GWAS Annotated Elements: FTO

Gene: FTO alpha-ketoglutarate dependent dioxygenase

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH16J053040 - 16:53044095:G:A 1.8662 Enhancer Elite TF_co-expression chr16:53040838-53046056
EHMT2TCF12MCM3SRFHDAC2NANOGCHD7SP1POLR2ASIN3ARBBP5TAF1SUZ12TFAP4ZNF263CHD1GATA3IKZF1EP300SMARCA4HNRNPKMCM2TRIM22NFXL1PHF21AKDM1APOLR2APCBP2EGR1ZNF143EP300POLR2AZNF316CHD1MAFKCHD1RFX5RBM39POLR2ASIN3AZNF143CTCFRFX1JUNDTAF1NANOGHNRNPLTBPE4F1ASH2LYY1CHD7KDM1ASP1NR3C1ESR1RAD21FOXA2RXRAEP300FOXA1USF1ESR1FOXA1POLR2AJUNDGATA3FOXA1ESR1
GH16J053664 - 16:53664390:C:T 0.6670 Enhancer Elite Distance chr16:53664210-53666083
IRF4BATFJUNBFOSRUNX3USF2CEBPBBHLHE40
GH16J053666 - 16:53667452:C:T 0.7715 Enhancer - Distance chr16:53666666-53667621
FOXA1
GH16J053692 - 16:53692910:A:C 0.3049 Enhancer - Distance chr16:53692403-53693644
CTCFZNF24ZFP91HMBOX1TRIM22RAD21SMC3TCF7L2MAFKC11orf30ZNF316
GH16J053694 - 16:53694797:C:G 0.1167 Enhancer - Distance chr16:53694771-53695852
BCL3FOSNFE2L2
GH16J053703 - 16:53703648:G:A 0.7905 Promoter/Enhancer Elite Distance chr16:53703191-53705162
KDM5AFOXA1PHF8KDM4APHF20KDM1AZFXPOLR2AZNF207HDAC1EP400ARID3AAGO1RFX1TAF1MXI1HDAC2HNRNPLLRAD21NR3C1RBM22EP300ZNF143E4F1SIN3AAFF1RBFOX2HNRNPKZBTB7ATAF15SKILPCBP1CHD1TRIM22ZNF282CTCFMNTHCFC1MAXZNF592SIN3BPOLR2GU2AF1U2AF2FOXK2ZNF217TBPIKZF1MYNNATF2YY1RCOR1MYCTCF12BMI1GABPACTBP1MYBTBL1XR1RFX5RB1SRFSTAT1MBD2ELK1TBX3CREMSP1SIX5ETS1HNRNPLGATAD2BSUZ12SKINRF1XRCC5CREB3L1ZBTB11FOXA2RESTMEF2AELF1ARNTE2F4GABPB1FOXA1DACH1ZHX2IRF4RAD51PKNOX1RELBBHLHE40ATF7NEUROD1ZEB2ELF4IRF2ESR1HNF4GJUNDASH1LE2F1CREB1GMEB1CBFBHNF4AESRRADEAF1TFAP4GATA3MAFKETV4NBNHDAC3USF2ZBTB33IRF1FOSMTA1FOSL2EGR1ASH2LZNF444ZNF24BRCA1NR2C1EEDZNF184PYGO2USF1ZBTB40IKZF2CBX3RUNX3HNRNPH1L3MBTL2FOSL1THAP1RBM39MGAARHGAP35ZHX1IRF5ZNF207FIP1L1RNF2TBX21POLR2GKDM4BSAP30PHF8E2F6ZNF384SMARCA4PHF20KDM5ABCORCBFA2T3GATA3ARHGAP35
GH16J053713 - 16:53713483:A:C 1.2252 Enhancer - Distance chr16:53713349-53715380
MAFKMAFFZNF263FOXA1TRIM28CREMEP300CTBP1ARNTSMARCA4
GH16J053723 - None 0.0000 Enhancer - Distance chr16:53723038-53723373
SMARCA4
GH16J053726 - 16:53727000:A:C 0.1479 Enhancer - Distance chr16:53726385-53727245
TRIM28NR2C1NR2F6NR2F2SMARCA4NR2F1FOXM1MYBL2RFX5PKNOX1
GH16J053732 - None 0.0000 Enhancer - Distance chr16:53732068-53733159
