GWAS Annotated Elements: FHIT

Gene: fragile histidine triad diadenosine triphosphatase

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH03J059748 - 3:59748961:A:G 0.5527 Enhancer - - chr3:59748632-59750185
SPI1MAFKNFE2L2
GH03J059759 - 3:59759804:T:G 0.6700 Enhancer - - chr3:59759457-59760044
HNF4AHNF4G
GH03J059764 - 3:59764241:C:T 0.2670 Enhancer - - chr3:59764214-59764364
GATA2
GH03J059765 - 3:59766362:T:C 0.3910 Enhancer - - chr3:59765904-59767501
BHLHE40EP300FOSCEBPB
GH03J059771 - 3:59772102:G:T 0.8958 Enhancer Elite - chr3:59771389-59772718
MAFKMAFFC11orf30HSF1ZNF316FOSL2CREB1BHLHE40FOSCEBPBFOXA1CTCF
GH03J059772 - 3:59772948:A:G 0.7833 Enhancer Elite - chr3:59772800-59773883
CTCFRUNX3GATA2MXI1
GH03J059774 - 3:59774825:C:G 1.1022 Enhancer - - chr3:59774075-59775528
MXI1GATA3RCOR1GATA2MAFKFOSBHLHE40
GH03J059795 - 3:59796050:C:A 0.2711 Enhancer - - chr3:59795914-59796064 -
GH03J059796 - 3:59796242:C:T 0.6421 Enhancer - - chr3:59796114-59796264 -
GH03J059800 - None 0.0000 Enhancer - - chr3:59800599-59801187
ZEB1SMARCA4PKNOX1
GH03J059808 - 3:59809251:C:T 0.7828 Enhancer Elite - chr3:59808279-59810384
ATF3ATF2SRFMAFKCTCFSMC3RAD21YY1
GH03J059817 - 3:59817780:T:C 1.8466 Enhancer Elite - chr3:59817315-59819461
SMARCA4JUNDZNF384TCF7RXRAPOLR2AFOSUSF1USF2NRF1ARID1BTAF1JUNDSTAT3L3MBTL2GABPB1FOSYY1EP300TBPMAXBHLHE40CEBPBNR3C1MITFNFICUSF1USF2FOSL2
GH03J059836 - 3:59836948:C:T 1.6453 Enhancer - - chr3:59836279-59837149
SMARCA4MXI1MNT
GH03J059839 - None 0.0000 Enhancer - - chr3:59839399-59839801
FOSCEBPBRELBDPF2SKILATF7GATAD2BARNTZNF592MLLT1CREMEBF1NFICJUNBBMI1MEF2B
GH03J059858 - 3:59857709:T:TTTTTTG 0.3503 Enhancer - - chr3:59857594-59857744
CTCFYY1CREME2F1ATF3ATF7JUNDCREB1ATF2MAXRFX5ZNF384RAD21TRIM22RESTSMC3
GH03J059857 - None 0.0000 Enhancer - - chr3:59857774-59857984
CTCFYY1CREME2F1ATF3ATF7JUNDCREB1ATF2MAXRFX5ZNF384RAD21TRIM22RESTSMC3RUNX3RCOR1MEF2ASMARCA4ZNF143SPI1
GH03J059866 - 3:59866194:T:G 1.0521 Enhancer - - chr3:59866133-59866258
STAT3EP300SPI1
GH03J059873 - 3:59873871:G:A 0.3454 Enhancer - - chr3:59873800-59874000
DPF2MTA2TBX21IKZF1IKZF2BCL11AMEF2BEBF1BATFEP300
GH03J059876 - 3:59876911:G:A 0.4877 Enhancer - - chr3:59876698-59876915
SPI1
GH03J059940 - 3:59941100:C:T 0.0691 Enhancer - - chr3:59940600-59941200
SPI1
GH03J059953 - 3:59954092:G:A 0.4999 Enhancer - - chr3:59953862-59954241 -
GH03J059986 - 3:59986129:A:G 0.9804 Enhancer - - chr3:59986000-59986400
