GWAS Annotated Elements: CHL1

Gene: cell adhesion molecule L1 like

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH03J000196 - None 0.0000 Promoter - Distance chr3:196546-196606
RNF2EZH2SUZ12POLR2AMXI1EP300GATA2EBF1
GH03J000198 - None 0.0000 Promoter - Distance chr3:196713-196773
RNF2EZH2SUZ12POLR2AMXI1EP300GATA2EBF1TBPRAD21IKZF1
GH03J000197 - 3:197562:C:G 0.8531 Promoter/Enhancer Elite Distance chr3:197074-198201
EZH2SUZ12MXI1IKZF1KDM4AGATAD2BBHLHE40ASH2LPOLR2AKDM4ARB1ZNF263CTCFRNF2SUZ12SMC3KDM4ARBBP5MXI1POLR2AGATAD2BBHLHE40BACH1ZNF217IKZF1SMARCA5
GH03J000203 - None 0.0000 Promoter - Distance chr3:203786-203846 -
GH03J000212 - 3:212519:C:T 0.5588 Enhancer - Distance chr3:212477-212627
NFATC3HSF1ATF7RELBELF1IKZF1CREB1MTA2NBNTRIM22RUNX3ATF2ETV6IKZF2MLLT1JUNBCREMBHLHE40EP300PKNOX1DPF2ZNF687SMAD1EEDTAF1TBPTBX21
GH03J000242 - 3:243604:G:T 0.5750 Enhancer - C-HiC,Distance chr3:242857-244193
MAFKTRIM28MAFFNFE2L2FOSEP300STAT3RCOR1FOS
GH03J000244 - 3:244340:A:G 0.5340 Enhancer - C-HiC,Distance chr3:244197-244347
RCOR1FOSCEBPB
GH03J000264 - 3:264907:C:T 0.3266 Enhancer - Distance chr3:264257-265353
HDAC1ZKSCAN1ASH2LSIN3AKDM1ABCL3ATF3GABPARESTFOXA2ZBTB33EHMT2EP300HNRNPLLHNF1AGATA4FOSCREMFOXP1MYCARID3ANR2F6RCOR1TFAP4ETS1ZNF24HDAC2TBL1XR1CEBPBTCF12HNF4ASTAT3SP1NCOR1RXRASMC3FOXA1NR3C1TCF7JUNDSMARCC2FOSL2ETV4ELF1SKITBX3SMARCE1ZHX2SOX13CREB1ATF2MAFKMAFFCBX2LCORLNFICNFIB
GH03J000270 - 3:271776:T:C 0.4022 Enhancer - C-HiC,Distance chr3:270959-271996
IKZF1
GH03J000273 - None 0.0000 Enhancer - Distance chr3:273713-274474
IKZF1IKZF2NBN
GH03J000277 - 3:279644:A:G 0.3444 Enhancer Elite Distance chr3:277548-279710
ETV6IKZF1JUNBZNF592BHLHE40RAD51TBPSPI1IKZF1GATAD2BE2F8RELBMEF2BZNF217SMAD1DPF2IKZF2ARNTTRIM22NFICKLF5NBNMLLT1MTA2SKILJUNBTBX21ATF7EEDBMI1EP300ZNF143RB1BACH1MEF2CEBF1IRF4BHLHE40NFATC3ZNF592YY1BATFPKNOX1BCL11AARID3ACEBPBPAX5SMARCA4TCF12ASH2LTBPCTCFEP300BATFSPI1ETV6EBF1MAFKPAX8ZBTB40IKZF2IKZF1
GH03J000290 - None 0.0000 Enhancer Elite Distance chr3:290157-290307
ZNF384IKZF1SKILNFATC3BMI1NFICBACH1DPF2IKZF2RELBATF7RUNX3MEF2AMTA2EP300SPI1EBF1BATFTBX21ETV6
GH03J000297 - 3:297375:T:C 0.2821 Enhancer - Distance chr3:297208-298125
GATA2
GH03J000354 - None 0.0000 Enhancer - Distance chr3:354477-354627
CTCFSMC3NBNRAD21RCOR1RESTZNF444GATA1TRIM22WRNIP1IRF4ZNF143CBX3GATA2YY1GATA3MCM2SMARCA5RB1FOXA1CBX5
GH03J000355 - 3:355650:G:C 0.1773 Enhancer - eQTLs,Distance chr3:355111-356142
GATA1FOSEP300CEBPBBHLHE40