Regulatory Elements for FTO

Full Name: FTO alpha-ketoglutarate dependent dioxygenase

Location: chr16:53701692-54158512

Date: 2026-02-22 20:17:32

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH16J053703 Promoter/Enhancer 574 Elite Distance chr16:53703191-53705162 ENSR16_9RBJ8, ENSR16_9RBJC, ENSR16_BDMQQ, RPGRIP1L_1, FTO_1
KDM5AFOXA1PHF8KDM4APHF20KDM1AZFXPOLR2AZNF207HDAC1EP400ARID3AAGO1RFX1TAF1MXI1HDAC2HNRNPLLRAD21NR3C1RBM22EP300ZNF143E4F1SIN3AAFF1RBFOX2HNRNPKZBTB7ATAF15SKILPCBP1CHD1TRIM22ZNF282CTCFMNTHCFC1MAXZNF592SIN3BPOLR2GU2AF1U2AF2FOXK2ZNF217TBPIKZF1MYNNATF2YY1RCOR1MYCTCF12BMI1GABPACTBP1MYBTBL1XR1RFX5RB1SRFSTAT1MBD2ELK1TBX3CREMSP1SIX5ETS1HNRNPLGATAD2BSUZ12SKINRF1XRCC5CREB3L1ZBTB11FOXA2RESTMEF2AELF1ARNTE2F4GABPB1FOXA1DACH1ZHX2IRF4RAD51PKNOX1RELBBHLHE40ATF7NEUROD1ZEB2ELF4IRF2ESR1HNF4GJUNDASH1LE2F1CREB1GMEB1CBFBHNF4AESRRADEAF1TFAP4GATA3MAFKETV4NBNHDAC3USF2ZBTB33IRF1FOSMTA1FOSL2EGR1ASH2LZNF444ZNF24BRCA1NR2C1EEDZNF184PYGO2USF1ZBTB40IKZF2CBX3RUNX3HNRNPH1L3MBTL2FOSL1THAP1RBM39MGAARHGAP35ZHX1IRF5ZNF207FIP1L1RNF2TBX21POLR2GKDM4BSAP30PHF8E2F6ZNF384SMARCA4PHF20KDM5ABCORCBFA2T3GATA3ARHGAP35
GH16J053040 Enhancer 388 Elite TF_co-expression chr16:53040838-53046056 ENSR16_C794X, ENSR16_5GGTDG, ENSR16_9R3GX
EHMT2TCF12MCM3SRFHDAC2NANOGCHD7SP1POLR2ASIN3ARBBP5TAF1SUZ12TFAP4ZNF263CHD1GATA3IKZF1EP300SMARCA4HNRNPKMCM2TRIM22NFXL1PHF21AKDM1APOLR2APCBP2EGR1ZNF143EP300POLR2AZNF316CHD1MAFKCHD1RFX5RBM39POLR2ASIN3AZNF143CTCFRFX1JUNDTAF1NANOGHNRNPLTBPE4F1ASH2LYY1CHD7KDM1ASP1NR3C1ESR1RAD21FOXA2RXRAEP300FOXA1USF1ESR1FOXA1POLR2AJUNDGATA3FOXA1ESR1
GH16J053778 Enhancer 369 Elite C-HiC,Distance chr16:53778575-53783407 ENSR16_83KNNS, ENSR16_9RCCQ
SP1ZKSCAN1ZMYM3YY1FOSPOLR2ATCF12STAT3SP1FOXA2ATF3KDM1AZNF217FOXK2JUNDNR2F6FOXA1CTBP1ARID3ADPF2HNF4AESR1RXRAMBD2SMARCE1TCF7EP300TBX3ZNF384FOSL2CEBPBGATA3SP1RXRARAD21GATA3FOXA1FOXA2HNF4G
GH16J054058 Enhancer 366 Elite Distance chr16:54058701-54060209 None
TRIM28GATA3PKNOX1LEF1ARNTCTBP1L3MBTL2RCOR1
GH16J053911 Enhancer 355 Elite Distance chr16:53911748-53914204 ENSR16_9RDQM, ENSR16_BDNTX, ENSR16_83KRKB
CTCFSPI1MYCFOXA1HNF4AFOSIKZF2TRIM22DPF2STAT3NFATC3BHLHE40MTA2RUNX3EP300TBX21FOSBCL11APOLR2AMYCIKZF1PKNOX1CTCFTRIM22TBX21MTA2EP300POLR2AYY1STAT3JUNDHNF4AATF3CEBPBNFE2L2FOSMAFKRAD21ELF1