TRIM28GABPATCF7L2BCL3ATF3NFXL1ZBTB33GATA2SP1RXRAJUNDELF1ZNF217RESTGATA3ETS1TCF12RCOR1DPF2CBFA2T3SIN3ANCOA3CREB1NR2F2RAD21ESR1FOXA2SMARCE1FOXA1NR3C1CTBP1MBD2FOSL2MAFKCEBPBZNF24
GH16J053741 - 16:53742028:A:G 0.4330 Enhancer - C-HiC,Distance chr16:53741417-53742790
CHD4ASH2LZBTB40HNF4AMAFFARID3AFOXA1FOXP1FOXA2CTCF
GH16J053743 - 16:53746190:C:T 0.3940 Enhancer Elite C-HiC,Distance chr16:53743965-53746758
CREMMTA2ETV4EP300JUNDCREB1TBX3FOXP1CTCFTCF7ELF1SPI1FOXA2ARID3AFOXA1FOSL2GATA3TCF7L2POLR2AFOSSTAT3EP300IKZF2IKZF1ETV6ARID3ARUNX3JUNBJUNDBATFFOSCTCFSP1RAD51NFYBZNF143USF2USF1MITF
GH16J053755 - 16:53756269:C:G 0.8430 Enhancer Elite Distance chr16:53755200-53757353
PKNOX1CTCFSTAT3FOSRAD51USF1MYCCHD4CEBPBKDM1ANCOR1EP300SP1HNF4ATCF7L2HNRNPUL1TFAP4ARID3AFOXA1SOX13HNF1AESR1FOXA2JUNDNR3C1PKNOX1
GH16J053765 - 16:53767584:A:AT 1.1566 Enhancer Elite Distance chr16:53765661-53767720
EHMT2ASH2LZHX2ZNF24KDM1AHDAC2ZMYM3CHD4TBX3MITFSKIMAXNR2F6TFAP4TBL1XR1RBFOX2CREMBHLHE40TCF7EP300USF2USF1MAFKSP1RAD51FOXA1RXRAFOXA2NCOR1ETV4FOSL2JUNDATF3NFE2L2STAT3FOSKAT2B
GH16J053767 - 16:53769244:G:A 0.9168 Enhancer Elite Distance chr16:53767863-53770101
SMARCE1SIN3ATCF7L2POLR2AKDM1AARID1BJUNBGABPAFOSBCL3JUNDJUNATF3ETS1SIX5BATFRESTDPF2GATA3STAT3FOSL2TCF12FOXA1MYCSP1RFX1BHLHE40ESR1NR3C1EP300HDAC2KDM1AZMYM3RBM25PKNOX1
GH16J053772 - 16:53773852:A:G 0.7747 Enhancer Elite Distance chr16:53772788-53774899
MAXCTCFCHD4KDM5AZNF384GATA1TRIM28RAD21HNF4ASP1FOXA2SMC3ZNF316ASH2LPOLR2ARESTGATA3TRIM22MAFKGATA2ARID3ANFE2FOXA1MYCDACH1ZNF143STAT3NFE2L2MAFFPKNOX1MNTTBX3TFAP4KDM1AZKSCAN1EP300HNF1ATCF7NR2F6FOXA2FOXA1
GH16J053775 - 16:53775949:A:G 0.8764 Enhancer Elite C-HiC,Distance chr16:53775215-53777921
ATF3RAD51SPI1GATA3GATA2NR2F2RCOR1CTCFJUNDESR1CREMTCF12TCF7L2FOSL2KDM1AZBTB33RESTSKIFOXA1FOXA2TCF7NR2F6TBX3KAT2BASH2LBCL3YY1MAFKMAFFPOLR2ARXRARAD21NR3C1HNF4AEP300ZNF24TBPMAXHDAC2ARID3ASP1ESR1SMC3MYCCTCFCEBPBHNF4GFOSGATA3FOXA1ZNF316FOXA1MAFKMAFF
GH16J053778 - 16:53780558:C:T 1.3935 Enhancer Elite C-HiC,Distance chr16:53778575-53783407
SP1ZKSCAN1ZMYM3YY1FOSPOLR2ATCF12STAT3SP1FOXA2ATF3KDM1AZNF217FOXK2JUNDNR2F6FOXA1CTBP1ARID3ADPF2HNF4AESR1RXRAMBD2SMARCE1TCF7EP300TBX3ZNF384FOSL2CEBPBGATA3SP1RXRARAD21GATA3FOXA1FOXA2HNF4G
GH16J053784 - 16:53784548:G:T 0.5623 Enhancer Elite C-HiC,Distance chr16:53784408-53784558
JUNDFOSMTA2
