GWAS Annotated Elements: CH25H

Gene: cholesterol 25-hydroxylase

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH10J088281 - 10:88283017:G:T 1.0407 Enhancer Elite eQTLs chr10:88281308-88283114
MAFKCEBPBFOSL2MYCFOSSTAT3SIN3AFOSL2JUNDFOSMYCSPI1RAD21EBF1
GH10J088936 - 10:88937112:G:C 0.8258 Enhancer - C-HiC chr10:88936911-88937663
ETV6POLR2ACTCFMAFKMAFF
GH10J088939 - 10:88937938:T:C 0.7671 Enhancer - C-HiC chr10:88937816-88938793
MAFKMAFF
GH10J088946 - 10:88946996:G:GT 0.1640 Enhancer - C-HiC chr10:88946988-88947555
EP300
GH10J088948 - None 0.0000 Enhancer - C-HiC chr10:88948684-88949393
CREB1POLR2AHNF4APOLR2AEP300
GH10J088949 - 10:88951986:G:A 0.7807 Promoter/Enhancer Elite eQTLs,eRNA_co-expression chr10:88949907-88954174
CEBPBSPI1ATF3NR2F2POLR2ACTCFZNF263RESTTAF1EP300ESR1YY1JUNDRXRAMAXRAD21SRFHNF4ASP1NR2F2MYCFOSMXI1NR3C1CEBPBRCOR1GATA2SIN3AESR1GATA3USF1EP300POLR2AJUNDTAF1RCOR1SIN3AEP300SP1NR2F2EP300L3MBTL2SPI1
GH10J088988 - 10:88996754:T:C 0.9948 Promoter/Enhancer Elite C-HiC chr10:88988928-88997555
SP1HNRNPKZNF143MEF2BMTA2EBF1PKNOX1TBX21PBX3CTCFJUNDATF7MAXHNF4AATF2TFAP4ATF3GABPASP1POLR2AFOSGATA2EP300MYCTBPCREMCEBPBSTAT3CTCFTAF1ZNF143RBM22NBNMTA2YY1ETV6DPF2PCBP1RELBRXRAATF2SP1IKZF1SRFGATA3NR3C1PAX5SMC3STAT3TBL1XR1ARNTEBF1EZH2CBFBSAP30MXI1SPI1ASH2LBACH1BHLHE40IKZF2RUNX3PKNOX1ZBED1SMAD5HNRNPLMLLT1FOSSMARCA5RESTZBTB33SIN3APBX3MAXIRF4ATF7POU2F2CHD1HNF4ARBFOX2CTCFMEF2BTCF12UBTFPHF8CEBPBETS1ZNF207RBM39KDM4AZFXMYCE2F6GATAD2BAGO2HNRNPLLZNF263L3MBTL2ARID3ACTCFIKZF2TAF15SMC3ZBTB7AEP300BACH1EGR1CHD1ETV6PAX5ATF2SPI1ETS1CREMMAFKNRF1ELF1DPF2EBF1POU2F2ZNF687JUNBGATA3RESTSKILZNF384TBPSRFRAD21SMAD5TRIM22NFATC3FOSSTAT3BATFWRNIP1CHD4RUNX3MLLT1NBNZBED1FOXA1NFICSMAD1ASH2LYY1TAF7L3MBTL2NFYBMAFKE2F4SIN3BGATA1MAFFZNF24ZBTB33HDAC2CBFBSMARCA5MXI1RCOR1KDM1ABCORBHLHE40FOXA1RESTZMYM3RELBGATA3BRCA1FOXM1ZNF143SPI1ZNF217RUNX3TBX21RBM25SKILTRIM22ZNF687ARNTBACH1SKILCUX1NFYBWRNIP1IKZF1MAFKRELBMYCMAFFTRIM22POLR2AEP300RAD51MEF2BZBTB40PAX8MLLT1NBNCBFBIKZF1POLR2ATBX21ZNF217SMARCA5DPF2TRIM22IKZF2NFATC3SMAD5RB1SKILSMAD1PKNOX1ZNF687E2F8BACH1TAF1RELBTBPZSCAN29ELF1EBF1TCF7EP300ATF7MEF2AMTA2BCL11ASRFPOLR2ATBPTCF7ZNF687IKZF1GATAD2BBHLHE40FOSGATA1WRNIP1MLLT1ZBTB33POLR2ARAD51MXI1MTA2POLR2ATBX21ELF1RUNX3SPI1ATF7ATF2
GH10J088999 - 10:89002108:T:C 0.3181 Enhancer Elite C-HiC chr10:88999178-89002970
POLR2AZBTB40EBF1STAT3FOSCEBPBMLLT1POLR2AEEDPKNOX1RUNX3BATFZNF384IKZF1CEBPBNR2F2ATF3ATF4RFX1IKZF2EEDNFICTCF12RUNX3
GH10J089020 - 10:89020107:G:T 0.0604 Enhancer - C-HiC chr10:89020103-89020253 -
GH10J089029 - 10:89030250:G:A 0.4401 Enhancer Elite C-HiC chr10:89029712-89030281
