GWAS Annotated: FOCAD

Gene	GHID	GWAS Hit	Lead SNP	-log10P	Type	Score	Elite	Association Evidence	Location	External Links	TFBSs
FOCAD	GH09J020557	-	9:20558177:C:T	1.0406	Enhancer	215	Elite	C-HiC	chr9:20557903-20559589	ENSR9_B646C, ENSR9_9B6BZ	TRIM28MEF2BEEDSP1JUNDFOSL2FOXA1EBF1JUNBMAFKCEBPBFOSNFE2L2JUNDMNTFOSJUNDEP300
FOCAD	GH09J020610	-	9:20612517:C:T	0.1221	Enhancer	270	Elite	C-HiC	chr9:20610509-20612618	ENSR9_B64G3	FOXA1TCF12SP1SIN3ACTCFSIN3ATBPCEBPBRUNX3JUNBEP300TRIM28RAD21GATA3KDM1ASKIPKNOX1GABPAATF7RESTCTBP1FOSSIX5MBD2FOXA1FOXA2ETS1ATF3RFX1ZBTB33GATA2JUNDTCF12TBPSP1CUX1FOSL2JUNFOXM1EP300STAT3SMARCC2DPF2NEUROD1ARNTNR3C1CEBPBBCL3ARID3ASMARCE1POLR2ASIN3A
FOCAD	GH09J020619	-	9:20620291:A:G	1.0027	Promoter/Enhancer	557	Elite	C-HiC	chr9:20619751-20625051	ENSR9_D32LS, ENSR9_56SXPZ, ENSR9_9B723, ENSR9_9B728, ENSR9_56SZ5K, ENSR9_9B72K, ENSR9_9B72R, ENSR9_56SZHX, MLLT3_1	IKZF2MLLT1RUNX3RAD21EZH2MTA3MYCPOLR2AHDAC6RB1SUZ12ASH2LSIN3AIKZF1YY1ZSCAN29GATAD2BHDAC2EZH2KDM4ARBM39BHLHE40ETV6EP300RNF2RCOR1EBF1MXI1RAD21BHLHE40CTCFPCBP1TAF15ZBTB33SMC3HDAC6ZNF217CTCFSMARCA5SIN3AKDM4ARBFOX2HNRNPLLBACH1AGO2BHLHE40YY1DPF2SP1MYCAGO1RAD21CTBP1NR3C1PCBP1IKZF1ZNF444STAT5AMLLT1KDM1ANRF1PHF8RAD21YY1ZNF207ETS1RBBP5MXI1TBL1XR1TCF7EP300UBTFRESTTAF1SMC3POLR2GSMAD5NR3C1TBPZNF143RBM39MNTPAX5E2F4MAXPKNOX1USF2HNRNPLLNFYBNANOGMYCRFX5TFAP4TBX21TCF12RELBARNTKDM4ATRIM22SKILIKZF2RUNX3MEF2BSTAT5AMAFKE2F4SRFRBBP5SPI1ZEB1EBF1GATAD2BRNF2SUZ12PKNOX1POLR2AGATA1MXI1KDM4AATF3SKILSMC3EP300BACH1ARID3AGATA2RAD21HDAC2TBPIKZF1RFX5NFATC3NFICMTA2NFYBMLLT1ATF2ZNF512BRELBNBNIKZF2CTBP1LCORLEEDBMI1EZH2NCOA3ATF7TRIM22SPI1SMC3PKNOX1CTCFMEF2BSP1IKZF2SIN3AMTA2JUNDNFATC3IKZF1E2F8NBNZNF687NFICRELBPOLR2AATF7GATAD2BKDM5ASKILSMC3STAT5AMXI1TBX21RAD21TRIM22SMARCA5RB1SRFSTAT1ATF2GATA3EEDNR2F6CBFBZNF143RUNX3HNF4GETS1RXRAYY1ELF1MLLT1HDAC2ARNTEP300
FOCAD	GH09J020634	-	None	0.0000	Enhancer	82	-	C-HiC,Distance	chr9:20634361-20634511	-	ZNF217DPF2JUNDMYCRCOR1NCOA3CTBP1GATA3
FOCAD	GH09J020640	-	9:20641088:T:C	0.4961	Enhancer	269	Elite	Distance	chr9:20640041-20641221	ENSR9_B64L7	MLLT1ZNF217SMARCA5MEF2BIKZF1ZSCAN29ZNF592TRIM28MTA3STAT1RELBSTAT5AZNF207TBX21ATF7CBX5GATAD2BMTA2RCOR1SRFSMAD1IKZF2NBNETV6EP300EBF1MXI1ARNTRUNX3BMI1YY1ATF2ARID3ATRIM22RB1TCF12POLR2ABCL3STAT3NFICNFATC1EZH2WRNIP1TBL1XR1JUNBPOU2F2BACH1ZNF384BHLHE40EEDTCF7IRF4TAF1NFATC3CBFBBATFSKILNFIBELF1DPF2ZBED1BRCA1BCL11AJUNDMAFKSMC3CREMCUX1PAX5KLF5SIN3AFOSRAD21ZNF143MAXRAD51HSF1ESRRAUSF2ZNF687NFYBTBPPAX8USF1YY1ZNF592PKNOX1ZBTB40