GH16J053952 Enhancer 353 Elite Distance chr16:53952388-53954281 ENSR16_BDP4M
YY1SP1MEIS2RXRAMAXHNF4AMYCIRF1IRF2STAT3FOSGATA3
GH16J053772 Enhancer 351 Elite Distance chr16:53772788-53774899 ENSR16_BDN5P, ENSR16_5GMHDL
MAXCTCFCHD4KDM5AZNF384GATA1TRIM28RAD21HNF4ASP1FOXA2SMC3ZNF316ASH2LPOLR2ARESTGATA3TRIM22MAFKGATA2ARID3ANFE2FOXA1MYCDACH1ZNF143STAT3NFE2L2MAFFPKNOX1MNTTBX3TFAP4KDM1AZKSCAN1EP300HNF1ATCF7NR2F6FOXA2FOXA1
GH16J054079 Enhancer 351 Elite eQTLs,Distance chr16:54079758-54081683 ENSR16_BDPR7
ASH2LPOLR2ACUX1NRF1TBPCREMZHX2GATA3XRCC5DPF2BCL3KDM1AZNF687SP1FOSEGR1TFAP4MNTCREB1HNF4ASKIATF7MAXJUNDMBD2TBX3SOX13STAT3ARID3AZNF217FOXA2MAFKFOXA1EP300ETV4HNF1ANEUROD1RXRARNF2SMARCE1ETS1CTBP1NCOA3TCF7HNF4GCCAR2MYCNFE2L2MAFFFOSL2BHLHE40HDAC2TCF12ESR1CEBPBRAD21SMC3NR2F6NR3C1USF1USF2FOXA2FOXA1ESR1
GH16J053775 Enhancer 340 Elite C-HiC,Distance chr16:53775215-53777921 ENSR16_BDN64
ATF3RAD51SPI1GATA3GATA2NR2F2RCOR1CTCFJUNDESR1CREMTCF12TCF7L2FOSL2KDM1AZBTB33RESTSKIFOXA1FOXA2TCF7NR2F6TBX3KAT2BASH2LBCL3YY1MAFKMAFFPOLR2ARXRARAD21NR3C1HNF4AEP300ZNF24TBPMAXHDAC2ARID3ASP1ESR1SMC3MYCCTCFCEBPBHNF4GFOSGATA3FOXA1ZNF316FOXA1MAFKMAFF
GH16J053767 Enhancer 320 Elite Distance chr16:53767863-53770101 ENSR16_BDN52
SMARCE1SIN3ATCF7L2POLR2AKDM1AARID1BJUNBGABPAFOSBCL3JUNDJUNATF3ETS1SIX5BATFRESTDPF2GATA3STAT3FOSL2TCF12FOXA1MYCSP1RFX1BHLHE40ESR1NR3C1EP300HDAC2KDM1AZMYM3RBM25PKNOX1
GH16J053743 Enhancer 319 Elite C-HiC,Distance chr16:53743965-53746758 ENSR16_9RBZ5, ENSR16_5GMBG8, ENSR16_C7BZS
CREMMTA2ETV4EP300JUNDCREB1TBX3FOXP1CTCFTCF7ELF1SPI1FOXA2ARID3AFOXA1FOSL2GATA3TCF7L2POLR2AFOSSTAT3EP300IKZF2IKZF1ETV6ARID3ARUNX3JUNBJUNDBATFFOSCTCFSP1RAD51NFYBZNF143USF2USF1MITF
GH16J053755 Enhancer 317 Elite Distance chr16:53755200-53757353 ENSR16_9RC49, ENSR16_BDN3B
PKNOX1CTCFSTAT3FOSRAD51USF1MYCCHD4CEBPBKDM1ANCOR1EP300SP1HNF4ATCF7L2HNRNPUL1TFAP4ARID3AFOXA1SOX13HNF1AESR1FOXA2JUNDNR3C1PKNOX1
GH16J053990 Enhancer 312 Elite Distance chr16:53990967-53992861 ENSR16_C7CMM
SMARCA4CREMPKNOX1EP300FOXA2RAD21FOXA1SP1
GH16J053880 Enhancer 292 Elite Distance chr16:53880463-53882963 ENSR16_9RDFP
RBFOX2L3MBTL2ASH2LRFX1ZNF592FOXA1EP400ATF7POLR2AJUNDNR2F1HDAC1CHD4FOSTBPPOLR2GSP1MYCATF4SKIRXRANCOR1RAD21TBX3TFAP4STAT3ARID3AATF3TRIM24HNF1ACEBPBEP300SMC3HNF4GHNF4AFOXA2HDAC2NR2F6FOXA1KDM1AEHMT2CTCFHNF1A