GH16J053789 - None 0.0000 Enhancer - Distance chr16:53789288-53789438
CTCFCEBPB
GH16J053804 - 16:53804746:G:A 1.4783 Enhancer - Distance chr16:53804400-53804800
SPI1FOXA2EP300FOXA1ZNF384
GH16J053808 - 16:53808800:G:A 1.2419 Enhancer - C-HiC,Distance chr16:53808717-53810057
JUNDCTCFPKNOX1GATA3MAFKFOXA1CEBPB
GH16J053815 - 16:53816991:C:T 0.9532 Enhancer Elite eQTLs,Distance chr16:53815937-53818968
NR3C1ZNF24TCF12SIN3AJUNDTBPMYCBHLHE40CEBPBSMC3FOSRAD21FOSL2SP1GATA3RCOR1JUNDSIN3A
GH16J053820 - 16:53822032:T:C 0.7529 Enhancer Elite Distance chr16:53820938-53823806
FOSJUNDSP1FOSL2FOSCTCFCEBPBCBFA2T3HDAC1MEIS2MITFKDM1ANFICCTCFRUNX3
GH16J053827 - None 0.0000 Enhancer - Distance chr16:53827888-53827958
NANOG
GH16J053846 - 16:53847132:C:T 0.1611 Enhancer - Distance chr16:53846800-53847400 -
GH16J053864 - 16:53865651:C:T 0.7294 Enhancer Elite Distance chr16:53864115-53867101
NFIBNFICLCORLDPF2FOSFOSL2MYCBACH1JUNDNFE2STAT3MAFKPOLR2AMTA2SPI1IKZF1IRF4SOX6JUNBSTAT3DPF2SP1FOSHDAC1ZNF24HMBOX1ETV6SMARCE1MTA1C11orf30ARID1BZEB2BATFNCOR1TAL1E4F1NCOA1FOXA1EP300MTA2GATA2FOXK2NR3C1JUNDTCF12KDM1AJUNMAFKPKNOX1CBFA2T3SMARCA4ZNF316CHAMP1FOXM1MEIS2GATAD2ACUX1EHMT2ATF7CREB1ATF2
GH16J053872 - 16:53872315:G:A 0.7544 Enhancer - Distance chr16:53872275-53873406
SPI1SPI1JUNDCEBPBFOSMAFK
GH16J053874 - None 0.0000 Enhancer - Distance chr16:53874259-53874324 -
GH16J053880 - 16:53880515:C:G 0.5133 Enhancer Elite Distance chr16:53880463-53882963
RBFOX2L3MBTL2ASH2LRFX1ZNF592FOXA1EP400ATF7POLR2AJUNDNR2F1HDAC1CHD4FOSTBPPOLR2GSP1MYCATF4SKIRXRANCOR1RAD21TBX3TFAP4STAT3ARID3AATF3TRIM24HNF1ACEBPBEP300SMC3HNF4GHNF4AFOXA2HDAC2NR2F6FOXA1KDM1AEHMT2CTCFHNF1A
GH16J053892 - None 0.0000 Enhancer Elite Distance chr16:53892000-53892401
GATA3GATA2CTCFFOSL2RAD21TRIM22RESTSMC3HDAC2ZNF143FOXA2EP300
GH16J053894 - None 0.0000 Enhancer Elite Distance chr16:53894199-53894401
JUNDZNF316FOSMAFKC11orf30STAT3MAFFNFE2L2MYCBHLHE40RAD21CEBPBFOXA1
GH16J053895 - None 0.0000 Enhancer Elite Distance chr16:53895300-53895912
RAD21EP300
GH16J053899 - 16:53900060:C:T 1.2354 Enhancer - Distance chr16:53899086-53900307
HNF4AARID3AFOXA1CEBPBFOXA2ZNF384SP1HNF4A
GH16J053904 - 16:53905491:G:A 1.0304 Enhancer - Distance chr16:53904385-53905686
JUNDRUNX3TCF7
GH16J053911 - 16:53913958:G:A 0.6203 Enhancer Elite Distance chr16:53911748-53914204
