Regulatory Elements for CKAP4

Full Name: cytoskeleton associated protein 4

Location: chr12:106237880-106304279

Date: 2026-02-22 20:13:59

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH12J106299 Promoter/Enhancer 742 Elite Distance chr12:106299520-106305193 ENSR12_855DCZ, ENSR12_BR4L7, ENSR12_5X248H, ENSR12_BR4LF, ENSR12_CDJRR, ENSR12_5X24MG, TCP11L2_3, TCP11L2_1
GATA1ARID1BPKNOX1NCOR1CBFA2T2TAL1EP300CEBPBZNF592RNF2ARID1BCBFA2T2CBFA2T3TEAD4ATF3SOX6MITFZEB2TFAP4NFE2FOSJUNDFOSL2BHLHE40EP300JUNEP300KDM1AMGAMNTZNF274L3MBTL2CREB3L1NBNNRF1MXI1POLR2ACHD1CTCFTCF12SP1E4F1IKZF2PYGO2SMARCA4ZNF687HMBOX1CBFA2T3FOXA1SKILTBPMTA2DPF2ATF7GATA1FOXA2XRCC5TAF9BARID1BMEF2BTBX21ZSCAN29MTA3TAL1KDM4AFOXK2NCOR1ZNF282SMARCC2SUZ12CHAMP1UBTFARNTSKIMAXSIN3ACTBP1ELF1MYCCBFA2T2ELF4AFF1RELBATF3NFATC3ZEB2NR2F6IKZF1ETV6CBX3RUNX3BMI1E2F8ZNF24RAD51SMARCE1BRD9ESRRAHDAC1NFICZNF579RESTTRIM24ETS1EHMT2ZNF639ATF4HES1MLLT1RNF2TEAD4ZNF318ZKSCAN1SOX6IRF1HDAC2ZNF143E2F7RLFMEIS2GATAD2BMYNNTRIM22PRDM10MBD2ATF2PHF21APMLNEUROD1ZBED1TBL1XR1EBF1LEF1STAT2TCF7STAT1KLF16ZBTB5NCOA1STAT5ABHLHE40NR2F2RCOR1MEF2AFOSL1TRIM28PKNOX1NFE2PHF8EGR1GABPAPHF20RUNX1MITFZNF217HDAC3JUNDFOXM1GATA2GMEB1ZBTB7ABCORZHX1RB1SREBF1NR2F1PHB2MTA1SAP30GABPB1GATAD2ACC2D1ADACH1CREMRBFOX2ZBTB2BACH1SAFBHNRNPLLPCBP1SIN3AFIP1L1CTCFEP300SMARCA4EP400NR2F2KDM5AMNTATF7SPI1RESTNFICPRDM10SP1FOXA1ELF4TAF1MAXMLLT1ARNTELF1FOXA2FOXK2E4F1CHD1ATF3RELBCREMRB1EGR1E2F8NFATC3NBNKLF5YY1BHLHE40GABPARNF2SREBF2FOXP1SKILNCOR1ZNF217PKNOX1HDAC3CLOCKZNF444JUNDJUNTBPGMEB1TBX21CDC5LETV4ASH1LMCM7MEF2BHCFC1TRIM22NFRKBE2F7CREB1MBD2SOX6TBX3E2F1FOSL2ZNF24MXI1POLR2AZNF207TRIM28TBL1XR1SIN3BNUFIP1RUNX3ZNF639BRD9MEIS2IRF1ELK1FOSSREBF1RFX5NR3C1STAT1TCF12TAL1PAX5MYCIRF4ARID3AMAFFDNMT1GATA4RBFOX2SKIMCM2BRCA1SIX5RCOR1ASH2LRXRAZNF143USF1IRF3TFAP4ZBTB40TAF15MTA2NR2F6HDAC1GABPB1GATA3ZBTB5IKZF1TRIM24EBF1ZSCAN29ETS1FOXM1NCOA1MIER1POLR2GSAP30DPF2GATAD2BCTBP1L3MBTL2SMC3ZFP91NR2F1AGO1PHF8UBTFEEDIKZF1KDM4AUSF1AGO2ZFXRBBP5HNRNPLEGR1GATA2SMARCA5PTBP1BRD4SAFBKDM5BMGASMAD1E2F6MTA1MXI1RAD21SOX6ESRRANFICTAF1IKZF2CBX1MAXRFX1SKITBL1XR1BMI1TCF12RXRASP1JUNDNBNELF1MYCTFAP4MNTEGR1ZBTB7ANR3C1STAT3BHLHE40ZNF274RFX5POU2F2FOXA2POLR2AZMYM3
