GWAS Annotated Elements: GALNT18

Gene: polypeptide N-acetylgalactosaminyltransferase 18

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH11J011147 - 11:11148015:C:T 1.0537 Enhancer Elite eQTLs chr11:11147401-11149197
ZNF316CTCFATF3MITFPOLR2AEP300JUNDUSF1ZNF143RAD21TAF1USF2RXRANR2F2YY1SP1CEBPBTCF12NR3C1FOXA1HNF4A
GH11J011149 - 11:11149576:G:A 0.8966 Enhancer Elite eQTLs chr11:11149253-11150750
CEBPB
GH11J011279 - 11:11280148:C:G 0.4272 Enhancer Elite Distance chr11:11279667-11281005
HDAC2FOSNANOGFOXA1FOXA2
GH11J011304 - 11:11304757:G:A 0.3406 Enhancer - Distance chr11:11304589-11304835
PKNOX1USF1
GH11J011313 - 11:11313968:C:T 0.4858 Enhancer Elite Distance chr11:11313058-11314932
CTCFRAD21CTCFBHLHE40C11orf30ZNF316FOSMYCSP1NFE2L2MAFKEP300CEBPBNFE2POLR2AYY1JUNDRXRAHNF4ANR2F2
GH11J011347 - None 0.0000 Enhancer - Distance chr11:11347673-11347823 -
GH11J011348 - 11:11348846:C:A 1.3347 Enhancer - Distance chr11:11348580-11350683
TEAD4NR2F2TAL1CBFA2T2CBFA2T3SP1RCOR1RXRARAD21EP300NR2F2RESTGATA2FOSMAFK
GH11J011357 - 11:11357108:G:A 0.4760 Enhancer - Distance chr11:11356999-11357383 -
GH11J011370 - 11:11370367:A:C 0.0581 Enhancer - Distance chr11:11370000-11370400
CEBPBATF7MTA2SPI1
GH11J011391 - 11:11391708:C:T 0.9513 Enhancer Elite Distance chr11:11391471-11392583
ZMYM3KDM1ARCOR1RBM25CTCFFOSL2BHLHE40FOSUSF2MYCCEBPBEZH2REST
GH11J011395 - 11:11397213:A:C 1.0957 Enhancer Elite Distance chr11:11395804-11397415
ATF3ATF2JUNDATF7FOSBHLHE40SMC3CEBPBCTCF
GH11J011400 - 11:11400360:G:A 1.4919 Enhancer - C-HiC,Distance chr11:11400273-11400423 -
GH11J011401 - 11:11401000:G:T 0.7159 Enhancer - C-HiC,Distance chr11:11400993-11401143
CTCFRAD21YY1SMC3ZNF143
GH11J011409 - 11:11407177:G:A 0.1000 Enhancer Elite Distance chr11:11407073-11407403
EZH2RXRAHNF4AEP300POLR2AGATA2RCOR1RFX5MXI1SPI1SMARCA4CTCF
GH11J011407 - 11:11407643:G:C 0.5527 Enhancer Elite eQTLs,Distance chr11:11407533-11407683
EZH2POLR2AGATA2RCOR1RFX5SMARCA4CTCFEP300RAD21
GH11J011408 - 11:11409168:G:C 0.4782 Enhancer - Distance chr11:11408903-11409697
GATA2GATA1
GH11J011415 - 11:11417006:C:G 0.5984 Enhancer Elite Distance chr11:11415633-11417163
EP300IKZF2IKZF1EEDRUNX3GABPASPI1FOSL2STAT3JUNDMYCCEBPBFOS
GH11J011421 - 11:11422424:T:C 1.1642 Enhancer - Distance chr11:11421782-11422811
FOXA2FOXA1STAT3CEBPBMYC
GH11J011426 - 11:11427902:T:C 0.1243 Enhancer Elite Distance chr11:11426240-11428329