MLLT1IKZF1IKZF2NFICETV6EEDSPI1RUNX3
GH03J060007 - 3:60010957:C:G 1.8428 Enhancer Elite - chr3:60007793-60012128
RELBMTA2SPI1BHLHE40SRFRUNX3ETV6GABPA
GH03J060017 - 3:60017864:T:G 0.3043 Enhancer - - chr3:60017033-60018578
MTA2ATF2IKZF1FOSBHLHE40EEDRUNX3POU2F2PKNOX1
GH03J060027 - 3:60027983:T:C 0.1881 Enhancer - - chr3:60027631-60028030
ATF4
GH03J060047 - 3:60048542:C:T 1.0870 Enhancer Elite - chr3:60047495-60049541 -
GH03J060055 - 3:60056365:A:G 1.0294 Enhancer Elite - chr3:60055109-60057348
PKNOX1GATA2KDM1ARBM25
GH03J060059 - 3:60063454:T:C 1.2844 Enhancer - - chr3:60059199-60063928
MNT
GH03J060064 - 3:60064907:T:C 0.3463 Enhancer Elite - chr3:60064466-60066073
MTA2TBX21TRIM22IKZF1CBFA2T3TCF12JUNDFOS
GH03J060066 - 3:60067715:T:C 0.8302 Enhancer - - chr3:60066793-60068072
ZNF24
GH03J060069 - 3:60069240:T:C 0.8047 Enhancer - - chr3:60069181-60072468
FOXA2
GH03J060074 - 3:60075174:G:A 0.6908 Enhancer - - chr3:60074220-60075758 -
GH03J060076 - 3:60076299:G:A 0.1424 Enhancer Elite - chr3:60076000-60076400 -
GH03J060077 - None 0.0000 Enhancer Elite - chr3:60076499-60076531 -
GH03J060078 - 3:60079734:T:A 0.9728 Enhancer Elite - chr3:60078749-60079800
YY1CTCFPOLR2ARAD21RELBSMARCA4TBX21TCF7SMARCA4
GH03J060080 - 3:60080094:G:A 0.7813 Enhancer Elite - chr3:60080014-60082658
BATFPOLR2AIKZF2NFICCBFBTCF12ETV6IKZF1ATF2NFATC3EP300ELF1ATF7SPI1ZNF384RUNX3TBX21YY1
GH03J060084 - 3:60084593:T:G 1.4718 Enhancer - - chr3:60084557-60088799
ATF2HNF4ASKILATF3SMARCE1FOSDPF2RUNX3JUNMTA1CREB1ZNF143JUNDCREMARID1BNFE2FOSL2ATF7SMARCA4JUNBFOSL1MYCATF2BATFE2F1MITFSMARCA4MNTHMBOX1
GH03J060090 - 3:60090272:A:G 0.4839 Enhancer - - chr3:60090227-60091556 -
GH03J060100 - 3:60104257:C:T 1.0600 Enhancer - - chr3:60100776-60104302
FOXA1POLR2ACEBPBIKZF1PKNOX1MEIS2ARNTZNF384
GH03J060126 - 3:60127102:C:T 0.4250 Enhancer - - chr3:60126938-60127295 -
GH03J060146 - 3:60146435:T:C 1.0696 Enhancer - - chr3:60146246-60146450 -
GH03J060198 - 3:60198538:G:GA 2.7302 Enhancer - - chr3:60198257-60198552
GATA3
GH03J060240 - None 0.0000 Enhancer - - chr3:60240672-60240782
MAXRXRASP1RAD21JUNDHNF4AHNF4GFOXA2ETS1ELF1FOXA1NANOGTCF12EP300TFAP4
GH03J060289 - None 0.0000 Enhancer - Distance chr3:60289428-60289670 -
GH03J060294 - 3:60294681:G:C 0.5759 Enhancer - Distance chr3:60294054-60294713
MAFFMAFKC11orf30ZNF316CEBPBFOSJUNDBHLHE40STAT3
GH03J060300 - 3:60300757:T:C 1.2489 Enhancer - Distance chr3:60300673-60301812