GH12J106244 Promoter/Enhancer 679 Elite Distance chr12:106244812-106250476 ENSR12_BR4B6, ENSR12_BR4B9, ENSR12_93K6LP, ENSR12_93K6LS, ENSR12_5WZPZK, ENSR12_93K6M5, ENSR12_CDJMT, ENSR12_5WZQCP, CKAP4_1
PKNOX1JUNDFOSFOSL2SP1ZNF384DPF2ZBTB33L3MBTL2POLR2ACTCFEP300STAT3TCF7L2MYCCEBPBFOSSTAT3NFE2L2SIN3AEZH2RBM39ZFXHNRNPLLHNRNPLPHF8EP300L3MBTL2TAF1AGO2CTCFPOLR2AZNF263RESTNRF1KDM4ARAD21TCF7L2EGR1HNRNPLLIKZF1ZNF143YY1BHLHE40ARNTGATAD2BSIN3ADPF2ZBTB7ASKIELF1MXI1FOXM1L3MBTL2E2F6MYCMAXZFXHNRNPKSP1RBM39KDM4AMEF2BIKZF2TAF1EBF1MAXRXRAZEB1HNF4AYY1RAD21RESTFOSRCOR1CEBPBZNF579FOXA1FOXA2ZKSCAN1ZNF316CTCFPOU2F2
GH12J106286 Enhancer 456 Elite Distance chr12:106286965-106290007 ENSR12_855D4M, ENSR12_BR4JF
CHD4RESTKDM1AMNTATF3BCL3ASH2LSMARCC2E2F1JUNDHMBOX1ZSCAN29ZNF316HDAC1NCOA2ARID3ASMARCA4BRD4RNF2FOSFOXA2PKNOX1FOXK2ATF4LEF1TAF9BZNF217MAXSKIRCOR1TEAD4JUNBARID1BSP1MYCZEB2ZNF24ZNF318TBPPAX8HDAC3CREB1NEUROD1HNF1AATF7ETS1DPF2FOSL2ATF2HDAC2SMARCE1RBFOX2CREMJUNTFAP4SOX13FOXA1EP300EP400BMI1SOX6TRIM24BHLHE40HSF1STAT3CEBPBMEIS2FOSL1GATA2CBFA2T3SIN3AGATA3YY1SIX5ZNF592BRD9PRDM10L3MBTL2CLOCKZNF687MGANFRKBIKZF1EHMT2EP300TRIM24CEBPBZMYM3
GH12J106073 Enhancer 378 Elite eQTLs chr12:106073416-106085979 ENSR12_CDJ78, ENSR12_BR3F3, ENSR12_CDJ7M, ENSR12_5WXNGQ, ENSR12_93K4SX, ENSR12_93K4T5, ENSR12_CDJ7W
MTA2MEF2BNFICIKZF1RUNX3NBNARID3AATF2RELBTBX21SKILDPF2EP300PAX5BHLHE40TCF12RCOR1JUNBJUNDEBF1IKZF2BCL11AMLLT1STAT3ATF7ZNF217SRFPKNOX1BATFBMI1IRF4ESRRANFATC3MXI1BACH1TBPSMARCA5POLR2ASRFMTA2EP300EBF1JUNDSIN3ARESTPKNOX1TRIM28ZNF263TCF7L2POLR2AGATA2L3MBTL2BHLHE40RCOR1FOXK2ARNTCTBP1RAD21EP300MEIS2ZKSCAN1FOSBHLHE40MYCTCF7L2JUNDATF4ATF2NR2F2RXRASP1EP300USF2USF1CTCFMAFKC11orf30MAFFZNF316NFE2L2JUNDNR2F2NR2F6RXRAUSF1SP1RESTRAD21MAXZBTB33JUNDFOXA1EP300ATF3HNF4ARXRAHNF4GRAD21ZNF263EP300TRIM28GABPABCL3YY1ATF3JUNDFOSL2PKNOX1FOSSIN3ATCF7L2TAF1ESR1NR3C1SP1TCF12CTCFPOLR2ARESTCTBP1RELBIKZF1IKZF2NFICNFATC3ATF2ATF7SKILGABPATBL1XR1MTA2BMI1RUNX3ARID3ATCF12CREMEBF1EP300BACH1IRF4BHLHE40JUNBDPF2JUNDTBX21BATFBCL11A
