GWAS Annotated Elements: COLEC12

Gene: collectin subfamily member 12

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH18J000305 - None 0.0000 Enhancer - C-HiC chr18:305060-305210
CTCFFOSEP300
GH18J000314 - 18:314592:C:T 0.9296 Enhancer - C-HiC chr18:314190-315305 -
GH18J000316 - 18:316120:C:T 2.0482 Enhancer - C-HiC chr18:316105-316155 -
GH18J000322 - 18:322226:T:A 1.3207 Enhancer Elite Distance chr18:322126-323291
RNF2CTCFL3MBTL2MNTEP400MTA3NRF1ELF4C11orf30NBNGMEB1ELF1ATF3ZEB2SMARCA4CBX3ZNF316MYCDPF2MTA1UBTFMYNNMBD2ARID3AZNF24CREB3L1NFATC3NFICTCF12SUZ12RFX1JUNBRNF2HDAC1SMARCC2FOXA2RAD21TFAP4IKZF1HDAC3BACH1HCFC1ZNF143ZNF318E4F1ARNTRCOR1TAL1GABPAJUNDRUNX3ZSCAN29MLLT1NR2F1KLF16CBFA2T3BMI1TRIM28SKIFOSSTAT3KDM1AMEIS2NEUROD1NCOA1HMBOX1TRIM24RLFPRDM10SMC3STAT5AARID1BJUNATF7TBL1XR1EP300ATF2MAXESRRARUNX1CTBP1HDAC2STAT1LEF1SMARCE1FOXK2RB1FOXM1NCOR1MAFKFOXA1FOSL1BHLHE40MAFFFOSL2SOX6THRASKILNR2F2BATFNR2F6ASH2LRESTCREMNFE2CBFA2T2TEAD4HES1RAD51RXRAZNF384BCORZFP91HDAC1ZNF282TFAP4HNF4AJUNDSP1RXRAZNF24FOSETS1ATF3
GH18J000323 - None 0.0000 Enhancer Elite Distance chr18:323380-323617
NCOR1ASH2LHDAC1ZNF282TFAP4HNF4AJUNDSP1RXRAZNF24FOSETS1ATF3LCORLRCOR1ARID3AKDM1ASMC3HDAC2TBL1XR1CEBPBJUNFOXA1EP300HNF4GFOSL2FOXA2CREB1
GH18J000331 - 18:331733:G:A 0.7205 Enhancer Elite eQTLs,C-HiC,Distance chr18:331055-333853
SPI1EP300IKZF1CBFA2T3GATA2CBFA2T2CTCFRAD21EP300
GH18J000335 - None 0.0000 Enhancer - Distance chr18:335833-336074
ATF3FOS
GH18J000336 - None 0.0000 Enhancer - Distance chr18:336672-336972
SPI1
GH18J000346 - 18:346821:C:T 0.1708 Enhancer - C-HiC,Distance chr18:346740-346890
MAFKCREB1
GH18J000352 - 18:352095:A:T 0.6915 Enhancer - C-HiC,Distance chr18:352077-356061
MAFFMAFKZNF316C11orf30FOSEP300ATF4
GH18J000360 - 18:362151:G:T 0.8333 Enhancer Elite C-HiC,Distance chr18:360683-365492
C11orf30ZNF316MAFKMAFFFOXA1NR2F6SP1HDAC2EP300ATF2RXRAHNF4GJUNDCEBPBTBPKDM5ASKIRNF2KDM1ACREB1CHD4FOSL2BHLHE40CREMRESTRAD21MAXMNTETS1USF1GATA2ASH2LMAFFARID3ASPI1SMARCA4POLR2GTFAP4SIN3ARCOR1KAT2BNCOR1TCF7EHMT2RXRAEP300CEBPBFOXA2YY1SP1HNF4GFOXA1HNF4ATAF1ETV4HNF1APOLR2AELF1STAT3FOSCEBPB
GH18J000367 - None 0.0000 Enhancer Elite C-HiC,Distance chr18:366050-366159 -
GH18J000366 - 18:366420:TACTA:T 0.0974 Enhancer Elite C-HiC,Distance chr18:366404-366990
CEBPB
GH18J000370 - 18:371281:C:T 0.6222 Enhancer Elite C-HiC,Distance chr18:370572-372277
CTCFSPI1MXI1RCOR1RAD21
GH18J000374 - 18:379749:G:A 0.8446 Enhancer Elite C-HiC,Distance chr18:374390-380600
POLR2ARUNX3POU2F2PAX5EP300EP300NANOGUSF1USF2EP300GABPARESTSPI1ZNF274
GH18J000392 - 18:394141:T:C 0.8704 Enhancer Elite C-HiC,Distance chr18:392525-397290