CTCFHNF4AZNF263MTA2HNF4GYY1SKILIKZF2TRIM22TBX21RAD21PKNOX1ZNF143IRF4SMC3PBX3FOXA1SIN3ARESTEP300
GH10J089030 - 10:89032211:A:G 0.7128 Enhancer Elite C-HiC chr10:89030990-89033219
EBF1CTCFNFICATF2NFATC1NBNATF7RUNX3FOSL2SMC3ARID1BFOSIKZF1JUNDPOU2F2MAFKMAFFRELBEP300BCL11ANFE2L2TBX21BACH1C11orf30NFE2GATA2STAT3MYCSPI1DPF2MTA2ZNF316CEBPBNR3C1NFATC3MLLT1CTCFRAD51MAFKMAFF
GH10J089065 - None 0.0000 Enhancer - C-HiC chr10:89064763-89064913
EP300CTCFSP1NR2F2
GH10J089064 - 10:89065085:G:A 0.6258 Enhancer - C-HiC chr10:89064923-89065113
EP300CTCFSP1NR2F2
GH10J089086 - 10:89087812:C:T 0.9896 Enhancer Elite C-HiC,eRNA_co-expression chr10:89085727-89088072
NFRKBBRD4CTCFATF4ATF3NANOGCTBP1TCF12ATF7EP300STAT3ATF2TBPTRIM24CEBPBJUNDMEIS2ESRRAFOSRESTCBFA2T2RAD51L3MBTL2MAXSOX6POLR2AZNF318SMARCA4BHLHE40MITFUSF1USF2RBFOX2RBM25
GH10J089100 - None 0.0000 Enhancer - C-HiC chr10:89100803-89100953
CEBPBEP300
GH10J089102 - None 0.0000 Enhancer - C-HiC chr10:89102828-89102872 -
GH10J089117 - 10:89118139:G:A 0.8249 Enhancer - eQTLs chr10:89117541-89118895
JUNDSTAT3FOSBHLHE40
GH10J089122 - 10:89123164:G:A 0.5726 Enhancer Elite C-HiC chr10:89122354-89123905
FOSSTAT3EP300ATF2GATA3ETV6EP300MAXSPI1
GH10J089147 - 10:89147473:G:A 0.1750 Enhancer - C-HiC chr10:89147323-89147890
MYCSTAT3FOSCEBPB
GH10J089151 - None 0.0000 Enhancer - C-HiC chr10:89151903-89152093
CREB1FOS
GH10J089163 - 10:89164501:A:G 1.9562 Enhancer Elite eQTLs chr10:89163263-89164600
IKZF1IKZF2GABPATBX21ZBED1SKILEEDATF7NFICBATFMEF2ACREMETV6NFATC1CTCFRESTETS1RXRAHNF4AJUNBPOU2F2ATF2SP1RUNX3ATF3RAD21STAT3MYCFOSJUNDFOXA2EP300POLR2ASPI1CEBPB
GH10J089171 - 10:89171845:T:C 1.8196 Enhancer - eQTLs,C-HiC chr10:89171756-89173057
FOS
GH10J089203 - 10:89203473:CCA:C 1.9735 Enhancer - eQTLs,Distance chr10:89203383-89203533 -
GH10J089206 - 10:89206789:C:T 1.7854 Promoter/Enhancer Elite eQTLs,Distance chr10:89206443-89208565
EZH2RNF2SUZ12KDM4AMXI1MNTRBM39CTCFRAD21POLR2AMAXEP300SP1GABPAUSF1CBX2SMC3STAT3MXI1NR3C1L3MBTL2CEBPBFOXA1RUNX3HNRNPLLTAF15EEDKDM1AHDAC2POLR2ARBBP5ASH2LIKZF1KDM4ARNF2CREB1ATF2ZNF263
GH10J089226 - 10:89227807:T:G 0.8871 Enhancer - C-HiC chr10:89226729-89228485
MAFKMAFF
GH10J089228 - 10:89229129:A:G 0.0761 Enhancer - C-HiC chr10:89228957-89229457
ZNF143
GH10J089241 - 10:89241369:T:C 0.3892 Enhancer Elite C-HiC chr10:89241002-89243886
GATA1TAL1TEAD4CBFA2T3ARID1BCTCFNFICMEF2BCREMMTA2EBF1RUNX3RELBJUNBSMARCA4BCL11ABATFSKILCHD1HNF4GNR2F2ZNF687HNF4AIKZF1RXRAFOSASH2LMAXSP1EP300SPI1KDM1ACEBPBMYCSTAT3ZNF143MNTFOXA2PKNOX1ZNF384FOXA1USF1TCF7ATF2TBL1XR1MEF2BMTA2IKZF1SP1RELBMEF2ARUNX3BCL11ANFICEP300IKZF2MTA3ETV6EEDETS1NANOGSPI1TCF12JUNB