FOCAD	GH09J020658	-	9:20659271:G:A	0.3552	Promoter/Enhancer	508	Elite	Distance	chr9:20658200-20659401	ENSR9_9B7DH, ENSR9_C43CF, FOCAD_2	MNTFOXA2FOXK2POLR2ASIN3AFOXA1SMARCA5PHF8ZNF217CTCFPRDM10RB1DPF2SMAD1IKZF2MEF2BRELBGATAD2BIKZF1SKILMTA2NFATC3TRIM22ZSCAN29TBX21MLLT1ZNF687NBNBACH1ATF7PKNOX1CLOCKNFRKBYY1CTBP1L3MBTL2EHMT2PKNOX1CTCFPAX8RBFOX2
FOCAD	GH09J020660	-	None	0.0000	Enhancer	1	-	Distance	chr9:20660200-20660400	-	RAD51RBM25NFATC3
FOCAD	GH09J020678	-	9:20678714:T:G	0.6898	Enhancer	126	-	C-HiC,Distance	chr9:20678461-20679489	ENSR9_B64RR	JUNDFOSFOSL2CBFA2T3TCF12GATA2SP1NR2F6BHLHE40CEBPBESRRAPKNOX1
FOCAD	GH09J020682	-	9:20684055:G:C	2.2373	Promoter/Enhancer	554	Elite	C-HiC,Distance	chr9:20682919-20686304	ENSR9_B64SF, ENSR9_8LFC2, ENSR9_56TCN9, ENSR9_B64SJ, ENSR9_9B7N8, FOCAD_1	PKNOX1CTCFZBTB33NCOR1NFATC3STAT3SIN3AL3MBTL2MGAMYCMNTEP400PKNOX1MXI1EP300RAD51MAXFOSATF7TCF12ATF3FOXK2E2F1HDAC1USF2E2F6BHLHE40MLLT1USF1GATA3TBPGATA2CEBPBMAFKYY1CTCFMTA2NRF1HNRNPLLGATAD2BRAD21GATA1RBFOX2CTBP1RB1POLR2GPOLR2AMXI1EGR1SMC3IKZF1FOXM1E2F6BACH1RESTRUNX3ZNF143BHLHE40RUNX1ZNF207PRPF4ZBTB33TRIM22ZBED1NFYBXRCC5AGO1FIP1L1MTA3ESRRARFX5ZNF639IRF1UBTFSP1RBM25MEIS2CREB1HNRNPKHNRNPH1FUSELF1ASH2LTAF1CREMSIN3ABRCA1MNTNR3C1EP300ZNF687HNRNPLTFAP4TBPSOX6TAF15ZNF217HDAC2ZFXSUZ12GATA4FOSL2SKIYY1TCF12TAF7JUNDBCL3KLF5STAT1PHF8CHD1PCBP1HCFC1L3MBTL2SMAD5AGO2ARID3AKDM5BIKZF1POU2F2DPF2SAP30SIN3BRBBP5ATF7CREB3L1EP400NFICRNF2ETS1ZSCAN29NFXL1SMARCA5KDM4AMGASREBF2RUNX3U2AF1EEDSMARCA5MLLT1ZNF143JUNDZNF687FOSL2TAF1FOSTBPATF3ZNF24FOSL1GATA1ZFP91TRIM28POLR2ASP1FOXA2FOXK2JUNDFOSFOSL2MAFKFOXA1STAT3CEBPBNFE2L2PKNOX1MLLT1
FOCAD	GH09J020731	-	9:20733250:A:T	0.8399	Enhancer	105	-	C-HiC,Distance	chr9:20731372-20733310	ENSR9_B654G	FOXP1GABPABCL3ATF3ZBTB33MAFKPOLR2ASP1FOSFOSL2TCF12GATA2FOXA1STAT3
FOCAD	GH09J020759	-	9:20760923:A:C	0.5736	Enhancer	99	-	C-HiC,Distance	chr9:20759799-20760955	-	TRIM28GATA2GATA3STAT3CEBPBFOS
FOCAD	GH09J020784	-	None	0.0000	Enhancer	6	-	C-HiC,Distance	chr9:20784777-20784886	-	-
FOCAD	GH09J020821	-	9:20821958:C:CT	0.0494	Enhancer	9	-	Distance	chr9:20821674-20822014	-	-
FOCAD	GH09J020825	-	9:20825683:A:G	1.1129	Enhancer	1	-	eQTLs,C-HiC,Distance	chr9:20825145-20826062	ENSR9_9B96S	-
FOCAD	GH09J020835	-	9:20836087:AT:A	0.8473	Enhancer	211	-	Distance	chr9:20835392-20836364	ENSR9_9B99W	JUNBFOSRUNX3TBPCEBPBJUNDBATFNR3C1FOXA1NCOR1CREMTBX3NR2F6EP300SOX13GATA4ARID3ATFAP4KDM1AETV4HDAC2TBL1XR1CEBPBTCF7MAFFSMC3RESTSP1HNF4AFOXA1RXRASKIELF1FOXA2