CTCFFOSNFICLCORLNFIB
GH11J011429 - 11:11431314:C:T 0.4105 Enhancer - Distance chr11:11429333-11432343
EZH2
GH11J011450 - 11:11451898:C:T 1.3891 Enhancer - Distance chr11:11450155-11452408
ZNF263MAFKRCOR1CEBPBATF3FOSL2JUNDFOSBHLHE40CTCFNFYBSP1RESTCEBPBRAD21GABPAPKNOX1TRIM22NR2F2JUNDNCOR1ZBTB33CUX1ARID3AYY1HNF4ARXRAEGR1NR2F6DPF2FOXA1ZBTB40HNF1AHNF4GKLF5
GH11J011454 - None 0.0000 Enhancer - Distance chr11:11454793-11454923
ZNF217SIN3ADPF2CTBP1GATA3MNTFOSNCOA3ESR1FOXA1MYCPKNOX1
GH11J011462 - 11:11463992:A:G 0.4222 Enhancer - Distance chr11:11462892-11464270
ZNF263TRIM28SMARCA4PKNOX1RCOR1MEIS2ARNTCTBP1
GH11J011501 - 11:11502488:G:A 0.5506 Enhancer - Distance chr11:11501328-11503086
POLR2ASMARCA4MXI1SP1SMC3RAD21HNF4ARXRAEP300
GH11J011510 - 11:11511116:T:TC 0.4415 Enhancer - Distance chr11:11510613-11511760
EP300POLR2ASMARCA4CEBPB
GH11J011512 - None 0.0000 Enhancer - Distance chr11:11512233-11512383
POLR2ASMARCA4
GH11J011513 - None 0.0000 Enhancer - Distance chr11:11512527-11512923
SMARCA4POLR2A
GH11J011516 - None 0.0000 Enhancer - Distance chr11:11513033-11513183 -
GH11J011515 - 11:11513449:T:C 0.2316 Enhancer - Distance chr11:11513413-11513763
PKNOX1CEBPBSTAT3EP300
GH11J011514 - 11:11514333:T:C 0.5172 Enhancer - Distance chr11:11513979-11514858
REST
GH11J011520 - 11:11520922:A:G 0.2121 Enhancer - Distance chr11:11520910-11521229 -
GH11J011521 - 11:11521474:C:T 0.1647 Enhancer - Distance chr11:11521281-11522007 -
GH11J011532 - None 0.0000 Enhancer - Distance chr11:11532713-11532863 -
GH11J011534 - 11:11536651:C:CA 0.4269 Enhancer Elite Distance chr11:11534713-11536894
CTCFRAD21EP300EZH2POLR2A
GH11J011537 - 11:11539220:G:A 1.5886 Enhancer Elite C-HiC,Distance chr11:11537198-11539322
TRIM28MXI1NR2F2SP1SMARCA4POLR2ARAD21ZNF263
GH11J011543 - 11:11543456:C:T 1.6427 Enhancer - Distance chr11:11543164-11544570 -
GH11J011545 - None 0.0000 Enhancer - Distance chr11:11545753-11545963
CTCFMEF2BSMARCA4EBF1
GH11J011552 - 11:11552263:T:C 1.2634 Enhancer Elite Distance chr11:11552234-11553314
CTCF
GH11J011557 - 11:11557910:G:A 0.3031 Enhancer - Distance chr11:11557378-11558194
CTCF
GH11J011558 - 11:11558847:G:A 1.1044 Enhancer - Distance chr11:11558325-11559659
CTCFMYCEP300IKZF1
GH11J011561 - 11:11562792:C:G 1.6501 Enhancer - Distance chr11:11561825-11563906
ATF2MNT
GH11J011567 - 11:11568164:G:A 1.2783 Enhancer Elite C-HiC,Distance chr11:11567354-11571175
