GWAS Annotated: FHIT

Gene: fragile histidine triad diadenosine triphosphatase

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
FHITGH03J059748-3:59748961:A:G0.5527Enhancer36--chr3:59748632-59750185ENSR3_9TPBL
SPI1MAFKNFE2L2
FHITGH03J059759-3:59759804:T:G0.6700Enhancer36--chr3:59759457-59760044ENSR3_9TPFL
HNF4AHNF4G
FHITGH03J059764-3:59764241:C:T0.2670Enhancer1--chr3:59764214-59764364ENSR3_9TPGX
GATA2
FHITGH03J059765-3:59766362:T:C0.3910Enhancer1--chr3:59765904-59767501ENSR3_BFT8Q
BHLHE40EP300FOSCEBPB
FHITGH03J059771-3:59772102:G:T0.8958Enhancer183Elite-chr3:59771389-59772718ENSR3_BFT9K, ENSR3_BFT9N
MAFKMAFFC11orf30HSF1ZNF316FOSL2CREB1BHLHE40FOSCEBPBFOXA1CTCF
FHITGH03J059772-3:59772948:A:G0.7833Enhancer118Elite-chr3:59772800-59773883ENSR3_BFT9N
CTCFRUNX3GATA2MXI1
FHITGH03J059774-3:59774825:C:G1.1022Enhancer36--chr3:59774075-59775528ENSR3_BFT9Z
MXI1GATA3RCOR1GATA2MAFKFOSBHLHE40
FHITGH03J059795-3:59796050:C:A0.2711Enhancer1--chr3:59795914-59796064--
FHITGH03J059796-3:59796242:C:T0.6421Enhancer1--chr3:59796114-59796264--
FHITGH03J059800-None0.0000Enhancer56--chr3:59800599-59801187-
ZEB1SMARCA4PKNOX1
FHITGH03J059808-3:59809251:C:T0.7828Enhancer227Elite-chr3:59808279-59810384ENSR3_9TPXT, ENSR3_83QGWW, ENSR3_BFTH4
ATF3ATF2SRFMAFKCTCFSMC3RAD21YY1
FHITGH03J059817-3:59817780:T:C1.8466Enhancer266Elite-chr3:59817315-59819461ENSR3_9TQ3D, ENSR3_BFTJB
SMARCA4JUNDZNF384TCF7RXRAPOLR2AFOSUSF1USF2NRF1ARID1BTAF1JUNDSTAT3L3MBTL2GABPB1FOSYY1EP300TBPMAXBHLHE40CEBPBNR3C1MITFNFICUSF1USF2FOSL2
FHITGH03J059836-3:59836948:C:T1.6453Enhancer56--chr3:59836279-59837149ENSR3_9TQ8T
SMARCA4MXI1MNT
FHITGH03J059839-None0.0000Enhancer111--chr3:59839399-59839801ENSR3_BFTMD
FOSCEBPBRELBDPF2SKILATF7GATAD2BARNTZNF592MLLT1CREMEBF1NFICJUNBBMI1MEF2B
FHITGH03J059858-3:59857709:T:TTTTTTG0.3503Enhancer133--chr3:59857594-59857744ENSR3_BFTPZ
CTCFYY1CREME2F1ATF3ATF7JUNDCREB1ATF2MAXRFX5ZNF384RAD21TRIM22RESTSMC3
FHITGH03J059857-None0.0000Enhancer154--chr3:59857774-59857984ENSR3_BFTPZ, ENSR3_5J45P4
CTCFYY1CREME2F1ATF3ATF7JUNDCREB1ATF2MAXRFX5ZNF384RAD21TRIM22RESTSMC3RUNX3RCOR1MEF2ASMARCA4ZNF143SPI1
FHITGH03J059866-3:59866194:T:G1.0521Enhancer9--chr3:59866133-59866258-
STAT3EP300SPI1
FHITGH03J059873-3:59873871:G:A0.3454Enhancer99--chr3:59873800-59874000-
DPF2MTA2TBX21IKZF1IKZF2BCL11AMEF2BEBF1BATFEP300
FHITGH03J059876-3:59876911:G:A0.4877Enhancer11--chr3:59876698-59876915-
SPI1
FHITGH03J059940-3:59941100:C:T0.0691Enhancer1--chr3:59940600-59941200-
SPI1
FHITGH03J059953-3:59954092:G:A0.4999Enhancer9--chr3:59953862-59954241--
FHITGH03J059986-3:59986129:A:G0.9804Enhancer99--chr3:59986000-59986400-
