GWAS Annotated: FARP1

Gene: FERM, ARH/RhoGEF and pleckstrin domain protein 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
FARP1GH13J098004-None0.0000Enhancer71-Distancechr13:98004206-98004376ENSR13_93FW9P
FOXA1MNTFOSSMC3CEBPBBHLHE40NFE2L2
FARP1GH13J098014-None0.0000Enhancer71-Distancechr13:98014846-98015016ENSR13_93FWDR
RAD21FOSJUNDSMC3STAT3CEBPB
FARP1GH13J098021-13:98022594:G:A0.1256Enhancer1-Distancechr13:98021617-98023013ENSR13_93FWGX
EP300JUND
FARP1GH13J098026-13:98026430:T:A0.4871Enhancer229-Distancechr13:98026403-98027095ENSR13_93FWJ6
CHD4YY1HNF4ARXRAPOLR2ASP1MAXXRCC5HDAC1EGR1ATF3GABPARESTZBTB33RAD21ASH2LEP300FOXA2FOXA1KDM1ACEBPBMAFFHNF4GNR3C1JUNDHNF1AATF7CTCFTCF12NR2F2SOX13SIN3ASKIRBM22TBL1XR1NCOR1TCF7NR2F6ATF2USF1BHLHE40TFAP4SMC3FOSL2ELF1ETV4CREM
FARP1GH13J098082-13:98082875:C:T0.3671Enhancer111-Distancechr13:98082786-98084745ENSR13_BPGKC
CTCFBHLHE40JUNDFOSRAD21RCOR1CEBPBSTAT3FOSZNF384CEBPB
FARP1GH13J098089-13:98089307:G:C0.3535Enhancer1-Distancechr13:98089029-98090017ENSR13_93FX7C
FOSSTAT3
FARP1GH13J098104-13:98104661:G:A0.1275Enhancer1-Distancechr13:98104646-98104796-
CTCFKDM4AZNF143
FARP1GH13J098106-13:98106062:C:T0.1955Enhancer185-Distancechr13:98106046-98106156ENSR13_93FXD7
ZNF24GATA4ETV4ZNF384HNF1ACTBP1POLR2GPTBP1EP300MIER1FOSL2CBFA2T2GATA1TFAP4POLR2ASP1NFICMEIS2FOXA1GATA3FOXA2TEAD4GATA2TAL1CBFA2T3ARID1B
FARP1GH13J098117-13:98118906:T:C0.4081Enhancer181-Distancechr13:98117530-98118943-
POLR2ACEBPBSMC3TFAP4NCOR1SMARCA4HDAC2SOX13HNF1AHNF4GCREMNR2F6HNF4AFOXA1SP1TCF12JUNDFOSL2RXRARESTTCF7GATA4ETV4EP300
FARP1GH13J098141-13:98144218:G:T1.4275Promoter/Enhancer548EliteDistancechr13:98141951-98147712ENSR13_93FXQM, ENSR13_BPGTX, ENSR13_6FJM7Z, ENSR13_93FXR3, ENSR13_BPGW4, FARP1_4, FARP1_3, FARP1_1, FARP1_2
SIN3ARUNX3ETV4RXRAU2AF1ASH2LMAXMTA2RBM39YY1DPF2RBFOX2MEF2BPOLR2ATAF15POLR2GELF1EGR1HNRNPKHDAC2RB1NRF1RNF2FUSEBF1HDAC6SUZ12MXI1GATAD2BRAD21ZNF263CTCFSKICBX5TFAP4ETV4L3MBTL2HNRNPLLTRIM22IKZF1TAF1SMC3GABPAE2F6BHLHE40MAXTCF12SIN3AZNF143RXRAEP300BACH1SMARCA5TAF7MNTZBTB7ASTAT3JUNDPHF8MXI1ZFXNANOGTAF1ASH2LRBM39GATAD2BKDM4AAGO2SIN3AELF