GWAS Annotated: CSMD1

Gene: CUB and Sushi multiple domains 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
CSMD1GH08J002979-8:2980255:A:C1.4584Enhancer36--chr8:2979139-2980587ENSR8_936X5
EP300CTCFEP300
CSMD1GH08J002985-8:2985457:G:C1.4037Enhancer171--chr8:2985273-2985538ENSR8_84CZM
EP400CREB3L1HDAC1MNTSMARCA4RAD51ZNF184ZNF592ZNF24ZBTB33RESTLEF1MAXFOXK2SOX6USF2DPF2L3MBTL2MGACBFA2T2BHLHE40USF1KDM1AE2F6ARID1BMYCCHAMP1CTCFMITFZBTB40RNF2ATF3C11orf30MEIS2PKNOX1BACH1
CSMD1GH08J002986-8:2985781:G:C2.0014Enhancer151--chr8:2985658-2985888ENSR8_936ZX
EP400CREB3L1HDAC1MNTSMARCA4ZNF592ZNF24SOX6DPF2L3MBTL2KDM1AE2F6ARID1BCHAMP1ZBTB40ATF3C11orf30MEIS2PKNOX1BACH1MAFFJUNDMAFKEP300TCF12PCBP1EGR1HNRNPKPCBP2
CSMD1GH08J003097-8:3097596:T:C1.0292Enhancer56--chr8:3097400-3097800-
CEBPB
CSMD1GH08J003102-None0.0000Enhancer1--chr8:3102798-3102828-
EZH2
CSMD1GH08J003111-8:3112395:G:A1.7415Enhancer36--chr8:3111800-3113600--
CSMD1GH08J003147-8:3147208:G:A1.5925Enhancer6--chr8:3147192-3147461--
CSMD1GH08J003148-8:3148531:C:T1.8672Enhancer48--chr8:3148255-3148601-
IKZF1
CSMD1GH08J003150-None0.0000Enhancer9--chr8:3150166-3150180-
EZH2
CSMD1GH08J003243-8:3244848:G:C1.8743Enhancer91--chr8:3243928-3245762-
RBBP5EZH2SP1EGR1EP300TCF12RESTUSF1RNF2EZH2HDAC2SIN3ACHD7SP1EP300TCF12EGR1YY1JUNDNANOGBCL11AUSF1
CSMD1GH08J003395-8:3395146:C:T0.7000Enhancer19--chr8:3395142-3395316--
CSMD1GH08J003414-8:3414145:GA:G0.0124Enhancer13--chr8:3414138-3414231--
CSMD1GH08J003502-8:3502921:A:C2.0551Enhancer56--chr8:3502880-3504068ENSR8_93DJQ
NFICNFIBCHD7
CSMD1GH08J003575-8:3574764:A:T0.4866Enhancer1--chr8:3574678-3574828--
CSMD1GH08J003574-8:3574840:G:A0.0076Enhancer1--chr8:3574831-3575464--
CSMD1GH08J003594-8:3594922:C:A0.5257Enhancer1--chr8:3594589-3596470-
EZH2EZH2
CSMD1GH08J003646-8:3646750:G:C0.6664Enhancer56--chr8:3646718-3646848ENSR8_93G47
CTCFEZH2EP300YY1ZNF143TBPRAD21
CSMD1GH08J003758-8:3758851:T:C1.3100Enhancer1--chr8:3758350-3759730--
CSMD1GH08J003847-8:3848371:A:AT3.1014Enhancer71--chr8:3847527-3851381-
CHD7NANOGBCL11ASP1FOXA2FOXA1HNF4GHNF4ACTCFMAFFMAFK
CSMD1GH08J003859-8:3862677:G:T2.2803Enhancer71--chr8:3859604-3862780-
ATF7JUNDCREB1ATF2
CSMD1GH08J003877-8:3878760:G:C1.6742Enhancer1--chr8:3877623-3879858-
CREB1
CSMD1GH08J003963-None0.0000Enhancer1--chr8:3963958-3964108-
EZH2
CSMD1GH08J003987-8:3988851:T:C1.1829Enhancer234--chr8:3987299-3989825-