NFICMAFKNRF1MXI1GATA2GATA3RCOR1TRIM24ATF4ATF3EP300RFX1SIN3ARCOR1BHLHE40MAFKUSF2USF1MXI1BHLHE40TRIM28L3MBTL2MGAMNTFOSGATA3MYCPKNOX1EP300MAXSIN3AGATA2CTBP1YY1JUNDARNTNFE2USF1RCOR1NFE2L2BHLHE40RESTRAD21
GH18J000398 - 18:401128:G:C 1.2182 Enhancer Elite C-HiC,Distance chr18:398274-401183
ZNF217MYCFOXA1PKNOX1SMARCA4RFX1CTCFGABPANRF1EP300FOSBHLHE40NFE2L2MYCUSF2CEBPB
GH18J000405 - None 0.0000 Enhancer - C-HiC,Distance chr18:405240-405390
ZNF444ZNF280ANR2F1NR2C1
GH18J000406 - 18:408688:C:T 1.0595 Enhancer - C-HiC,Distance chr18:406675-408765
NFIBNFICFOSJUND
GH18J000410 - None 0.0000 Enhancer - Distance chr18:410445-410458 -
GH18J000412 - 18:413237:A:C 1.3979 Enhancer - Distance chr18:412870-413817
DPF2SMARCA4ARNTZNF639C11orf30ZNF316FOSBACH1MAFKSOX6PKNOX1NFE2L2MEIS2MAFFNFE2JUNDRBM25
GH18J000415 - 18:416464:T:G 1.9958 Enhancer Elite C-HiC,Distance chr18:415197-417164
HMBOX1RAD21SPI1FOSJUNDCEBPBGATA2IKZF1JUNDMAFKYY1CEBPBATF3
GH18J000417 - 18:417559:T:C 1.4510 Enhancer Elite C-HiC,Distance chr18:417372-418086
RESTEP300
GH18J000420 - 18:421579:A:G 0.5657 Enhancer Elite C-HiC,Distance chr18:420756-422311
FOSJUNDBHLHE40RAD21GATA3JUNDFOSFOSL2
GH18J000423 - 18:423748:GT:G 2.1120 Enhancer Elite C-HiC,Distance chr18:423510-425441
RBM25POLR2ANR2F1IKZF1
GH18J000427 - None 0.0000 Enhancer Elite Distance chr18:427080-427270
RFX1FOSMAFKBCL3C11orf30ZNF316JUNDMAFFNFE2
GH18J000433 - 18:433431:G:A 1.7192 Enhancer Elite Distance chr18:433012-435721
RESTJUNBFOSJUNDATF2ATF7SOX6HDAC1ATF3PKNOX1ZEB2L3MBTL2ATF4TRIM24MEIS2EP300IKZF1CEBPBCTBP1CTCFRAD21
GH18J000446 - 18:447835:A:C 1.4692 Enhancer - Distance chr18:446543-448042
EP300SPI1
GH18J000448 - 18:450102:G:A 1.6828 Enhancer Elite C-HiC,Distance chr18:448860-450250
CTCFPOLR2AGATA3FOXA1EP300MNTMYC
GH18J000452 - 18:452951:A:C 1.2433 Enhancer Elite Distance chr18:452757-453400
SPI1
GH18J000455 - 18:457853:T:G 1.7444 Enhancer Elite Distance chr18:455777-460653
POLR2AEP300CTCFTRIM28GATA2POLR2ARCOR1EP300SMARCA4BHLHE40CEBPBCTCFCTCFEP300
GH18J000463 - 18:464399:T:C 0.6531 Enhancer Elite C-HiC,Distance chr18:463600-464761
POLR2ACTCFEP300SPI1FOSZNF263SPI1
GH18J000468 - 18:469797:C:A 0.4944 Enhancer - C-HiC,Distance chr18:468724-469856
NRF1CTCFSRFRAD21EP300SPI1
GH18J000470 - 18:470983:T:TAA 1.3322 Enhancer Elite C-HiC,Distance chr18:470799-471401
MAFKMAFFZNF316EP300FOSJUNDGABPACEBPBSPI1
GH18J000474 - 18:475155:A:C 0.8644 Enhancer Elite C-HiC,Distance chr18:474372-476749
CTCFZNF263POLR2AKDM1ATAF1SP1ETV4FOSGATA2JUNDSTAT3EP300RESTRXRARAD21FOXA1SIN3AFOSL2RCOR1CTCFFOXA1
