RXRARESTZNF444HNF4GNR2F6SMC3TRIM22HNF4AZNF143RAD21SRFFOXA2FOXA1IRF4ARID3AXRCC5CTCF
GH16J082644 - 16:82644270:C:T 1.4155 Enhancer Elite Distance chr16:82644115-82644749
ASH2LNANOG
GH16J082648 - 16:82649846:C:T 1.4070 Enhancer - C-HiC,Distance chr16:82648852-82650078
FOS
GH16J082650 - 16:82651054:C:T 0.3956 Enhancer Elite C-HiC,Distance chr16:82650915-82651065
EP300RUNX3
GH16J082651 - 16:82651258:A:G 1.3085 Enhancer Elite C-HiC,Distance chr16:82651218-82658096
EP300ZNF143ZNF207CHD4IKZF1EEDELF1MLLT1NFICNFYBPOLR2ANFYAIKZF2IRF3RCOR1ATF7TBL1XR1TBPIRF4EP300SPI1E2F4CREMDPF2SMC3ZBTB40RFX5RESTMEF2BSRFBHLHE40ZNF687CREB1ASH2LRBBP5MTA2SMARCA5ZBED1BMI1CBFBARID3ARUNX3TCF12ZNF592CEBPBPKNOX1MEF2AEEDBCL11APBX3ATF4SPI1ZNF24NR2F6FOXA2FOXA1TAF1CEBPBMLLT1IKZF1STAT3POLR2AASH2LSRFNBNIKZF2BMI1RELBMTA2ZSCAN29RUNX3NFICEEDGATAD2BGABPATBPTAF1JUNDKLF5ZBED1RCOR1MEF2BUSF2BHLHE40CBX5SP1ATF3TBL1XR1FOSL2EP300TCF7SIN3ABCL3EBF1ATF7ARNTBACH1ZNF217ATF2IRF4ARID3AJUNBMTA3ELK1FOSTRIM22ZNF143YY1PAX5MYCNFE2L2MEF2CETS1BATFGATA2STAT5ACBFBTBX21CREMSKILJUNSTAT3DPF2CEBPBPOU2F2BCL11ANFATC3RAD21TCF12ELF1RESTETV6SMC3NFATC1MEF2APKNOX1POLR2ASRFFOSTRIM28CEBPBIKZF2STAT5APKNOX1NFATC1CBFBGATA2ETV6EEDJUNDBCL3POU2F2RESTRUNX3NFICSIN3AATF2TBL1XR1ATF7RCOR1MEF2CSTAT3TAF1PAX5TCF12MEF2ABHLHE40BCL11ARAD21CREMJUNBBATFCTCFEP300JUNDSTAT3FOSCEBPBATF4GATA2
GH16J082659 - 16:82659859:C:T 1.1974 Enhancer Elite C-HiC,Distance chr16:82659634-82662182
NFICRUNX3PKNOX1SRFCTCFPOLR2A
GH16J082671 - 16:82672166:C:T 1.8155 Enhancer - Distance chr16:82671795-82675236
CTCFZNF143SMC3RAD21FOSEP300EP300JUND
GH16J082682 - 16:82683395:C:A 0.9890 Enhancer - Distance chr16:82682631-82683598
NR2F2
GH16J082693 - 16:82694526:C:G 0.2565 Enhancer - Distance chr16:82693841-82695300
ATF7ATF2MAFKJUNDFOS
GH16J082698 - 16:82700459:T:C 3.3116 Enhancer Elite eQTLs,C-HiC,Distance chr16:82698973-82702276
ATF3YY1SP1JUNDTBPATF7STAT3FOSEP300FOXA2FOXA1CEBPBMYCBHLHE40RUNX3EBF1MTA3NFICBHLHE40GABPABCL3CEBPBSPI1RUNX3JUNDGATA2BATFFOSMEF2ANR2F2CEBPBMNTUSF1NFYB
GH16J082734 - 16:82734394:G:A 0.5051 Enhancer Elite eQTLs,Distance chr16:82734003-82737111
EP300IRF4CBX5MEF2ABATFRESTNFYBPKNOX1PBX3BHLHE40CUX1MEF2AEBF1MEF2B
GH16J082747 - 16:82748324:T:C 0.8136 Enhancer Elite eQTLs,Distance chr16:82747611-82748576
CTCFSMC3RAD21
GH16J082756 - 16:82756103:T:C 0.0971 Enhancer - Distance chr16:82756000-82756801
CTCFMAFKJUNDFOSPOLR2AGATA2BHLHE40
GH16J082760 - 16:82761164:C:T 0.7384 Enhancer Elite Distance chr16:82760953-82762261
RXRASP1FOSEP300YY1ATF3JUNDHNF4ACEBPBJUNDGABPAHNF4AHNF4GMAXEGR1SP1RXRA