1HNRNPKCHD1FOSTAF15IKZF1HNRNPLLHDAC1NBNHDAC2SIN3BSAP30SIN3AMXI1L3MBTL2RBFOX2RBM22KDM1AASH2LMAXPOLR2AYY1NCOR1SP1TBPRXRAZBTB33HNF4ACTCFFOXA1FOXA2JUNDCREMRAD21RCOR1EP300XRCC5CEBPBHDAC2SIN3ASMC3EBF1RBFOX2SKICREMASH2LTCF7MNTCBFA2T3EP300NR2F6JUNDRXRAKDM1AFOSL2HDAC2SP1CTCFRAD21TFAP4POLR2GMTA2SKILTBX21CTCFCREMRAD21SKINCOR1SP1EP300TBX3RXRAGATA4TBL1XR1NR2F6FOXA1TCF7ZNF384
FARP1GH13J098155-None0.0000Enhancer130-Distancechr13:98155749-98156040ENSR13_84TWS6
CEBPBRAD21FOSRBM22
FARP1GH13J098161-None0.0000Enhancer223-Distancechr13:98161466-98161656ENSR13_84TWXG
EHMT2CHD4HDAC1TBPFOXA2GABPAHNF1AZMYM3NR2C1ZNF687ZNF24RAD21ZHX2KDM1AMNTNR2F6ATF7GATA4RXRATBX3ETS1BHLHE40FOXK2SP1NR2F2TBL1XR1FOXP1HDAC2TCF7TFAP4EP300FOSL2HNF4GCREMFOXA1CTCFHNF4AJUNDETV4NCOR1CREB1SKIELF1ZBTB7AUSF1TCF12
FARP1GH13J098170-13:98172786:G:A0.5982Enhancer363EliteeRNA_co-expression,Distancechr13:98170891-98176804ENSR13_84TX8C
GATA2MXI1RFX5GATA3POLR2ARCOR1RAD21YY1NR3C1ESR1MAFKMAFFMXI1GATA3RFX5GATA2RAD21RCOR1ESR1NR3C1EP300FOXA1CHD1ASH2LTCF7L2YY1RBM22NCOR1SP1JUNDFOXA1CREB1MNTGABPAPOLR2ACREMFOXA2TBX3MAXEP300ARID3AATF7NR2F2SKIZBTB33ATF3RXRAFOXK2ETS1TBL1XR1FOXP1KDM1AHNF4AFOSL2TCF12HNF4GFOSNR2F6ETV4MAFFSTAT3SIN3ABHLHE40SMC3RCOR1ESR1RAD21NFE2L2ZNF384TCF7MAFKCEBPBRESTCTCFTFAP4HNF4AFOXA1FOXA2KDM1APKNOX1MLLT1SKIELF1FOXA2FOXA1CEBPBPOLR2AAGO2
FARP1GH13J098177-None0.0000Promoter164-Distancechr13:98177235-98177295RNF113B_1
AGO2MGAL3MBTL2MAXGMEB1E2F6MAFK
FARP1GH13J098198-13:98200489:G:A0.2087Enhancer235EliteeQTLs,Distancechr13:98198667-98201539ENSR13_84TXQJ, ENSR13_93FZDG
HNRNPKCREMFOXA2TBX3TCF7POLR2GEP300SKIRXRARBM22HNF4ASP1HDAC2FOXA1RAD21NR2F6ASH2LRBBP5POLR2ATAF1SP1RAD21NANOGTCF12CEBPBFOXA1
FARP1GH13J098201-13:98202612:T:TTATG0.2269Enhancer254EliteDistancechr13:98201813-98202876ENSR13_93FZDZ
IKZF1MEF2BHNRNPLKDM1AGABPAYY1ELF1RESTMAXETV4ZBTB33MTA2NCOR1RBM22SKIEBF1EGR1NR2F2POLR2AHNF4ARAD21EP300JUNDFOXA2FOXA1RXRAHDAC2SP1HNF4GSMARCA4NR2F6ZNF687
FARP1GH13J098203-13:98203802:G:A0.1157Enhancer1-eQTLs,Distancechr13:98203726-98203876ENSR13_93FZFG
CTCF
FARP1GH13J098205-13:98208977:A:G0.3658Enhancer215EliteeQTLs,Distancechr13:98205675-98209513ENSR13_CCQ55
