GWAS Annotated: FREM3

Gene: FRAS1 related extracellular matrix 3

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
FREM3GH04J143230-None0.0000Enhancer76-eRNA_co-expressionchr4:143230843-143230977-
CREMJUNBBATFEP300
FREM3GH04J143558-4:143559119:C:A1.5915Promoter/Enhancer356EliteC-HiCchr4:143558527-143560075ENSR4_B33H8K, ENSR4_538QNQD, ENSR4_B33H8M
CTCFNCOR1GATA1SIN3ATRIM24CEBPBASH2LCBFA2T2TEAD4TCF12CBFA2T3TAL1RESTARID1BZNF384XRCC5YY1NR2F2SMARCA5ZEB1TRIM22RAD21ATF2ZNF143RXRATBPSMC3ZBTB33NR2F6HNF4ASP1POLR2AEGR1RUNX3TAF1MAXHDAC1PHF8HNF4GPKNOX1ZFXHDAC2KDM5AHNRNPLLPOLR2GZHX2KDM1AJUNDCREMTFAP4EP300NFICMXI1RBM39CREB1TAF15RFX5MTA1ZNF384E2F4ZNF687GATAD2BNFYBRBFOX2ELF1SRFARID3APOLR2GIKZF1RNF2CTCFHNRNPLMLLT1RAD21
FREM3GH04J143625-4:143626434:A:G2.3723Enhancer91-eQTLs,C-HiC,Distancechr4:143625518-143627054ENSR4_94527M
NFICMEIS2NFIBNR2F2SP1EP300RXRA
FREM3GH04J143700-4:143700898:C:G1.3857Enhancer71-Distancechr4:143700800-143701200ENSR4_945325
EZH2SUZ12RNF2KDM4ARBBP5RAD21
FREM3GH04J143768-4:143768787:CT:C0.7223Enhancer82-C-HiCchr4:143768005-143769178ENSR4_9453PM
USF1NR2F2JUNDFOSEP300
FREM3GH04J143774-None0.0000Enhancer197-C-HiCchr4:143774087-143774217ENSR4_B33JDM, ENSR4_538S3M5
CTCFEP400ZNF592HDAC1E2F8SOX6SMC3NCOR1ARID1BHMBOX1KDM1AATF7MYCARNTZEB2NR2F1NCOA1NR2F6TRIM22MAXNFICMTA1BHLHE40ZNF316ZNF444HDAC2ESRRAATF2CEBPBNR2C1RESTZNF24TBL1XR1ARID3AJUNDBACH1CBFA2T3CBX1ZNF143ARID2CREB1JUNRAD21FOXM1EP300RB1MLLT1EGR1ATF3HCFC1CC2D1ACBX3MAFKC11orf30CTBP1MAFFEHMT2NFE2CHAMP1CREMCBX5
FREM3GH04J143905-None0.0000Promoter305-C-HiCchr4:143905548-143905608GYPE_1
POLR2AIKZF1GATA1DPF2MNTCBFA2T3ATF7BRD9CTBP1E2F1ARID1BNFATC3ZNF318ZNF24MITFMTA3ZNF592L3MBTL2MLLT1NCOR1AFF1ZSCAN29E4F1MGAFOXM1BCORTAL1CREB3L1RESTRAD51ZNF184TCF12CBFA2T2SMARCA4HDAC1ATF4NR2F1ATF2ZEB2FOXK2HDAC2RNF2SMARCE1MTA1RLFZNF639ATF3ELF4EHMT2ZNF282NCOA2NBNNFICMCM7LEF1MTA2TRIM24ZBTB2ARNTEP400SOX6KDM1AHES1CHAMP1EWSR1MEIS2NCOA1DACH1PKNOX1MYBL2HDAC3ZBTB40TAF9BCC2D1ASMARCC2GATAD2BPHB2
FREM3GH04J143910-4:143912279:C:A0.3740Promoter/Enhancer288EliteC-HiCchr4:143910600-143912601ENSR4_B33K5L, ENSR4_94559D
MLLT1CBFA2T3MEF2BPHF8SMARCA5BACH1IKZF1POLR2AGATAD2BRBFOX2POLR2GZNF687L3MBTL2MGAETV6ELF1GABPAGABPB1ZBTB33
FREM3GH04J143986-4:143986333:C:G0.3858Enhancer1-C-HiCchr4:143986227-143986377--