GH16J082776 - 16:82777249:A:G 0.4307 Enhancer - Distance chr16:82776115-82777323
MNTEP300SPI1CREB1ATF2STAT3CEBPB
GH16J082781 - 16:82783658:A:G 0.8823 Enhancer Elite Distance chr16:82781800-82783761
POLR2AHDAC2RAD21SP1EP300RXRATCF12NANOGMAXHNF4A
GH16J082858 - 16:82858156:T:C 1.4060 Enhancer - Distance chr16:82858115-82858225 -
GH16J082866 - 16:82867939:T:G 0.6964 Enhancer - Distance chr16:82866683-82868928
JUNDFOSATF7ATF2
GH16J082874 - 16:82874923:A:G 0.2839 Enhancer - Distance chr16:82874715-82874985 -
GH16J082888 - 16:82888845:T:C 0.4649 Enhancer - Distance chr16:82888314-82889316
TRIM28EP300ZNF263RESTRAD21
GH16J082924 - 16:82924512:C:G 0.8457 Enhancer - Distance chr16:82924455-82924585
TRIM28ZNF263
GH16J082936 - 16:82936363:A:C 0.8560 Enhancer - Distance chr16:82936328-82938025
RESTPOLR2ABHLHE40EP300FOSGATA2JUNDMAFKNFE2L2
GH16J082944 - 16:82946225:G:A 1.0707 Enhancer - Distance chr16:82944804-82946565
POLR2AMAXGATA2NR2F2RAD21FOSATF7
GH16J082946 - 16:82946626:C:A 0.0839 Enhancer - Distance chr16:82946575-82946673 -
GH16J082990 - 16:82991680:C:T 1.7050 Enhancer - eQTLs,Distance chr16:82990870-82994533
ZFXSPI1MNTMAFKZNF316MAFFC11orf30CTCFZFXSMARCA4REST
GH16J082994 - 16:82995103:T:G 1.2972 Enhancer Elite Distance chr16:82994970-82996924
GATA2RAD21NR2F2JUNDEP300YY1FOSTAF1NFE2L2CEBPBCREB1CTBP1CTCFIRF5MCM3ATF7ARNTHDAC2RAD51NCOA4
GH16J083053 - 16:83054166:T:A 0.8679 Enhancer - Distance chr16:83053895-83054768
FOS
GH16J083095 - 16:83096402:A:G 1.5498 Enhancer - Distance chr16:83095635-83096806
RXRAHNF4ACEBPB
GH16J083100 - None 0.0000 Enhancer - Distance chr16:83100855-83101005
MYCEBF1SRFJUNBSTAT3FOSCEBPB
GH16J083102 - None 0.0000 Enhancer - Distance chr16:83102915-83103266 -
GH16J083136 - 16:83137950:C:T 0.6217 Enhancer Elite Distance chr16:83136955-83138289
ETV4NR2F6NR2F2RCOR1JUNDMAXSKITCF7TBX3MYCFOSMAFFFOXA1XRCC5RXRAFOXA2EP300FOSL2TFAP4
GH16J083143 - None 0.0000 Enhancer - Distance chr16:83143895-83144125
RCOR1FOSBHLHE40
GH16J083187 - 16:83187542:G:T 0.4168 Enhancer - Distance chr16:83187495-83187645
FOSSTAT3JUNDCEBPBBATFMAFK
GH16J083215 - 16:83215665:G:C 0.0333 Enhancer - Distance chr16:83215515-83215665
CTCFXRCC5RAD21ZBTB33SMC3KLF16ZNF143RB1RXRARESTYY1EGR1NANOG
GH16J083304 - 16:83305560:C:G 1.0002 Enhancer Elite Distance chr16:83304994-83306118
FOSJUNDRCOR1CEBPBGATA2USF1
GH16J083306 - None 0.0000 Enhancer - Distance chr16:83306156-83306188 -
GH16J083336 - 16:83338200:A:AC 0.5867 Enhancer - Distance chr16:83336087-83340168
MAFKFOSMAFFGATA2POLR2ATBPSTAT3MYCJUNDSMARCA4RAD21POLR2ASMARCA4GATA2NFE2L2FOSNRF1
