GWAS Annotated Elements: COL4A4

Gene: collagen type IV alpha 4 chain

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH02J226968 - 2:226972104:G:C 1.2751 Enhancer Elite Distance chr2:226968853-226972658
JUNDCTCFPKNOX1RUNX3RAD51NBNMNTTCF12BHLHE40
GH02J226972 - 2:226973822:G:A 0.3641 Enhancer - Distance chr2:226972957-226974242 -
GH02J226974 - 2:226974823:C:T 1.0170 Enhancer - Distance chr2:226974410-226975198 -
GH02J226976 - 2:226977076:A:C 0.1040 Enhancer Elite Distance chr2:226976984-226977134
ZFX
GH02J226977 - 2:226979286:A:G 0.2706 Enhancer Elite Distance chr2:226977241-226979424
TBX21MEF2BMTA2NFICCBFBRNF2NFATC3ATF7BHLHE40EP300ATF3JUNBSMARCE1RUNX3FOSZNF384TCF7GATA1TEAD4DPF2JUNDBATFSMARCA4SOX6GATAD2BGATA2MEIS2GATA3NFE2ARID1BKDM1ABCORRBM25MTA3CTCFZBTB7AATF7NRF1ZNF592RESTHMBOX1SMARCA4ARID1BMEIS2GATA1ZNF24RAD21C11orf30MAFKEP300CBFA2T3ZNF143IKZF1NFE2MAFFNFICZNF316DPF2
GH02J226981 - None 0.0000 Enhancer Elite Distance chr2:226981904-226982054
DPF2CREB3L1PMLSMARCE1MYCHDAC1STAT5ANCOR1CBFA2T3ZFXNR2F2EP300GATAD2AARID1BGATA1MTA2TCF12TAL1TEAD4CBFA2T2HDAC2JUND
GH02J226982 - 2:226982216:A:G 0.0648 Enhancer Elite Distance chr2:226982124-226982274
DPF2CREB3L1PMLSMARCE1MYCHDAC1NCOR1ZFXNR2F2GATAD2AGATA1MTA2TCF12JUND
GH02J226984 - 2:226985493:G:C 0.2077 Enhancer Elite Distance chr2:226984040-226985854
TCF12ZBTB33DPF2ZNF687NFICGABPB1EEDZBED1NFATC1ETV6TAF1RUNX3YY1BCL3BCL11AEP300JUNDJUNBCREMEBF1PAX5ETS1RAD21BATFIRF4ELF1SRFTCF7SPI1HNRNPKMEF2BGATA3SMC3GATA2CTCFRAD21IKZF2SP1EP300RB1MAXRXRAMAFKFOXA1TRIM22C11orf30FOXA2ZNF316MAFFARID2ZNF384ETS1HNF4AZNF143REST
GH02J226994 - 2:226995955:G:A 1.6353 Enhancer - Distance chr2:226994768-226996468
CTCFCUX1FOXA1FOXA2GATA3RAD21RFX5FOSJUNBBCL3C11orf30FOSBATFZNF316POLR2ASTAT3MAFKMAFFJUNDREST
GH02J227033 - None 0.0000 Enhancer - Distance chr2:227033464-227033614
CTCFRBM39RAD21RUNX3ZNF143SMC3EP300PRDM10XRCC5RCOR1RFX5
GH02J227083 - 2:227083809:C:T 0.5954 Enhancer - Distance chr2:227083446-227085570
ZNF316
GH02J227107 - 2:227107260:A:G 0.2143 Enhancer - Distance chr2:227107224-227107354
CTCFSMC3RAD21TRIM22XRCC5RESTARID3ACEBPBRUNX3ATF3YY1ZNF384ZNF143
GH02J227153 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr2:227153337-227153549
CTCF
GH02J227155 - 2:227155051:G:A 0.3667 Enhancer - Distance chr2:227155044-227155214
NR3C1
GH02J227156 - None 0.0000 Enhancer - Distance chr2:227155218-227155361
NR3C1CTCF
GH02J227163 - 2:227163765:G:A 0.7075 Promoter/Enhancer Elite Distance chr2:227163516-227165627
EZH2SUZ12POLR2ASIN3ARNF2CTCFPHF8RBBP5KDM4AHNRNPKZEB1MYCL3MBTL2TAF15KDM4AASH2LZNF263MXI1SIN3ACTCFRNF2GABPAETS1CTBP1ARID3ACREB1RUNX3TBPBATF
GH02J227189 - None 0.0000 Enhancer - C-HiC chr2:227188384-227188534
ASH2LNFICFOSL2POLR2ANR2F2GABPARUNX3MEF2ATAF1ETS1EP300
GH02J227188 - 2:227188871:T:C 0.7595 Enhancer - C-HiC chr2:227188709-227189259
ASH2LPOLR2ANR2F2