GH12J105933 Enhancer 332 Elite eRNA_co-expression chr12:105933303-105936823 ENSR12_BR2M5, ENSR12_93K39F, ENSR12_BR2M9, ENSR12_93K39S
YY1TAF1TCF7L2SP1CREB1SIN3ANR3C1FOSRAD21RESTRCOR1TCF12JUNDSMC3CEBPBMYCNFE2L2BHLHE40MAFKSTAT3FOSL2GATA2CTCFFOSCEBPB
GH12J106273 Enhancer 320 Elite Distance chr12:106273832-106275867 ENSR12_93K6WS
TCF7CREMASH2LEHMT2POLR2ATFAP4NR2F6YY1JUNDBHLHE40RESTNCOR1TAF1HNRNPUL1GABPAZBTB33ETV4FOXA2RXRAFOXA1SKITBPATF3MAXRAD21SP1ELF1EGR1ARID3AKDM1AEP300ZNF384HNF4AIKZF1HNF1ABATFEBF1
GH12J106295 Enhancer 301 Elite Distance chr12:106295686-106297209 ENSR12_BR4KJ
SIN3AFOXA1KDM1AARID3ACUX1RFX1GATA3MNTBHLHE40BMI1ZNF217ETS1SP1TBX3FOXA2CREB1TCF12CLOCKMYCSTAT3ATF7JUNDEP300FOSCTBP1USF2FOXA1SMARCE1MAFKESRRAMAFFFOSL2MAFKMAFFZNF316C11orf30
GH12J106345 Enhancer 267 Elite Distance chr12:106345799-106346092 ENSR12_93K7ND, ENSR12_5X2CWL, ENSR12_855FCT
KDM1ACTCFFOSTFAP4XRCC5RESTYY1MAXMYCZBTB33ZNF143RAD21SMARCA5TRIM22SMC3USF2USF1
GH12J106341 Enhancer 257 Elite Distance chr12:106341222-106343961 ENSR12_855F94, ENSR12_BR4S9
JUNDGATA3RCOR1GATA2ZNF316BHLHE40CEBPBSKIHNF4APKNOX1CTCFSP1RAD21RFX1JUNDBMI1FOSFOSL2POLR2AMYCEP300HMBOX1
GH12J106251 Enhancer 206 Elite Distance chr12:106251122-106252365 ENSR12_93K6N6
POLR2ACTCF
GH12J106309 Enhancer 206 Elite Distance chr12:106309219-106310545 ENSR12_BR4MH
POLR2A
GH12J106297 Promoter/Enhancer 156 Elite Distance chr12:106297885-106297945 TCP11L2_2
TAF1SP1RAD21
GH12J106306 Enhancer 133 Elite Distance chr12:106306746-106309108 None
GATA3HNF4AFOXA2FOXA1POLR2A
GH12J106305 Enhancer 125 Elite Distance chr12:106305502-106305975 None
POLR2ASTAT3FOSCTCFCEBPB
GH12J106311 Enhancer 98 Elite Distance chr12:106311200-106312000 None
ATF7
GH12J106283 Enhancer 231 - Distance chr12:106282672-106282692 ENSR12_BR4HJ
CTCFTRIM28ZNF263ZNF217ZNF143TRIM24CBX1NFXL1RAD21SETDB1YY1TRIM22SMC3ZNF280AJUNKDM1ACBX5JUNDFOSRESTRXRAFOXA2ATF3EGR1ZBTB33FOXA1SP1HNF4AMAXEP300HNF1AARID3ANRF1RCOR1TFAP4ETS1ATF7HDAC1ETV4CREB1SKIFOXP1GATA4BHLHE40CREMHDAC2LCORLNCOR1ASH2LMAFKTBX3NR2F6FOSL2HNF4GZBTB7ASIN3ATCF12FOXK2TBL1XR1TCF7
GH12J106282 Enhancer 225 - Distance chr12:106282442-106282652 ENSR12_BR4HJ, ENSR12_5WZZ2Z