GH16J053946 Enhancer 277 Elite Distance chr16:53946515-53947398 ENSR16_9RF5N
CTCFCHD4PKNOX1
GH16J053960 Enhancer 267 Elite Distance chr16:53960145-53962031 None
GATA3TRIM28GATA2RAD21ZNF384CTCFPKNOX1
GH16J054076 Enhancer 267 Elite Distance chr16:54076853-54078209 ENSR16_BDPQP
PKNOX1USF2USF1SP1STAT3POLR2AFOSL2CREB1FOSJUNDMYCRCOR1POLR2AGATA2
GH16J053765 Enhancer 265 Elite Distance chr16:53765661-53767720 ENSR16_9RC7J
EHMT2ASH2LZHX2ZNF24KDM1AHDAC2ZMYM3CHD4TBX3MITFSKIMAXNR2F6TFAP4TBL1XR1RBFOX2CREMBHLHE40TCF7EP300USF2USF1MAFKSP1RAD51FOXA1RXRAFOXA2NCOR1ETV4FOSL2JUNDATF3NFE2L2STAT3FOSKAT2B
GH16J053892 Enhancer 264 Elite Distance chr16:53892000-53892401 ENSR16_BDNQW, ENSR16_5GN8R7
GATA3GATA2CTCFFOSL2RAD21TRIM22RESTSMC3HDAC2ZNF143FOXA2EP300
GH16J053894 Enhancer 264 Elite Distance chr16:53894199-53894401 ENSR16_9RDKD
JUNDZNF316FOSMAFKC11orf30STAT3MAFFNFE2L2MYCBHLHE40RAD21CEBPBFOXA1
GH16J053864 Enhancer 254 Elite Distance chr16:53864115-53867101 ENSR16_BDNM2
NFIBNFICLCORLDPF2FOSFOSL2MYCBACH1JUNDNFE2STAT3MAFKPOLR2AMTA2SPI1IKZF1IRF4SOX6JUNBSTAT3DPF2SP1FOSHDAC1ZNF24HMBOX1ETV6SMARCE1MTA1C11orf30ARID1BZEB2BATFNCOR1TAL1E4F1NCOA1FOXA1EP300MTA2GATA2FOXK2NR3C1JUNDTCF12KDM1AJUNMAFKPKNOX1CBFA2T3SMARCA4ZNF316CHAMP1FOXM1MEIS2GATAD2ACUX1EHMT2ATF7CREB1ATF2
GH16J053914 Enhancer 242 Elite Distance chr16:53914288-53916386 None
ELF1MAFK
GH16J054049 Enhancer 235 Elite Distance chr16:54049116-54052195 ENSR16_D4NDX, ENSR16_83KWJ5
GATA3GATA2L3MBTL2EP300PKNOX1YY1RCOR1MNTHDAC2EGR1SP1JUNDCTBP1PKNOX1ZNF384JUNDCEBPB
GH16J053947 Enhancer 233 Elite Distance chr16:53946028-53946178 ENSR16_83KS8S, ENSR16_5GNL2J
CTCFKDM5ASKICHD4SMC3RESTARID3AEHMT2TRIM22ZNF143ATF7RAD21YY1SPI1KLF16EP300HNRNPKATF2ATF4ELF1ZNF384CEBPBFOXA1FOXA2ATF3JUND
GH16J054026 Enhancer 199 Elite Distance chr16:54026412-54028556 ENSR16_BDPHG
GATA2CEBPBFOSL2JUNDFOSTBPMAFKNFE2L2CEBPBGATA2GATA3
GH16J053815 Enhancer 195 Elite eQTLs,Distance chr16:53815937-53818968 ENSR16_83KPGP, ENSR16_C7C73
NR3C1ZNF24TCF12SIN3AJUNDTBPMYCBHLHE40CEBPBSMC3FOSRAD21FOSL2SP1GATA3RCOR1JUNDSIN3A
GH16J053923 Enhancer 194 Elite Distance chr16:53923211-53923604 ENSR16_9RDTQ
PKNOX1
GH16J053820 Enhancer 192 Elite Distance chr16:53820938-53823806 ENSR16_C7C7C, ENSR16_9RCRT