NR2F2ASH2LGABPAZBTB33HDAC1KDM1AMAFKFOXA2JUNDYY1ATF3SP1EHMT2XRCC5MAXHNF4ARXRAFOXK2SKITCF12MNTCTCFHNF4GCREMETV4ELF1NCOR1EP300ZNF24TBX3RESTFOXA1HDAC2RAD21FOXP1NR2F6MAFFHNF1AGATA4USF1FOSL2SOX13TCF7TFAP4HNRNPUL1SMARCE1CREB1ATF7ARID3AETS1TBL1XR1SMC3LCORLBHLHE40CEBPBELF1MAXYY1CREB1CEBPB
CSMD1GH08J004065-8:4067080:C:G0.8383Enhancer56-Distancechr8:4065599-4067136ENSR8_93LKJ
SIN3ATCF12USF1NANOGYY1SP1EP300HDAC2EZH2
CSMD1GH08J004087-8:4087811:A:G0.0121Enhancer17-Distancechr8:4087764-4087920--
CSMD1GH08J004101-8:4103946:T:A0.9639Enhancer183-Distancechr8:4101977-4105279ENSR8_858ZF
HNF4GJUNDCREMEZH2SP1HNF4AYY1CREMRXRAMAXNR2F6RNF2RAD21SKITCF7SP1SOX13JUNDEP300HNF4ASMC3FOXA1FOXA2TFAP4KDM1ABHLHE40CEBPBMAXGABPASP1RXRANR2F2TCF7CREMEP300NR2F6
CSMD1GH08J004106-8:4108093:G:A0.5780Enhancer56-Distancechr8:4106960-4108295ENSR8_85937, ENSR8_5Z4CH
IKZF1CREB1SMC3MXI1EP300SMARCA4USF1CTCFBHLHE40RAD21HNRNPK
CSMD1GH08J004125-8:4126070:T:C0.5779Enhancer1-Distancechr8:4125433-4126434--
CSMD1GH08J004169-None0.0000Enhancer103-Distancechr8:4169108-4169238-
BHLHE40FOXA1HNF4ACREB1FOXA2
CSMD1GH08J004213-8:4213338:G:C0.1967Enhancer6-Distancechr8:4213038-4213392--
CSMD1GH08J004215-8:4215743:T:G0.5618Enhancer1-Distancechr8:4215688-4216941--
CSMD1GH08J004317-8:4317164:T:C0.0255Enhancer14-Distancechr8:4317147-4317471-
EP300
CSMD1GH08J004330-8:4331308:C:T0.9049Enhancer130-Distancechr8:4330738-4332444-
EZH2RESTZBTB33POLR2AATF3FOXA1JUNDRAD21YY1SMARCA4SP1RXRAFOXA2HNF4A
CSMD1GH08J004337-8:4338658:C:T1.0966Enhancer133-Distancechr8:4337776-4339409-
YY1JUNDZBTB33RESTFOXA2ATF3RAD21MAXFOXA1RXRAHNF4ASP1HNF4G
CSMD1GH08J004401-None0.0000Enhancer54-Distancechr8:4401853-4401980-
REST
CSMD1GH08J004405-8:4406251:C:T1.9038Enhancer1-Distancechr8:4405611-4406856ENSR8_93Q7T
FOS
CSMD1GH08J004475-8:4475337:C:G0.1752Enhancer6-Distancechr8:4475126-4475525--
CSMD1GH08J004496-None0.0000Enhancer1-Distancechr8:4496518-4496668-
EP300
CSMD1GH08J004510-None0.0000Enhancer16-eRNA_co-expression,Distancechr8:4510386-4510542-
HNRNPKPCBP2PCBP1FOXA1
CSMD1GH08J004515-8:4515141:T:C0.0288Enhancer1-Distancechr8:4515085-4515148--
CSMD1GH08J004546-None0.0000Enhancer9-eRNA_co-expression,Distancechr8:4546592-4546926--
CSMD1GH08J004896-8:4897316:G:A0.3987Enhancer1-Distancechr8:4896147-4897510-
EZH2
CSMD1GH08J004990-8:4990861:G:A0.0178Enhancer6-eRNA_co-expression,Distancechr8:4990778-4990871-
EZH2
CSMD1GH08J004991-8:4991341:G:T0.5891Enhancer61-eRNA_co-expression,Distancechr8:4991229-4991594-
EZH2SUZ12HDAC2RBBP5KDM4A
CSMD1GH08J004993-8:4993280:G:A0.8304Enhancer72-eRNA_co-expression,Distancechr8:4993199-4993460-
EZH2SUZ12RNF2