SMARCA4ARID1BSTAT3FOSCEBPBRCOR1C11orf30NFE2L2MAFKBHLHE40JUNDCUX1ATF3HMBOX1
GH03J060303 - 3:60303411:A:G 1.1846 Enhancer - Distance chr3:60303362-60304395
RXRARAD21SP1HNF4AHNF4GCEBPBTAL1USF1ATF7ZNF592ARID1BHNF4ARXRATRIM24NR2F1SP1EP300ATF4ATF3CEBPBJUNDIKZF1
GH03J060315 - 3:60315555:G:A 0.1754 Enhancer - Distance chr3:60315510-60315820 -
GH03J060316 - None 0.0000 Enhancer - Distance chr3:60316113-60316363
EP300
GH03J060322 - None 0.0000 Enhancer - Distance chr3:60322663-60322976
RXRAYY1SP1RAD21FOXA1HNF4GHNF4AFOXA2CTCF
GH03J060406 - None 0.0000 Enhancer - Distance chr3:60406860-60407096 -
GH03J060555 - 3:60555327:G:A 0.7963 Enhancer - Distance chr3:60555195-60556648
WRNIP1EP300RAD21STAT3MAXRELBNFATC1NFICGATAD2BMLLT1EEDARNTUSF2IKZF1DPF2BHLHE40MEF2BATF3ATF7ATF2NFATC3USF1TCF12ZNF217TBX21RAD51ETV6POU2F2TBL1XR1MTA2BCL11AJUNDPAX5ELF1FOSRUNX3MEF2ABACH1JUNBSPI1BATFNANOGIKZF2IRF4ZBTB40
GH03J060579 - None 0.0000 Enhancer - Distance chr3:60579867-60580017
JUNDYY1FOSGATA3MAFKBHLHE40RAD21CEBPBSTAT3
GH03J060588 - 3:60589335:A:G 1.8022 Enhancer - Distance chr3:60588448-60589463
CREB1ATF3STAT3FOSJUNJUNDMYCBHLHE40FOSL2CEBPBMNT
GH03J060669 - 3:60669469:G:A 0.2195 Enhancer Elite Distance chr3:60669117-60670714
HDAC2POLR2ACHD7ETS1SP1EP300RESTJUNDNANOGRAD21YY1TCF12BCL11A
GH03J060671 - 3:60672304:T:C 0.4546 Enhancer - Distance chr3:60671986-60672305 -
GH03J060673 - None 0.0000 Enhancer - Distance chr3:60672467-60672617 -
GH03J060672 - 3:60673269:G:A 0.6259 Enhancer - Distance chr3:60672655-60673475 -
GH03J060710 - 3:60710074:TA:T 1.0634 Enhancer - Distance chr3:60710031-60710088 -
GH03J060742 - None 0.0000 Enhancer Elite Distance chr3:60742592-60743201
JUNDZNF263TRIM28FOSNR3C1ESR1PKNOX1SRFCTCFCTBP1ARNTRAD21YY1ZNF143SMC3SMARCA4
GH03J060743 - 3:60743499:G:A 1.0387 Enhancer - Distance chr3:60743374-60744168
TRIM28CTCFFOXA1EZH2CTCFNR2F6SMARCA4SPI1SMC3RXRAEP300RAD21RFX5FOXA1ZBTB7AFOXA2NFIB
GH03J060756 - 3:60756738:T:C 0.8508 Enhancer - Distance chr3:60756568-60756946 -
GH03J060770 - 3:60770855:T:C 1.3154 Enhancer - Distance chr3:60770707-60770857
ZNF687RCOR1FOXA1NEUROD1ZNF217NR3C1ESR1CTBP1DPF2SMARCE1
GH03J060772 - 3:60772652:A:C 1.3295 Enhancer - Distance chr3:60772550-60772757
SP1YY1NANOG
GH03J060791 - 3:60791914:G:T 0.6336 Enhancer - Distance chr3:60791561-60791936 -
GH03J060854 - 3:60854430:G:C 0.0955 Enhancer - Distance chr3:60854400-60854800
ZNF384
GH03J060886 - 3:60886650:C:T 0.9581 Enhancer - Distance chr3:60886608-60886758
