GWAS Annotated Elements: DCC

Gene: DCC netrin 1 receptor

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH18J052221 - None 0.0000 Enhancer - C-HiC chr18:52221610-52222007
ATF2
GH18J052340 - None 0.0000 Promoter - Distance chr18:52340147-52340207
CTCFSMC3RAD21RNF2EP300EZH2ASH2LSP1SMARCA4KDM4APHF8TBPSUZ12
GH18J052341 - 18:52342374:T:C 0.9589 Enhancer Elite eRNA_co-expression,Distance chr18:52341962-52342477
EZH2SUZ12RNF2RAD21ASH2LHDAC2CTCFRBBP5SMC3ZNF263TBPBACH1MXI1KDM4ASMARCA4
GH18J052395 - 18:52395777:T:C 1.6674 Enhancer - Distance chr18:52395646-52395798
NFICMLLT1MTA2GATAD2BDPF2MEF2BTBX21EP300ZNF217JUNBIRF4BATF
GH18J052498 - 18:52499139:A:G 0.4537 Enhancer - Distance chr18:52498786-52499801
NR3C1FOXA1EP300BCL3TCF12ATF3ZBTB33RESTSP1JUNDFOSL2NR3C1CEBPBFOXA1
GH18J052517 - 18:52518375:C:T 0.5424 Enhancer - Distance chr18:52517710-52519237
FOXA1
GH18J052570 - 18:52570124:G:A 0.1529 Enhancer - eRNA_co-expression,Distance chr18:52570043-52570237 -
GH18J052682 - 18:52682397:G:A 0.4571 Enhancer - Distance chr18:52682103-52683076
HDAC2REST
GH18J052700 - 18:52701004:G:A 0.3799 Enhancer - Distance chr18:52700671-52702266
RCOR1GATA3
GH18J052723 - 18:52723512:C:A 0.0169 Enhancer - Distance chr18:52723510-52723660
SMARCA4
GH18J052730 - 18:52731861:C:T 0.6359 Enhancer - Distance chr18:52730861-52731889
USF1
GH18J052752 - None 0.0000 Promoter - Distance chr18:52752039-52752099 -
GH18J052792 - 18:52792754:GATTCTATTCCATTCT:G 0.3152 Enhancer - Distance chr18:52792710-52792880 -
GH18J052952 - None 0.0000 Enhancer - Distance chr18:52952997-52953024 -
GH18J053458 - 18:53458627:C:T 2.9335 Enhancer - - chr18:53458560-53459501
ASH2LSMARCA4NR2F2SRF
GH18J053487 - None 0.0000 Enhancer - - chr18:53487534-53487550 -