MLLT1IKZF1IKZF2NFICETV6EEDSPI1RUNX3
FHITGH03J060007-3:60010957:C:G1.8428Enhancer153Elite-chr3:60007793-60012128ENSR3_BFWK5
RELBMTA2SPI1BHLHE40SRFRUNX3ETV6GABPA
FHITGH03J060017-3:60017864:T:G0.3043Enhancer71--chr3:60017033-60018578ENSR3_BFWL5
MTA2ATF2IKZF1FOSBHLHE40EEDRUNX3POU2F2PKNOX1
FHITGH03J060027-3:60027983:T:C0.1881Enhancer13--chr3:60027631-60028030-
ATF4
FHITGH03J060047-3:60048542:C:T1.0870Enhancer145Elite-chr3:60047495-60049541--
FHITGH03J060055-3:60056365:A:G1.0294Enhancer63Elite-chr3:60055109-60057348ENSR3_9TSLB, ENSR3_9TSLH
PKNOX1GATA2KDM1ARBM25
FHITGH03J060059-3:60063454:T:C1.2844Enhancer36--chr3:60059199-60063928-
MNT
FHITGH03J060064-3:60064907:T:C0.3463Enhancer180Elite-chr3:60064466-60066073ENSR3_9TSNW
MTA2TBX21TRIM22IKZF1CBFA2T3TCF12JUNDFOS
FHITGH03J060066-3:60067715:T:C0.8302Enhancer36--chr3:60066793-60068072-
ZNF24
FHITGH03J060069-3:60069240:T:C0.8047Enhancer1--chr3:60069181-60072468-
FOXA2
FHITGH03J060074-3:60075174:G:A0.6908Enhancer1--chr3:60074220-60075758--
FHITGH03J060076-3:60076299:G:A0.1424Enhancer63Elite-chr3:60076000-60076400ENSR3_9TSS8-
FHITGH03J060077-None0.0000Enhancer71Elite-chr3:60076499-60076531ENSR3_9TSS8-
FHITGH03J060078-3:60079734:T:A0.9728Enhancer226Elite-chr3:60078749-60079800ENSR3_83QNP3
YY1CTCFPOLR2ARAD21RELBSMARCA4TBX21TCF7SMARCA4
FHITGH03J060080-3:60080094:G:A0.7813Enhancer307Elite-chr3:60080014-60082658ENSR3_9TSTH, ENSR3_75JDHP, ENSR3_BFWXD
BATFPOLR2AIKZF2NFICCBFBTCF12ETV6IKZF1ATF2NFATC3EP300ELF1ATF7SPI1ZNF384RUNX3TBX21YY1
FHITGH03J060084-3:60084593:T:G1.4718Enhancer154--chr3:60084557-60088799ENSR3_BFWZ5
ATF2HNF4ASKILATF3SMARCE1FOSDPF2RUNX3JUNMTA1CREB1ZNF143JUNDCREMARID1BNFE2FOSL2ATF7SMARCA4JUNBFOSL1MYCATF2BATFE2F1MITFSMARCA4MNTHMBOX1
FHITGH03J060090-3:60090272:A:G0.4839Enhancer1--chr3:60090227-60091556--
FHITGH03J060100-3:60104257:C:T1.0600Enhancer56--chr3:60100776-60104302-
FOXA1POLR2ACEBPBIKZF1PKNOX1MEIS2ARNTZNF384
FHITGH03J060126-3:60127102:C:T0.4250Enhancer6--chr3:60126938-60127295--
FHITGH03J060146-3:60146435:T:C1.0696Enhancer6--chr3:60146246-60146450--
FHITGH03J060198-3:60198538:G:GA2.7302Enhancer98--chr3:60198257-60198552-
GATA3
FHITGH03J060240-None0.0000Enhancer130--chr3:60240672-60240782ENSR3_83QS6K
MAXRXRASP1RAD21JUNDHNF4AHNF4GFOXA2ETS1ELF1FOXA1NANOGTCF12EP300TFAP4
FHITGH03J060289-None0.0000Enhancer98-Distancechr3:60289428-60289670--
FHITGH03J060294-3:60294681:G:C0.5759Enhancer82-Distancechr3:60294054-60294713ENSR3_9TX69
MAFFMAFKC11orf30ZNF316CEBPBFOSJUNDBHLHE40STAT3
FHITGH03J060300-3:60300757:T:C1.2489Enhancer91-Distancechr3:60300673-60301812ENSR3_9TX8B