CTCFSPI1MYCFOXA1HNF4AFOSIKZF2TRIM22DPF2STAT3NFATC3BHLHE40MTA2RUNX3EP300TBX21FOSBCL11APOLR2AMYCIKZF1PKNOX1CTCFTRIM22TBX21MTA2EP300POLR2AYY1STAT3JUNDHNF4AATF3CEBPBNFE2L2FOSMAFKRAD21ELF1
GH16J053914 - 16:53914586:CA:C 0.6049 Enhancer Elite Distance chr16:53914288-53916386
ELF1MAFK
GH16J053923 - None 0.0000 Enhancer Elite Distance chr16:53923211-53923604
PKNOX1
GH16J053931 - 16:53932151:A:G 0.3494 Enhancer - Distance chr16:53931797-53935221
CTCFPKNOX1FOXA2EP300
GH16J053935 - 16:53936268:C:A 1.0001 Enhancer - Distance chr16:53935559-53936639 -
GH16J053936 - None 0.0000 Enhancer - Distance chr16:53936648-53936798 -
GH16J053947 - None 0.0000 Enhancer Elite Distance chr16:53946028-53946178
CTCFKDM5ASKICHD4SMC3RESTARID3AEHMT2TRIM22ZNF143ATF7RAD21YY1SPI1KLF16EP300HNRNPKATF2ATF4ELF1ZNF384CEBPBFOXA1FOXA2ATF3JUND
GH16J053946 - 16:53946762:C:A 0.1763 Enhancer Elite Distance chr16:53946515-53947398
CTCFCHD4PKNOX1
GH16J053952 - 16:53953703:A:G 0.5215 Enhancer Elite Distance chr16:53952388-53954281
YY1SP1MEIS2RXRAMAXHNF4AMYCIRF1IRF2STAT3FOSGATA3
GH16J053960 - 16:53960728:C:T 1.8003 Enhancer Elite Distance chr16:53960145-53962031
GATA3TRIM28GATA2RAD21ZNF384CTCFPKNOX1
GH16J053964 - None 0.0000 Enhancer - Distance chr16:53964548-53964698
RXRA
GH16J053968 - None 0.0000 Enhancer - Distance chr16:53968124-53969348
SMC3CEBPBSMARCA4
GH16J053971 - 16:53971662:A:G 0.4399 Enhancer - Distance chr16:53971311-53972227
CTCF
GH16J053978 - 16:53979566:T:C 0.6702 Enhancer - Distance chr16:53978951-53980902
HMBOX1
GH16J053982 - 16:53984189:G:A 0.2984 Enhancer - Distance chr16:53982074-53984383
YY1RXRASP1GATA3RESTNR2F6NR2F2RAD21HNF4AFOXA1JUNDZNF384FOSFOXA2
GH16J053986 - None 0.0000 Enhancer - Distance chr16:53986852-53987077
RCOR1
GH16J053987 - 16:53990277:G:A 1.7966 Enhancer - Distance chr16:53987598-53990662
ZKSCAN1
GH16J053990 - 16:53992292:A:T 0.2336 Enhancer Elite Distance chr16:53990967-53992861
SMARCA4CREMPKNOX1EP300FOXA2RAD21FOXA1SP1
GH16J053994 - 16:53995666:A:C 1.2213 Enhancer - Distance chr16:53994908-53996749 -
GH16J054022 - 16:54022837:T:G 0.1271 Enhancer - Distance chr16:54022578-54022906 -
GH16J054026 - 16:54027242:C:A 1.4133 Enhancer Elite Distance chr16:54026412-54028556
GATA2CEBPBFOSL2JUNDFOSTBPMAFKNFE2L2CEBPBGATA2GATA3
GH16J054040 - 16:54040678:A:G 1.2075 Enhancer - Distance chr16:54040641-54040758