GH16J083343 - 16:83343596:A:C 0.4444 Enhancer - Distance chr16:83343186-83345383
ESRRAPOLR2ARCOR1GATA2MAFKBHLHE40JUNDATF2FOSSTAT3EP300MYCCEBPBCREB1
GH16J083402 - 16:83403688:G:T 0.4987 Enhancer - Distance chr16:83402368-83404613
CTCFRAD21FOSSTAT3EP300RAD21RFX1JUNDSTAT3FOSJUNDMYCSTAT3NFE2L2FOS
GH16J083447 - None 0.0000 Enhancer - Distance chr16:83447050-83447128
CTCFRAD21SMC3FOXA1ZNF143ZNF384
GH16J083512 - 16:83513423:G:A 0.9774 Enhancer - Distance chr16:83512664-83513914
ATF3GATA2FOSJUNDJUN
GH16J083529 - 16:83530762:C:G 0.9062 Enhancer - Distance chr16:83529855-83531304 -
GH16J083573 - 16:83574713:C:T 0.6104 Enhancer - Distance chr16:83573900-83575182
CREB1MAFKMAFFFOSJUNDMYCSTAT3BHLHE40CEBPBCREB1ATF2
GH16J083602 - 16:83603523:A:C 0.3540 Enhancer - Distance chr16:83602431-83603578
CHD7HDAC2YY1
GH16J083648 - 16:83648404:G:T 0.1151 Enhancer - - chr16:83648395-83648545
MNT
GH16J083653 - 16:83653444:GT:G 0.8888 Enhancer - - chr16:83653192-83654149
EP300SMC3ZBTB40
GH16J083676 - None 0.0000 Enhancer - - chr16:83676175-83676325
ZNF24SMARCA4
GH16J083682 - 16:83682457:T:C 0.7369 Enhancer - - chr16:83682220-83682644
CREB1
GH16J083688 - 16:83689906:C:T 0.5073 Enhancer - - chr16:83688955-83690072
PKNOX1IKZF1CBFA2T3KDM1ATAL1TEAD4NR2F2ATF4CBFA2T2FOSBHLHE40MEIS2JUNDATF2EEDATF3MYCEP300RCOR1BCL11AARID3ASTAT3JUNMEF2AHDAC1MEF2CRUNX3BATFHES1JUNBCEBPBATF7SRF
GH16J083699 - None 0.0000 Enhancer - - chr16:83699095-83699245 -
GH16J083701 - 16:83701510:C:T 0.2052 Enhancer - - chr16:83701435-83701585
RESTMIER1HDAC2RFX5AFF1GATAD2ACHAMP1EHMT2RCOR1MYCSIN3ACBX3CREMZNF143
GH16J083705 - 16:83706574:T:A 1.3812 Enhancer - - chr16:83705536-83707333
RBM25YY1
GH16J083717 - 16:83718169:A:T 1.4989 Enhancer Elite - chr16:83717245-83718787
CTCFRESTZNF143ZKSCAN1RAD21FOSRXRA
GH16J083726 - 16:83727752:A:G 0.5251 Enhancer Elite - chr16:83726800-83727925
HMBOX1RESTCEBPBSPI1EP300
GH16J083732 - None 0.0000 Enhancer - - chr16:83732495-83732863 -
GH16J083743 - 16:83743660:T:A 0.0703 Enhancer - - chr16:83743398-83743780
ATF2ATF7KDM1A
GH16J083744 - 16:83744333:T:C 0.7235 Enhancer Elite - chr16:83744250-83745215
EP300MAFKETS1MAFFFOSFOSL2RAD21SP1JUNDCTCFTBX3RXRAMAXSPI1
GH16J083747 - 16:83747257:T:A 0.2557 Enhancer - - chr16:83747052-83747389 -
GH16J083756 - 16:83756566:A:T 0.3491 Enhancer - - chr16:83756458-83756843 -
GH16J083762 - 16:83762650:G:A 0.6191 Enhancer - - chr16:83762380-83762660
ZFXFOXA1
GH16J083768 - 16:83769555:T:A 0.6717 Enhancer Elite - chr16:83768824-83770388
RFX1SRFFOSASH2LGATA2MAFKSPI1NANOGEGR1SP1SRF