SMARCA4ARID1BSTAT3FOSCEBPBRCOR1C11orf30NFE2L2MAFKBHLHE40JUNDCUX1ATF3HMBOX1
FHITGH03J060303-3:60303411:A:G1.1846Enhancer126-Distancechr3:60303362-60304395ENSR3_83QTHR, ENSR3_9TX96
RXRARAD21SP1HNF4AHNF4GCEBPBTAL1USF1ATF7ZNF592ARID1BHNF4ARXRATRIM24NR2F1SP1EP300ATF4ATF3CEBPBJUNDIKZF1
FHITGH03J060315-3:60315555:G:A0.1754Enhancer11-Distancechr3:60315510-60315820--
FHITGH03J060316-None0.0000Enhancer98-Distancechr3:60316113-60316363-
EP300
FHITGH03J060322-None0.0000Enhancer98-Distancechr3:60322663-60322976-
RXRAYY1SP1RAD21FOXA1HNF4GHNF4AFOXA2CTCF
FHITGH03J060406-None0.0000Enhancer14-Distancechr3:60406860-60407096--
FHITGH03J060555-3:60555327:G:A0.7963Enhancer166-Distancechr3:60555195-60556648ENSR3_BG2GZ
WRNIP1EP300RAD21STAT3MAXRELBNFATC1NFICGATAD2BMLLT1EEDARNTUSF2IKZF1DPF2BHLHE40MEF2BATF3ATF7ATF2NFATC3USF1TCF12ZNF217TBX21RAD51ETV6POU2F2TBL1XR1MTA2BCL11AJUNDPAX5ELF1FOSRUNX3MEF2ABACH1JUNBSPI1BATFNANOGIKZF2IRF4ZBTB40
FHITGH03J060579-None0.0000Enhancer117-Distancechr3:60579867-60580017ENSR3_9W37W
JUNDYY1FOSGATA3MAFKBHLHE40RAD21CEBPBSTAT3
FHITGH03J060588-3:60589335:A:G1.8022Enhancer91-Distancechr3:60588448-60589463ENSR3_9W3BK
CREB1ATF3STAT3FOSJUNJUNDMYCBHLHE40FOSL2CEBPBMNT
FHITGH03J060669-3:60669469:G:A0.2195Enhancer161EliteDistancechr3:60669117-60670714ENSR3_83R6CS
HDAC2POLR2ACHD7ETS1SP1EP300RESTJUNDNANOGRAD21YY1TCF12BCL11A
FHITGH03J060671-3:60672304:T:C0.4546Enhancer1-Distancechr3:60671986-60672305--
FHITGH03J060673-None0.0000Enhancer1-Distancechr3:60672467-60672617--
FHITGH03J060672-3:60673269:G:A0.6259Enhancer99-Distancechr3:60672655-60673475--
FHITGH03J060710-3:60710074:TA:T1.0634Enhancer9-Distancechr3:60710031-60710088--
FHITGH03J060742-None0.0000Enhancer237EliteDistancechr3:60742592-60743201ENSR3_BG3H2, ENSR3_5J9QGR
JUNDZNF263TRIM28FOSNR3C1ESR1PKNOX1SRFCTCFCTBP1ARNTRAD21YY1ZNF143SMC3SMARCA4
FHITGH03J060743-3:60743499:G:A1.0387Enhancer126-Distancechr3:60743374-60744168ENSR3_BG3H6
TRIM28CTCFFOXA1EZH2CTCFNR2F6SMARCA4SPI1SMC3RXRAEP300RAD21RFX5FOXA1ZBTB7AFOXA2NFIB
FHITGH03J060756-3:60756738:T:C0.8508Enhancer1-Distancechr3:60756568-60756946ENSR3_83R887-
FHITGH03J060770-3:60770855:T:C1.3154Enhancer117-Distancechr3:60770707-60770857ENSR3_83R8J9
ZNF687RCOR1FOXA1NEUROD1ZNF217NR3C1ESR1CTBP1DPF2SMARCE1
FHITGH03J060772-3:60772652:A:C1.3295Enhancer56-Distancechr3:60772550-60772757-
SP1YY1NANOG
FHITGH03J060791-3:60791914:G:T0.6336Enhancer6-Distancechr3:60791561-60791936--
FHITGH03J060854-3:60854430:G:C0.0955Enhancer1-Distancechr3:60854400-60854800-
ZNF384
FHITGH03J060886-3:60886650:C:T0.9581Enhancer1-Distancechr3:60886608-60886758-