CHD4EHMT2CREMKDM1AFOXA2SP1HNF4GEP300USF1HDAC2ELF1ETV4RAD21HNF4A
GH16J054049 - 16:54051515:C:T 0.8621 Enhancer Elite Distance chr16:54049116-54052195
GATA3GATA2L3MBTL2EP300PKNOX1YY1RCOR1MNTHDAC2EGR1SP1JUNDCTBP1PKNOX1ZNF384JUNDCEBPB
GH16J054053 - 16:54053584:G:A 0.1435 Enhancer Elite Distance chr16:54053468-54053618 -
GH16J054055 - 16:54056117:C:A 1.2102 Enhancer - Distance chr16:54055571-54057459
GATA2EHMT2FOSJUNDMAFK
GH16J054057 - 16:54057653:G:A 1.1662 Enhancer - Distance chr16:54057610-54058233 -
GH16J054058 - 16:54059269:G:T 1.1541 Enhancer Elite Distance chr16:54058701-54060209
TRIM28GATA3PKNOX1LEF1ARNTCTBP1L3MBTL2RCOR1
GH16J054062 - 16:54062570:G:T 0.1359 Enhancer Elite Distance chr16:54062466-54062638
CTCFRAD21SMC3EP300MXI1GATA3
GH16J054067 - 16:54067492:G:A 1.0886 Enhancer - Distance chr16:54067356-54067711
KDM1ASKICREMHDAC2FOXA1NR2F6FOXA2TCF7ARID3ATBL1XR1EP300
GH16J054072 - 16:54072059:G:A 1.0338 Enhancer - Distance chr16:54072035-54072982
SMARCA4EP300
GH16J054076 - 16:54077097:C:T 0.9307 Enhancer Elite Distance chr16:54076853-54078209
PKNOX1USF2USF1SP1STAT3POLR2AFOSL2CREB1FOSJUNDMYCRCOR1POLR2AGATA2
GH16J054079 - 16:54080305:C:T 1.2195 Enhancer Elite eQTLs,Distance chr16:54079758-54081683
ASH2LPOLR2ACUX1NRF1TBPCREMZHX2GATA3XRCC5DPF2BCL3KDM1AZNF687SP1FOSEGR1TFAP4MNTCREB1HNF4ASKIATF7MAXJUNDMBD2TBX3SOX13STAT3ARID3AZNF217FOXA2MAFKFOXA1EP300ETV4HNF1ANEUROD1RXRARNF2SMARCE1ETS1CTBP1NCOA3TCF7HNF4GCCAR2MYCNFE2L2MAFFFOSL2BHLHE40HDAC2TCF12ESR1CEBPBRAD21SMC3NR2F6NR3C1USF1USF2FOXA2FOXA1ESR1
GH16J054098 - 16:54099888:C:T 0.6118 Enhancer - eQTLs,Distance chr16:54098738-54100045
HNF4G
GH16J054105 - None 0.0000 Enhancer - Distance chr16:54105893-54106356
CEBPBSMARCA4TBX3
GH16J054109 - None 0.0000 Enhancer Elite Distance chr16:54109941-54110955 -
GH16J054123 - 16:54124029:C:T 0.2148 Enhancer - Distance chr16:54123574-54124458 -
GH16J054125 - None 0.0000 Enhancer - Distance chr16:54125248-54125378
KDM1AYY1RXRARAD21ZBTB33FOXA2HNF4AEGR1SP1ATF3CHD4ZNF384FOXA1NRF1JUNDGATA3POLR2ACEBPB
GH16J054126 - 16:54126166:T:C 0.6978 Enhancer - Distance chr16:54125674-54126598
CHD4YY1ZBTB33JUNDRAD21HNF4AHNF4GRESTMAXRXRAFOXA2SP1ATF3EGR1ZMYM3
GH16J054134 - 16:54134981:G:A 0.0927 Enhancer Elite Distance chr16:54134904-54136793
GATA3FOSJUNDSTAT3GATA2STAT3