CTCFTRIM28ZNF263ZNF217ZNF143TRIM24CBX1NFXL1RAD21SETDB1YY1RB1TRIM22SMC3ZNF280AJUNKDM1ACBX5JUNDFOSRESTCBX3RXRAFOXA2ATF3EGR1ZBTB33FOXA1SP1HNF4AMAXEP300HNF1AARID3ANRF1RCOR1TFAP4ETS1ATF7HDAC1ETV4CREB1SKIFOXP1GATA4BHLHE40CREMHDAC2LCORLNCOR1ASH2LMAFKTBX3NR2F6FOSL2HNF4GZBTB7A
GH12J106284 Enhancer 219 - Distance chr12:106284040-106285576 None
SMARCC2ASH2LEP300KDM1ATBX3NR2F6CREB1HNF1ASKIGATA4FOXA2HDAC2HNF4GRESTARID3AFOXP1TFAP4RXRATBL1XR1HNF4ASOX13ETV4JUNDCREMSMARCE1ETS1TCF7FOXK2FOXA1BHLHE40SP1TCF12GATA2FOSL2PKNOX1MEIS2ZKSCAN1
GH12J106269 Enhancer 164 - Distance chr12:106269262-106269392 None
CTBP1HMBOX1PKNOX1ZNF639SMARCE1SMARCA4ESRRARNF2ZKSCAN1C11orf30TAL1HDAC1TCF12KDM1AJUNDNCOR1ZNF316NFE2NR2F1CUX1MAFFCBFA2T3MAFKARID1BNFICMEIS2DPF2HES1SOX6GATA1HDAC2ZBTB40
GH12J106645 Enhancer 151 - TF_co-expression chr12:106645102-106645272 ENSR12_BR6FZ
EP300ZNF444SKIFOXA2FOXA1SP1KDM1ACTBP1RAD51GATA3MAXLCORLASH2LMYCBHLHE40ZNF217HDAC2USF1HNRNPLCEBPB
GH12J106254 Enhancer 133 - Distance chr12:106254782-106255032 ENSR12_93K6P3
ESR1JUND
GH12J106328 Enhancer 121 - Distance chr12:106328562-106329815 None
RAD51MAXMITFBHLHE40USF1POLR2APKNOX1
GH12J106291 Enhancer 117 - Distance chr12:106291402-106291650 None
MYCFOXA1FOXA2EP300CEBPBFOSSTAT3
GH12J106321 Enhancer 91 - Distance chr12:106321074-106322624 None
BHLHE40C11orf30ZNF316MAFKMAFFMITF
GH12J106336 Enhancer 71 - Distance chr12:106336673-106337246 None
SP1RAD21EGR1HNF4AZNF384
GH12J106272 Enhancer 36 - Distance chr12:106271682-106271832 None
HNF4A
GH12J106315 Enhancer 36 - Distance chr12:106315986-106318083 None
CTCFZMYM3RBM25MYCFOS
GH12J106327 Enhancer 36 - Distance chr12:106327198-106327747 None
TCF12MYNNESR1
GH12J106270 Enhancer 22 - Distance chr12:106270022-106270100 None None
GH12J106280 Enhancer 16 - Distance chr12:106280041-106280399 None
SP1RFX1RAD21MAFK
GH12J106274 Enhancer 6 - Distance chr12:106270320-106270445 None None
GH12J106271 Enhancer 1 - Distance chr12:106271342-106271492 None None
GH12J106294 Enhancer 1 - Distance chr12:106294954-106295527 None None
GH12J106318 Enhancer 1 - Distance chr12:106318261-106318807 None None