RAD51FOSMYCUSF2EP300ZNF687ATF7JUNDEP300STAT3FOSUSF2IKZF1RAD51SREBF1POLR2AFOSSTAT3BATFMYCPKNOX1IKZF2IKZF1GABPANR2F2SPI1TAF1RAD21MAXSP1CTCFRESTPOLR2AFOSFOS
GH11J011577 - 11:11577532:G:C 0.2474 Enhancer Elite Distance chr11:11577400-11577600
POLR2ARESTFOS
GH11J011578 - 11:11579480:T:C 0.7023 Enhancer - eQTLs,Distance chr11:11578500-11579935
SMARCA4CTCFNR2F2RAD21YY1MAX
GH11J011580 - 11:11580629:T:G 0.7511 Enhancer - eQTLs,Distance chr11:11580272-11583618
YY1MAXRAD21NR2F6NR2F2EZH2HNF4AHNF4GRXRASP1SMARCA4MXI1GATA2ZNF316SMARCA4RAD21EZH2
GH11J011583 - 11:11585139:G:T 0.4754 Enhancer Elite C-HiC,Distance chr11:11583875-11585608
EZH2IKZF1SPI1NR3C1EZH2EP300FOXA1USF2TCF12RCOR1MYCJUNDFOSBHLHE40MAFKFOSL2SP1FOSCEBPB
GH11J011587 - 11:11587375:T:C 0.3202 Enhancer Elite C-HiC,Distance chr11:11587094-11587712
EP300
GH11J011592 - None 0.0000 Enhancer - C-HiC,Distance chr11:11592289-11592917
EP300
GH11J011608 - 11:11608669:T:C 0.1015 Enhancer - eQTLs,Distance chr11:11608478-11609380
FOSL2FOSJUNDNFICNFIBSMAD1CTCFLCORL
GH11J011611 - 11:11611438:A:T 0.3787 Enhancer - Distance chr11:11611345-11612007 -
GH11J011619 - None 0.0000 Enhancer - Distance chr11:11619113-11619263
CTCFSP1TRIM22RXRAPOLR2AMEF2BRAD21MNTMXI1BHLHE40L3MBTL2RAD51CLOCKMITF
GH11J011620 - 11:11621145:G:A 0.5491 Promoter/Enhancer Elite eQTLs,eRNA_co-expression,Distance chr11:11620143-11623237
NR3C1ZNF263KDM4ANRF1MXI1IKZF1ELF1POLR2ATAF1YY1SP1RAD21EZH2TRIM28STAT3MAXEP300CTCFDPF2ZFXRBBP5MXI1MTA2RAD51BHLHE40ZNF687L3MBTL2EP300RAD21HDAC2USF2RUNX3YY1SUZ12MYCUSF1BACH1ZNF143ETS1SMC3HDAC6MNTZNF207ZBTB33SIN3ARBM22EGR1KDM4ARNF2TAF1MXI1RESTEP300SIN3ARFX1CTBP1PKNOX1RAD21CTCFBACH1SMC3MYCUBTFATF7TAF7ELF1FUSTBPSTAT1PCBP1YY1DPF2SP1L3MBTL2MBD2HNRNPKXRCC5TCF12RBM25E2F6IRF3NRF1NEUROD1NFYBMEF2BIRF1PBX3CREMNR3C1ZBTB7AZNF143RBM39RB1RBBP5IKZF2HNRNPLLRELBIKZF1GATAD2BEGR1EBF1KDM4ABHLHE40GATA2FOXA2EP300FOXA1NR3C1POLR2A
GH11J011657 - None 0.0000 Enhancer - C-HiC chr11:11657673-11657823 -
GH11J011972 - 11:11982821:T:C 1.1091 Enhancer Elite eQTLs chr11:11972542-11984168
ESR1TCF7L2RESTHNF4APOLR2ANR2F2YY1SP1RXRAEP300JUNDRAD21ATF3GATA1STAT3POLR2ARBM25ZMYM3CTCFRAD21RXRAMAXHNF4AHNF4GNR2F2SP1SP1ETS1TAF1TCF12PKNOX1JUNDFOSL2EP300POLR2ARESTRAD21ESR1FOSSIN3ANR3C1TBPSPI1ZMYM3POLR2AL3MBTL2SMARCA4NR2C1RCOR1RAD51RESTUSF2CTCFUSF1GABPB1GATA2IKZF1FOSSMC3RCOR1YY1RFX5RAD21CEBPBSIN3ANR3C1SMC3HNF4AGATA2POLR2AFOSYY1FOSFOXA1JUNDEP300