SP1
FHITGH03J060913-None0.0000Enhancer1-Distancechr3:60913068-60913218-
FOS
FHITGH03J060953-3:60954091:T:C1.0750Enhancer158-Distancechr3:60953498-60954764ENSR3_83RDG3, ENSR3_BG4LL
STAT3FOSUSF1JUNDATF3ATF7FOSHNF4ARXRASTAT3PKNOX1ATF2
FHITGH03J060979-None0.0000Enhancer36-Distancechr3:60979800-60980001ENSR3_9W7HP-
FHITGH03J061008-3:61008911:G:C1.4775Enhancer144EliteC-HiC,Distancechr3:61008600-61009535ENSR3_9W7S5
EP300CEBPBPOLR2AELF1MITFRAD51EP300USF2SPI1USF1
FHITGH03J061030-3:61030667:C:T1.3377Enhancer162-Distancechr3:61030568-61030718ENSR3_9W83B
CREMMNTASH2LCTCFFOSARID3AEP300JUNDEHMT2ATF7KDM1ALCORLTCF7FOXA2FOXA1RXRAHDAC2FOSL2
FHITGH03J061140-3:61141139:G:T0.6794Enhancer56-eQTLs,Distancechr3:61140612-61142591ENSR3_BG5LP
NANOGJUNDHDAC2NANOGESR1
FHITGH03J061182-None0.0000Enhancer218-Distancechr3:61182027-61182117ENSR3_9W9N5
YY1IKZF2NFICIKZF1MTA2DPF2RELBATF2CBX5SKILHNF4AEP300JUNDRAD51EBF1ATF3ETV6ESR1FOSL2MEF2ACREB1TBL1XR1STAT3PKNOX1CREMFOSBHLHE40TCF12BACH1IRF4MYCJUNBPAX5TBX21ATF7BCL11AJUNSMC3BATFRUNX3GABPAPBX3
FHITGH03J061196-3:61196112:G:C0.1905Promoter129-Distancechr3:61196073-61196133FHIT_2
CEBPB
FHITGH03J061249-3:61252842:T:C0.5702Promoter/Enhancer574EliteeQTLs,Distancechr3:61249586-61253847ENSR3_C844Q, ENSR3_5JDZFM, ENSR3_83RLSG, ENSR3_BG67N, ENSR3_83RLTJ, FHIT_1
ASH2LEP400MLLT1RBM39GMEB1AFF1ZNF143CTCFHDAC1ATF7ASH1LRAD51KDM5AL3MBTL2ZNF217HCFC1FOXA2MEF2BNR2C1SIN3AYY1ZHX2FOXK2NRF1PKNOX1NBNCTBP1RBFOX2ESRRAE2F1ZFXIKZF1TBL1XR1DEAF1MNTRAD21RXRACREB1ZBTB33HNRNPLBMI1TAF15ZEB2TBX21MXI1MYCETS1TCF12ELF4CREB3L1CREMZNF263SUZ12KLF5RFX1MAXRCOR1GABPAXRCC5TRIM28SIX5CBFBSP1ZBTB11RNF2E4F1ARNTGABPB1TBPZEB1BHLHE40EBF1ESR1TAF1ZNF207RESTPOLR2APOLR2GATF3WRNIP1IRF4ELF1USF1ELK1HNF4AEP300USF2TFAP4E2F6PAX5MAFKSMC3HSF1SRFMBD2POU2F2ZNF687FOSL2RUNX3PHF8IKZF2IKZF1ZNF592MNTSIN3ARAD51MGACHD4BHLHE40MAXMXI1MYCE2F6EP400EBF1USF2USF1PHF8RESTRBFOX2TBL1XR1TBPASH2LHDAC2AGO1KDM4AEP300PCBP1HNF1APOLR2GBCORSAFBTAF15CTCFRBM39GATAD2BTAF1NR2F6FOXA2ZNF217NR2F1HNRNPLTFAP4PKNOX1U2AF2AGO2ZBTB33RESTZNF143FOXA1HNF4AMAXBACH1RAD21GABPAXRCC5YY1NR2F2HNF4GETV4MITFETS1CREB3L1ATF3E4F1ELF4HCFC1MYCDEAF1ZBTB40SP1E2F1NR2C1ZEB2HNRNPLLNRF1ZHX2ESRRAEBF1SUZ12SMAD5NBNIRF1RXRACREB1DPF2CREMMBD2E2F7ATF7IKZF2TCF12USF1MAFFELF1RB1RFX1GABPB1NANOGSIX5BHLHE40AFF1NEUROD1ARNTPBX3RUNX3POU2F2IRF3SIN3BUSF2FOSIRF4STAT1E2F4JUNDTRIM22RBM25ASH1LTBX21SRFNFYAL3MBTL2E2F8NFYBE2F6MLLT1CHD1CBFBRELBNFRKBCTCFCREB1FOSGATA2ESRRACTCFTBX21BHLHE40
FHITGH03J062168-3:62171023:C:T0.8201Enhancer111-eQTLschr3:62168819-62171226ENSR3_9WN92
GATA3SMARCE1JUNDZFXZBTB40ATF7IKZF1SPI1FOSMEF2BEBF1GATA2EP300ZFX