YY1RBM22ESR1GATA3RCOR1RAD21EP300FOSJUNDCEBPB
FARP1GH13J098210-None0.0000Enhancer71-eQTLs,Distancechr13:98210386-98210536ENSR13_84TXZQ
RXRARAD21NR2F2RBM22SRF
FARP1GH13J098213-13:98217653:G:A0.4098Enhancer284EliteeQTLs,Distancechr13:98213068-98218481ENSR13_CCQ5M, ENSR13_BPH9K
POLR2ARESTAGO2SMARCA4RCOR1ZNF316EP300MAFKJUNDMAFFFOSNFE2L2CEBPBMNTMYCUSF2SMARCE1POLR2AEP300FOXA1POLR2AMAFFMAFKFOSRBM22RCOR1RAD21SMC3CTCFJUNDEBF1ZNF263USF1USF2NR2F2IKZF2SRFNFATC3RELBRUNX3EBF1EP300
FARP1GH13J098219-13:98222707:C:T0.8400Enhancer235EliteeQTLs,Distancechr13:98219466-98223961ENSR13_84TZ7K, ENSR13_84TZ84, ENSR13_93FZLQ
POLR2AYY1SPI1EBF1SMARCA4POLR2AHDAC1SMARCA4HDAC2NCOR1SOX6DPF2CEBPBTEAD4ARID1BTCF12MTA2CBFA2T3MEIS2TAL1ZEB2GATA1GATA2PKNOX1CBFA2T2CTBP1POLR2AGATA3
FARP1GH13J098223-13:98224025:G:A0.2182Enhancer71-eQTLs,Distancechr13:98223986-98224136-
POLR2AGATA3
FARP1GH13J098229-None0.0000Enhancer99-Distancechr13:98229006-98229156ENSR13_BPHCD
SP1RXRAHNF4GFOXA2JUNDATF3FOXA1HNF4A
FARP1GH13J098239-13:98240001:T:C0.3942Enhancer36-Distancechr13:98239482-98240213ENSR13_93FZRQ
AGO2TCF12POLR2A
FARP1GH13J098246-13:98247182:C:T0.7939Enhancer193-Distancechr13:98246662-98247230-
HDAC1ASH2LNCOR1CREMFOXK2LCORLFOXA2SP1HNF4AHDAC2RAD21FOXA1HNF4GEP300JUNDKDM1AHNF1AFOSL2ARID3ACREB1TBPSOX13ATF2RXRANR2F6ETV4CEBPBATF7ELF1TFAP4
FARP1GH13J098252-13:98256284:C:T1.3476Enhancer195EliteDistancechr13:98252148-98256651ENSR13_CCQ8G, ENSR13_93FZZ7, ENSR13_BPHH8
CTCFEP300RAD21JUNDFOSCEBPBGATA2FOSL2KDM1ARAD21RXRAHNF4AAGO2CEBPBPOLR2ASMC3NR3C1SMARCA4
FARP1GH13J098260-13:98260807:G:T0.2778Enhancer56-Distancechr13:98260748-98261278ENSR13_93G22X
NR2F2RBM22
FARP1GH13J098265-13:98266207:T:A0.8038Enhancer351EliteDistancechr13:98265604-98268610ENSR13_93G24K, ENSR13_BPHJX
POLR2GSMARCA4ASH2LYY1RESTNCOR1RBFOX2ARID3APOLR2AKDM1ATBX3ZBTB33BRCA1SKITAF1RBM22SP1CREMJUNDATF3MAXRXRANR2F2NR2F6SIN3AGABPAFOXA1XRCC5HNF4AETV4FOXA2GATA4TBPRAD21EGR1HDAC2CHD4HNF4GELF1FOSL2HNF1AEP300RBFOX2ZNF384CREMNCOR1POLR2GMAXMEF2CTAF1ZBTB33BATFRUNX3MEF2BHNF1ANR2F2CTCFATF3YY1TCF7HNF4ARESTHDAC2MNTRBM22ZFXRAD21RFX5FOXA1MEF2ATBPEP300SP1HNF4GPOLR2ANFYBJUNDFOXA2RXRAEGR1ASH2LTFAP4RBM39SMC3NR2F6SKIELF1BHLHE40KDM1AZBTB7ANRF1AGO2RBM22