GH18J000478 - 18:478521:G:A 0.7748 Enhancer Elite Distance chr18:478041-480352
CTCFRFX1SMARCA4EGR1JUNFOSJUNDFOSL1ESRRAATF3POLR2ANCOR1TFAP4BHLHE40ETV4NR2F6LCORLESRRA
GH18J000489 - 18:490268:A:G 0.6525 Enhancer Elite Distance chr18:489243-490571
ATF3JUNDFOSBHLHE40ZEB2NFE2NFE2L2C11orf30CEBPBUSF1
GH18J000490 - None 0.0000 Enhancer - Distance chr18:490700-490850
REST
GH18J000494 - 18:494532:C:A 1.5797 Enhancer Elite Distance chr18:494171-495575
ZNF263FOSCEBPBUSF1USF2BHLHE40NFATC3BATFBCL11ARUNX3MAFKMEIS2
GH18J000496 - 18:497568:A:C 0.1460 Enhancer Elite Distance chr18:496801-497770
CTCFTRIM28ATF7ATF2KDM1AATF3CTBP1DPF2JUNDRAD21TRIM22GMEB1FOXK2RESTPKNOX1MEIS2SMARCA4YY1SOX6MITFSMC3KLF16JUNZNF143CREMSPI1CREB1ARID1BNFE2ZEB2BCORTAL1ZNF639SMARCA5HMBOX1
GH18J000498 - 18:500297:A:G 0.6366 Promoter/Enhancer Elite Distance chr18:498656-501001
EZH2RNF2SUZ12EGR1L3MBTL2SMARCE1TCF7L2IKZF1MYCGATA3CEBPBMTA1LEF1NR2F1CTBP1KDM1ATEAD4HES1FOXA2USF2TCF7RCOR1GATAD2BFOXA1CBFA2T3HDAC1SOX6BMI1CBFA2T2RUNX1MEIS2CTCFGATA2MAFKBHLHE40RAD21JUNDESRRAPKNOX1ASH2LSMC3RBM39KDM4ABACH1HDAC2HDAC1HDAC6TAF1RAD21POLR2ARBBP5ZNF263RNF2KDM4AL3MBTL2EZH2
GH18J000504 - None 0.0000 Enhancer - Distance chr18:504020-504170
CEBPBRCOR1ZNF217NFIBFOXA1GATA3FOSJUNDMTA1CTBP1SMARCE1DPF2
GH18J000505 - 18:505780:C:A 0.5258 Enhancer - Distance chr18:505660-505810
NFATC3MEF2BATF2ZNF217SKILTRIM22BMI1IKZF1JUNBBACH1MTA2ARID3AEP300IKZF2RAD51ATF7BCL11AJUNDTBX21DPF2BHLHE40BATFRELBEBF1MLLT1
GH18J000515 - 18:516803:G:C 1.0980 Enhancer - Distance chr18:515275-517083
CTCFZBTB33RAD21C11orf30FOSZNF316MAFKMAFF
GH18J000518 - 18:519982:T:G 0.4244 Enhancer Elite Distance chr18:518049-520035
ZBTB33MGAL3MBTL2IKZF1ZNF316CEBPBMYCSMARCE1RELBEP400ZNF639NFATC3ATF3ARID1BCBX3TRIM28POLR2ASMARCC2ARNTDPF2NBNC11orf30HDAC3SOX6MAFKL3MBTL2PHF8FOXK2ATF7NCOR1CHAMP1ZNF316JUNDBACH1TRIM24MTA3MAFFMNTSKILNFE2L2ESRRAPKNOX1BHLHE40MGASMARCA4CTBP1MLLT1EP300NFE2ZNF24NFRKBHDAC1GABPB1MEIS2EHMT2E4F1LEF1ELF1RNF2HDAC2BATFZNF592MAXPHF20ZNF687JUNMEF2BNUFIP1CREMUSF2RAD51USF1EBF1E2F6NFICZBTB33
GH18J000524 - 18:525667:T:C 0.2350 Enhancer Elite C-HiC chr18:524288-525762
RNF2POLR2AARID1BCEBPBSOX6IKZF1PKNOX1MEIS2FOSJUNDATF3GATA2RFX1CTCFRAD21RBM25ZMYM3SMARCA5RLFBCOR
GH18J000567 - 18:567260:T:C 0.1873 Enhancer - C-HiC chr18:567200-567350
FOXA1MAFKMAFFIKZF1
GH18J000572 - 18:572995:A:G 0.5102 Enhancer - C-HiC chr18:572894-576126
KDM1ACREMNCOR1SP1RXRAHNF4AASH2LTCF7CHD4ZMYM3TCF7EP300SP1NR2F6HNF4GRXRAKDM1AFOXA1YY1MAFFMAFKTCF12SP1EP300TAF7USF1
GH18J000576 - 18:580060:C:T 0.4604 Enhancer - C-HiC chr18:576658-580131
NFICNRF1ESRRAYY1RFX5RFX1CEBPBRFX5NRF1ZSCAN29RESTSETDB1ESRRAATF7CREB3L1EGR1NEUROD1