FOCAD	GH09J020853	-	None	0.0000	Enhancer	1	-	C-HiC,Distance	chr9:20853957-20854051	-	-
FOCAD	GH09J020854	-	9:20854667:C:T	1.1707	Enhancer	1	-	C-HiC,Distance	chr9:20854601-20854751	ENSR9_8LJZM	BHLHE40EP300CEBPBPKNOX1
FOCAD	GH09J020872	-	9:20872843:C:T	1.3509	Enhancer	153	Elite	C-HiC,Distance	chr9:20872399-20873636	ENSR9_B65SR, ENSR9_9B9NS	HNRNPKNANOGSP1FOXA2FOSJUNDRUNX3CEBPBRCOR1SMC3MEF2CRAD21SPI1JUND
FOCAD	GH09J020941	-	9:20941310:G:C	0.8652	Enhancer	220	Elite	C-HiC,Distance	chr9:20941000-20941401	ENSR9_B667M, ENSR9_56WZQB	CTCFSMC3RAD21MXI1TCF12ATF7YY1RXRAMAXTRIM22RUNX3SMARCA5ZNF143ZNF592
FOCAD	GH09J020945	-	9:20945468:G:C	0.5338	Enhancer	36	-	Distance	chr9:20945441-20945591	-	-
FOCAD	GH09J020962	-	9:20963340:T:C	1.2788	Enhancer	1	-	Distance	chr9:20962309-20963422	-	-
FOCAD	GH09J020973	-	9:20975007:C:A	0.8893	Enhancer	71	-	Distance	chr9:20973231-20975098	ENSR9_C4478	IKZF2IKZF1MLLT1IKZF1SRF
FOCAD	GH09J020980	-	9:20981800:G:A	0.3311	Enhancer	195	Elite	Distance	chr9:20980532-20982439	-	MEF2BSRFEP300GATAD2BRELBELF1MTA2IKZF2SPI1IKZF1ETV6RUNX3NFICATF2RUNX3EEDFOSPAX5POLR2AYY1GATA3
FOCAD	GH09J020989	-	9:20990100:C:T	1.4125	Enhancer	118	Elite	Distance	chr9:20989852-20991294	ENSR9_8LMWL	SPI1EP300SPI1EP300CEBPB
FOCAD	GH09J021094	-	9:21095079:C:T	0.8398	Enhancer	303	Elite	eRNA_co-expression	chr9:21094434-21097558	ENSR9_8LQ66, ENSR9_B6736	FOXA2ZNF217GATA3PKNOX1DPF2SMARCE1IKZF2MEF2BTCF12EEDSRFBHLHE40ELF1EP300IKZF1RELBRAD51MTA2NFICATF2MEF2AARID3AATF3MYCCREMATF7POLR2ACTCFFOSJUNDCEBPBBATFGATA1EP300FOXA1RUNX3SPI1
FOCAD	GH09J021573	-	9:21583667:A:C	0.6781	Enhancer	419	Elite	TF_co-expression	chr9:21573872-21593957	ENSR9_C45RR, ENSR9_C45S2, ENSR9_9BK9D, ENSR9_9BK9J, ENSR9_9BK9P, ENSR9_8M5LL, ENSR9_B69N2, ENSR9_5744DN, ENSR9_B69NJ, ENSR9_B69NP, ENSR9_B69NT	GATA3TCF12FOSL2MAFKSP1FOSFOXA1BHLHE40NFE2L2MAFFJUNDSIN3ATCF7L2POLR2ACEBPBTBPIKZF1SMC3TBPRUNX3TCF7PKNOX1PKNOX1TCF12SIN3APOLR2ATBPSP1CEBPBFOXA1GABPAMAFKMAFFTCF7L2JUNDFOXA1PKNOX1SP1SIN3ATBPMAFFNFE2L2FOXA1MAFKTCF12BCL3FOXA1PKNOX1ZNF384GATA3TCF12SP1GATA3FOSJUNDFOXA1FOSL2JUNDCEBPBCTCFSIN3AYY1SP1SMC3RAD21FOXA1FOXA1JUNDSIN3ATAF1SP1GABPARESTELF1MAFKJUNDTCF7L2SIN3ATRIM28GATA2POLR2ABCL3ZBTB33GABPASP1ATF3TCF12ETS1RFX5YY1MAFKTAF1TBPRCOR1FOSL2SIX5CEBPBSTAT3FOSNR3C1BHLHE40NFE2L2JUNDMYCMAFFSMC3FOXA1CREB1CTCFJUNBACH1