FARP1GH13J098268-13:98269000:G:A0.1933Enhancer171-Distancechr13:98268945-98269565-
KDM1APOLR2GASH2LCREMARID3ARXRANCOR1SP1SKIHNF4ARBM22HNF4GJUNDHDAC2FOXA2FOXA1EP300
FARP1GH13J098272-13:98275442:G:T0.9079Enhancer334EliteDistancechr13:98272114-98276484ENSR13_84W2CG, ENSR13_BPHKX, ENSR13_93G274, ENSR13_BPHL6
RFX1RBM22C11orf30ZBTB7AFOSZNF316MAFKMAFFGATA4JUNDNR2F6NCOA3HNF1ATFAP4SP1ASH2LESR1FOSL2RXRAFOXA1TCF7GATA3CREMEP300RBFOX2POLR2GKDM1AFOXA2HNF4GNR2F6ELF1RXRAHNF4ARBM22TAF1POLR2ARAD21SMARCA4JUNDFOXA2SP1FOXA1RAD21CEBPBYY1RXRASP1HNF4ANR2F2RAD21PKNOX1RBM22FOXA2EBF1SMARCA4
FARP1GH13J098279-13:98279849:G:A0.5659Enhancer111-Distancechr13:98279446-98280603ENSR13_BPHLQ
BHLHE40MEF2BPBX3FOXK2PKNOX1AGO2ATF7ELF1IKZF1IKZF2YY1PAX5POLR2ANR2F2SPI1SMARCA4
FARP1GH13J098284-13:98285167:T:G0.7058Enhancer164-Distancechr13:98284845-98286452ENSR13_93G2B4
RAD21SMARCA4FOXA1EP300SMARCA4RAD21MXI1RBM22SMARCA4
FARP1GH13J098291-None0.0000Enhancer117-Distancechr13:98291766-98291976-
FOXA1EP300CREMHDAC2FOXA2FOXA2
FARP1GH13J098292-13:98292994:C:CA0.1166Enhancer166-Distancechr13:98292766-98293592ENSR13_84W2QN
NR2F6FOXA1ZNF217JUNDSOX13EP300FOXA2RXRAMNTGATA3CTBP1SREBF1ESR1MYCTFAP4NCOA3USF1
FARP1GH13J098299-13:98302088:A:G1.3249Enhancer263EliteDistancechr13:98299270-98303423ENSR13_BPHPM, ENSR13_CCQCX
EP300RESTCTCFHDAC1ASH2LHNF1AEHMT2JUNDHNF4ARAD21HDAC2NCOR1CEBPBKDM1ATFAP4SIN3ACREMZNF384MNTXRCC5SP1FOXK2MAXRXRAFOSL2EP300RBM22USF1GATA4FOXA1FOXA2HNF4GMAFKFOSMAFFCEBPBARNTRBM22
FARP1GH13J098306-13:98307565:C:T1.4781Enhancer261EliteDistancechr13:98306349-98309021ENSR13_BPHQR
SMARCA4AGO2RAD21EP300MAXNR2F2HDAC2HNF4AZNF384CREMSP1RBM39FOXA1RXRANR2F6TCF7GATA4FOXA2TBX3MNTEP300BHLHE40RBM22USF1CREB1ZMYM3
FARP1GH13J098310-13:98310981:C:G0.6677Enhancer205-Distancechr13:98310386-98311736-
KDM1AYY1CREMRESTHNF4ANR2F6NR2F2HDAC2ETV4JUNDRAD21HNF4GSOX13SP1ELF1RXRAMAXFOXA1CEBPBTFAP4HNF1AEP300CTCFRBM22
FARP1GH13J098313-13:98314063:A:G0.9987Enhancer126-Distancechr13:98313328-98314247-