FOSJUNDSP1FOSL2FOSCTCFCEBPBCBFA2T3HDAC1MEIS2MITFKDM1ANFICCTCFRUNX3
GH16J053895 Enhancer 187 Elite Distance chr16:53895300-53895912 None
RAD21EP300
GH16J054109 Enhancer 187 Elite Distance chr16:54109941-54110955 None None
GH16J054062 Enhancer 153 Elite Distance chr16:54062466-54062638 ENSR16_C7CSR, ENSR16_5GPBZJ
CTCFRAD21SMC3EP300MXI1GATA3
GH16J053664 Enhancer 118 Elite Distance chr16:53664210-53666083 None
IRF4BATFJUNBFOSRUNX3USF2CEBPBBHLHE40
GH16J054134 Enhancer 118 Elite Distance chr16:54134904-54136793 ENSR16_BDQ47
GATA3FOSJUNDSTAT3GATA2STAT3
GH16J053784 Enhancer 98 Elite C-HiC,Distance chr16:53784408-53784558 ENSR16_9RCDL
JUNDFOSMTA2
GH16J054053 Enhancer 63 Elite Distance chr16:54053468-54053618 None None
GH16J054067 Enhancer 232 - Distance chr16:54067356-54067711 None
KDM1ASKICREMHDAC2FOXA1NR2F6FOXA2TCF7ARID3ATBL1XR1EP300
GH16J054040 Enhancer 198 - Distance chr16:54040641-54040758 None
CHD4EHMT2CREMKDM1AFOXA2SP1HNF4GEP300USF1HDAC2ELF1ETV4RAD21HNF4A
GH16J053692 Enhancer 173 - Distance chr16:53692403-53693644 None
CTCFZNF24ZFP91HMBOX1TRIM22RAD21SMC3TCF7L2MAFKC11orf30ZNF316
GH16J053732 Enhancer 171 - Distance chr16:53732068-53733159 ENSR16_BDMWS
TRIM28GABPATCF7L2BCL3ATF3NFXL1ZBTB33GATA2SP1RXRAJUNDELF1ZNF217RESTGATA3ETS1TCF12RCOR1DPF2CBFA2T3SIN3ANCOA3CREB1NR2F2RAD21ESR1FOXA2SMARCE1FOXA1NR3C1CTBP1MBD2FOSL2MAFKCEBPBZNF24
GH16J053713 Enhancer 166 - Distance chr16:53713349-53715380 ENSR16_83KM99, ENSR16_BDMS7
MAFKMAFFZNF263FOXA1TRIM28CREMEP300CTBP1ARNTSMARCA4
GH16J054125 Enhancer 151 - Distance chr16:54125248-54125378 None
KDM1AYY1RXRARAD21ZBTB33FOXA2HNF4AEGR1SP1ATF3CHD4ZNF384FOXA1NRF1JUNDGATA3POLR2ACEBPB
GH16J054126 Enhancer 146 - Distance chr16:54125674-54126598 ENSR16_9RH3J
CHD4YY1ZBTB33JUNDRAD21HNF4AHNF4GRESTMAXRXRAFOXA2SP1ATF3EGR1ZMYM3
GH16J053808 Enhancer 126 - C-HiC,Distance chr16:53808717-53810057 ENSR16_BDNBX
JUNDCTCFPKNOX1GATA3MAFKFOXA1CEBPB
GH16J053982 Enhancer 121 - Distance chr16:53982074-53984383 None
YY1RXRASP1GATA3RESTNR2F6NR2F2RAD21HNF4AFOXA1JUNDZNF384FOSFOXA2
GH16J054105 Enhancer 111 - Distance chr16:54105893-54106356 None
CEBPBSMARCA4TBX3
GH16J053741 Enhancer 105 - C-HiC,Distance chr16:53741417-53742790 None