SP1
GH03J060913 - None 0.0000 Enhancer - Distance chr3:60913068-60913218
FOS
GH03J060953 - 3:60954091:T:C 1.0750 Enhancer - Distance chr3:60953498-60954764
STAT3FOSUSF1JUNDATF3ATF7FOSHNF4ARXRASTAT3PKNOX1ATF2
GH03J060979 - None 0.0000 Enhancer - Distance chr3:60979800-60980001 -
GH03J061008 - 3:61008911:G:C 1.4775 Enhancer Elite C-HiC,Distance chr3:61008600-61009535
EP300CEBPBPOLR2AELF1MITFRAD51EP300USF2SPI1USF1
GH03J061030 - 3:61030667:C:T 1.3377 Enhancer - Distance chr3:61030568-61030718
CREMMNTASH2LCTCFFOSARID3AEP300JUNDEHMT2ATF7KDM1ALCORLTCF7FOXA2FOXA1RXRAHDAC2FOSL2
GH03J061140 - 3:61141139:G:T 0.6794 Enhancer - eQTLs,Distance chr3:61140612-61142591
NANOGJUNDHDAC2NANOGESR1
GH03J061182 - None 0.0000 Enhancer - Distance chr3:61182027-61182117
YY1IKZF2NFICIKZF1MTA2DPF2RELBATF2CBX5SKILHNF4AEP300JUNDRAD51EBF1ATF3ETV6ESR1FOSL2MEF2ACREB1TBL1XR1STAT3PKNOX1CREMFOSBHLHE40TCF12BACH1IRF4MYCJUNBPAX5TBX21ATF7BCL11AJUNSMC3BATFRUNX3GABPAPBX3
GH03J061196 - 3:61196112:G:C 0.1905 Promoter - Distance chr3:61196073-61196133
CEBPB
GH03J061249 - 3:61252842:T:C 0.5702 Promoter/Enhancer Elite eQTLs,Distance chr3:61249586-61253847
ASH2LEP400MLLT1RBM39GMEB1AFF1ZNF143CTCFHDAC1ATF7ASH1LRAD51KDM5AL3MBTL2ZNF217HCFC1FOXA2MEF2BNR2C1SIN3AYY1ZHX2FOXK2NRF1PKNOX1NBNCTBP1RBFOX2ESRRAE2F1ZFXIKZF1TBL1XR1DEAF1MNTRAD21RXRACREB1ZBTB33HNRNPLBMI1TAF15ZEB2TBX21MXI1MYCETS1TCF12ELF4CREB3L1CREMZNF263SUZ12KLF5RFX1MAXRCOR1GABPAXRCC5TRIM28SIX5CBFBSP1ZBTB11RNF2E4F1ARNTGABPB1TBPZEB1BHLHE40EBF1ESR1TAF1ZNF207RESTPOLR2APOLR2GATF3WRNIP1IRF4ELF1USF1ELK1HNF4AEP300USF2TFAP4E2F6PAX5MAFKSMC3HSF1SRFMBD2POU2F2ZNF687FOSL2RUNX3PHF8IKZF2IKZF1ZNF592MNTSIN3ARAD51MGACHD4BHLHE40MAXMXI1MYCE2F6EP400EBF1USF2USF1PHF8RESTRBFOX2TBL1XR1TBPASH2LHDAC2AGO1KDM4AEP300PCBP1HNF1APOLR2GBCORSAFBTAF15CTCFRBM39GATAD2BTAF1NR2F6FOXA2ZNF217NR2F1HNRNPLTFAP4PKNOX1U2AF2AGO2ZBTB33RESTZNF143FOXA1HNF4AMAXBACH1RAD21GABPAXRCC5YY1NR2F2HNF4GETV4MITFETS1CREB3L1ATF3E4F1ELF4HCFC1MYCDEAF1ZBTB40SP1E2F1NR2C1ZEB2HNRNPLLNRF1ZHX2ESRRAEBF1SUZ12SMAD5NBNIRF1RXRACREB1DPF2CREMMBD2E2F7ATF7IKZF2TCF12USF1MAFFELF1RB1RFX1GABPB1NANOGSIX5BHLHE40AFF1NEUROD1ARNTPBX3RUNX3POU2F2IRF3SIN3BUSF2FOSIRF4STAT1E2F4JUNDTRIM22RBM25ASH1LTBX21SRFNFYAL3MBTL2E2F8NFYBE2F6MLLT1CHD1CBFBRELBNFRKBCTCFCREB1FOSGATA2ESRRACTCFTBX21BHLHE40
GH03J062168 - 3:62171023:C:T 0.8201 Enhancer - eQTLs chr3:62168819-62171226
GATA3SMARCE1JUNDZFXZBTB40ATF7IKZF1SPI1FOSMEF2BEBF1GATA2EP300ZFX