HNRNPLLHNRNPLCTCFRBM22HNF4ANFICPOLR2ALCORLHNF4ANFIBRBM22RAD21
FARP1GH13J098315-13:98316457:G:A0.6295Enhancer118EliteeQTLs,Distancechr13:98315153-98316660ENSR13_BPHRX
CEBPBCTCFSMARCA4SMC3RAD21POLR2ARBM22
FARP1GH13J098320-None0.0000Enhancer1-Distancechr13:98320686-98320836--
FARP1GH13J098325-13:98325801:G:T0.4356Enhancer118EliteeQTLs,Distancechr13:98325425-98325872-
TRIM28FOXA1
FARP1GH13J098326-13:98329162:A:G0.7475Enhancer257EliteeQTLs,Distancechr13:98326691-98329208ENSR13_BPHTN, ENSR13_84W3J7
CHD7JUNDCREMFOXA2SP1EP300FOXA1TBPRAD21HDAC2NR2F2GATA2USF1MAFK
FARP1GH13J098333-None0.0000Enhancer98EliteDistancechr13:98332546-98332696-
SIN3A
FARP1GH13J098332-None0.0000Enhancer161EliteDistancechr13:98332766-98332956-
SIN3AYY1ZNF316NANOGNFE2L2USF1MAFFNFE2BACH1MAFK
FARP1GH13J098334-13:98333966:A:ACAT0.3492Enhancer173EliteeQTLs,Distancechr13:98332962-98334046-
SIN3AYY1ZNF316NFE2L2USF1MAFFNFE2BACH1XRCC5
FARP1GH13J098349-None0.0000Enhancer56-Distancechr13:98349808-98349888-
CTCFRBM22
FARP1GH13J098350-None0.0000Enhancer91-Distancechr13:98350026-98350216ENSR13_93G2ZR, ENSR13_5T5KTQ
CTCFRBM22RAD21ZBTB33ZNF143SMC3
FARP1GH13J098367-13:98368717:G:A0.5191Enhancer36-Distancechr13:98367839-98368736-
IKZF2IKZF1RELBSP1AGO2CREB1
FARP1GH13J098369-13:98370812:A:C1.2876Enhancer161EliteDistancechr13:98369935-98373976ENSR13_CCQJZ, ENSR13_93G38F
MAFFMAFKUSF1POLR2ARBM22RAD21FOSBHLHE40SMARCA4NANOGRBM22POLR2ARBM22RAD21EP300PRDM10BHLHE40POLR2A
FARP1GH13J098385-13:98385616:T:C0.7626Enhancer1-Distancechr13:98385474-98386043-
RFX1
FARP1GH13J098396-13:98396439:TTGAGTGAGGAACAGGAGGAGGA:T0.3211Enhancer56-Distancechr13:98396020-98396555-
RBM22AGO2JUND
FARP1GH13J098401-13:98402544:G:A0.2208Enhancer63EliteDistancechr13:98401760-98402584-
RBM22POLR2A
FARP1GH13J098406-13:98406590:T:TA0.6621Enhancer36-Distancechr13:98406472-98407292-
CTCFRAD21POLR2A
FARP1GH13J098411-13:98411990:T:C0.4002Enhancer160EliteDistancechr13:98411288-98412554-
MAFFMAFKEP300POLR2A
FARP1GH13J098412-13:98412910:G:A0.1501Enhancer1-Distancechr13:98412815-98413259-
RBM22
FARP1GH13J098414-13:98416985:G:T0.5830Enhancer210EliteDistancechr13:98414468-98417817ENSR13_BPJCH