CHD4ASH2LZBTB40HNF4AMAFFARID3AFOXA1FOXP1FOXA2CTCF
GH16J053899 Enhancer 105 - Distance chr16:53899086-53900307 None
HNF4AARID3AFOXA1CEBPBFOXA2ZNF384SP1HNF4A
GH16J053726 Enhancer 99 - Distance chr16:53726385-53727245 ENSR16_9RBQX
TRIM28NR2C1NR2F6NR2F2SMARCA4NR2F1FOXM1MYBL2RFX5PKNOX1
GH16J053931 Enhancer 99 - Distance chr16:53931797-53935221 None
CTCFPKNOX1FOXA2EP300
GH16J054055 Enhancer 99 - Distance chr16:54055571-54057459 None
GATA2EHMT2FOSJUNDMAFK
GH16J053872 Enhancer 82 - Distance chr16:53872275-53873406 ENSR16_9RDC8
SPI1SPI1JUNDCEBPBFOSMAFK
GH16J053987 Enhancer 71 - Distance chr16:53987598-53990662 None
ZKSCAN1
GH16J053723 Enhancer 63 - Distance chr16:53723038-53723373 None
SMARCA4
GH16J053986 Enhancer 63 - Distance chr16:53986852-53987077 None
RCOR1
GH16J054022 Enhancer 63 - Distance chr16:54022578-54022906 None None
GH16J053804 Enhancer 56 - Distance chr16:53804400-53804800 None
SPI1FOXA2EP300FOXA1ZNF384
GH16J053978 Enhancer 56 - Distance chr16:53978951-53980902 None
HMBOX1
GH16J054072 Enhancer 56 - Distance chr16:54072035-54072982 None
SMARCA4EP300
GH16J054098 Enhancer 56 - eQTLs,Distance chr16:54098738-54100045 None
HNF4G
GH16J053694 Enhancer 36 - Distance chr16:53694771-53695852 None
BCL3FOSNFE2L2
GH16J053789 Enhancer 36 - Distance chr16:53789288-53789438 ENSR16_9RCG3
CTCFCEBPB
GH16J053827 Enhancer 36 - Distance chr16:53827888-53827958 ENSR16_83KPPF
NANOG
GH16J053935 Enhancer 36 - Distance chr16:53935559-53936639 None None
GH16J053936 Enhancer 36 - Distance chr16:53936648-53936798 None None
GH16J053968 Enhancer 36 - Distance chr16:53968124-53969348 ENSR16_9RFCX
SMC3CEBPBSMARCA4
GH16J053994 Enhancer 36 - Distance chr16:53994908-53996749 None None
GH16J053874 Enhancer 9 - Distance chr16:53874259-53874324 None None
GH16J053666 Enhancer 1 - Distance chr16:53666666-53667621 ENSR16_9RB5L
FOXA1
GH16J053846 Enhancer 1 - Distance chr16:53846800-53847400 None None
GH16J053904 Enhancer 1 - Distance chr16:53904385-53905686 None
JUNDRUNX3TCF7
GH16J053964 Enhancer 1 - Distance chr16:53964548-53964698 None
RXRA
GH16J053971 Enhancer 1 - Distance chr16:53971311-53972227 None
CTCF
GH16J054057 Enhancer 1 - Distance chr16:54057610-54058233 None None
GH16J054123 Enhancer 1 - Distance chr16:54123574-54124458 None None