ZNF24CTCFPOLR2AZBTB40ZBTB11GATA3ATF7FOXA1FOSESR1MBD2NFIBJUNDSIN3AZNF217RCOR1DPF2ZNF579MNTZNF24EP300CTBP1ZFXHES1PKNOX1SMARCE1MYCZNF687FOSL2
FARP1GH13J098418-13:98418758:C:T0.0689Enhancer63EliteDistancechr13:98418627-98418945--
FARP1GH13J098419-13:98420504:T:G0.3637Enhancer153EliteDistancechr13:98419378-98420625-
FOXA1EP300GATA3NCOA3ESRRAESR1CREB1
FARP1GH13J098420-13:98420808:A:C0.2018Enhancer63EliteDistancechr13:98420666-98420816--
FARP1GH13J098427-13:98427904:G:T0.9492Enhancer36-Distancechr13:98427858-98428482-
SMC3
FARP1GH13J098429-13:98430348:G:A0.1983Enhancer71-Distancechr13:98429969-98430773-
BACH1MAFKRBM22CTCF
FARP1GH13J098431-None0.0000Enhancer218EliteDistancechr13:98431146-98431316ENSR13_5T64RH
CTCFPOLR2AZNF217SMC3AGO2FOXA1HNRNPLTRIM22GATA3MYCSMARCA5RBM22RAD21USF1
FARP1GH13J098442-13:98444368:A:G0.9306Enhancer324EliteDistancechr13:98442784-98446611ENSR13_BPJHF, ENSR13_CCQQC, ENSR13_5T677S, ENSR13_5T6789, ENSR13_5T67CR
RBM22AGO2E2F6AGO2CHD1FOSBHLHE40AGO1POLR2GNFE2L2POLR2ASTAT3CEBPBMAFKUSF2RBM39POLR2ACTCFIKZF1NRF1AGO1SMC3RAD21MXI1DPF2CTBP1SIN3AAGO2RXRATRIM22E4F1MLLT1XRCC5ZNF444NBNMYCRB1RCOR1CC2D1AZNF207YY1GABPB1SMARCA4RUNX3ELF4ELF1IRF4ZNF143ETS1POU2F2TBL1XR1RESTSPI1FOSL2SRFBCL3GABPAMYNNHNRNPH1BHLHE40RBM39AGO2AGO1JUND
FARP1GH13J098448-None0.0000Enhancer144EliteDistancechr13:98448426-98448616-
RBM22POLR2GPOLR2ARBM39CTCFAGO2SMC3RAD21ZBTB33YY1JUNDZNF143BCL3BATF
FARP1GH13J098449-13:98450195:C:T0.1299Enhancer1-Distancechr13:98449659-98450217ENSR13_84W65H
RBM22POLR2AEP300
FARP1GH13J098450-13:98450553:A:G0.7678Enhancer235EliteDistancechr13:98450248-98452497ENSR13_84W65H, ENSR13_BPJJG, ENSR13_BPJJL
RBM22EP300POLR2AAGO1AGO2JUNDPOLR2GFOSL2NFATC1ETS1SP1FOXA1ATF2POLR2APOLR2GSIN3APKNOX1FOSL2JUNDEP300AGO2
FARP1GH13J098454-13:98453496:C:T0.0777Enhancer63EliteDistancechr13:98453467-98453497ENSR13_93G44N
POLR2AAGO2RBM22POLR2GEP300FOSL2
FARP1GH13J098453-13:98455072:C:T0.4596Enhancer277EliteDistancechr13:98453906-98455792ENSR13_BPJK2
AGO2RXRAHNF4AJUNDSP1YY1ZNF263EP300ATF3RAD21POLR2ACEBPBBHLHE40POLR2GRBM22RBM22