GWAS Annotated: GPSM2

Gene: G protein signaling modulator 2

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GPSM2GH01J108827-1:108827892:C:T0.7639Enhancer364EliteC-HiCchr1:108827792-108832641ENSR1_5XL5JP
CHAMP1CTCFDPF2ESRRAZBTB2ATF7ARNTHES1L3MBTL2CREB1HDAC1HDAC2NBNMGASMC3MLLT1MNTCC2D1AMAXHNRNPUL1RAD51NCOA1TRIM22ZNF217MYCCLOCKMITFXRCC5RAD21HNF4ASKILZNF263LEF1FOXK2YY1ZNF444ARID2BHLHE40IKZF1USF1ATF3ZNF143USF2RESTRB1TCF12JUNDCTBP1POLR2AFOSEP300STAT3NR3C1FOXA1FOSCHD1ATF3CREB1MEIS2USF2YY1HNF4AFOXA1JUNDRCOR1ARID3ANCOR1RAD21EP300ZBTB33NR2F2RXRAFOXA2ESRRACEBPBSP1HNF4GNR2F6TRIM28MTA3ZNF579HDAC1POLR2AGATA3YY1ATF7NRF1L3MBTL2CTBP1MNTIKZF1GMEB1SIN3ARFX5GATA2ZNF217ZBTB2MAXTRIM24NBNDPF2UBTFSMARCC2TEAD4CLOCKFOSNR2F1MTA2MYCTCF7ATF2E2F1SOX6MBD2CBX3BCORATF3EGR1JUNDHDAC2GABPAZNF687RCOR1MYNNESRRAPRDM10TCF12LEF1NEUROD1SREBF1MTA1JUNEP300FOSL2JUNBZNF318SMARCA4TAF1CREB1SMARCE1CEBPBRESTARID1BBHLHE40HES1SMC3TBPCBX5CBFA2T3KDM1AMAFKNR2F2ZNF24ZEB2ZHX2CTCFFOSL1NR3C1CREMRAD21RNF2TBL1XR1MEIS2CBFA2T2NFE2PKNOX1THRANR2F2RXRAFOXA1FOSNR3C1EP300GATA2CEBPBATF4MYCSTAT3FOS
GPSM2GH01J108845-1:108846620:G:A0.8910Enhancer82-eQTLs,C-HiCchr1:108845120-108847284ENSR1_857DXN
CTCFFOSMYCSTAT3RESTIKZF1GATA3ZNF316
GPSM2GH01J108851-1:108852483:C:T1.0194Enhancer63EliteeQTLschr1:108851336-108853200ENSR1_93L7JQ
CEBPBEP300MGA
GPSM2GH01J108857-1:108859002:T:C1.4309Enhancer36-Distancechr1:108857916-108859537ENSR1_93L7LH
ZBTB33
GPSM2GH01J108875-1:108879279:C:T1.8996Promoter/Enhancer637EliteDistancechr1:108875922-108879847ENSR1_93L7RJ, ENSR1_5XLFR3, ENSR1_BRLDT, ENSR1_CDRNZ, ENSR1_857FML, GPSM2_1, GPSM2_2
CTCFEP300CBX1ZBTB33NFRKBIKZF1MIER1KDM5AE2F8ELF4E4F1FOXK2ZEB2ZBTB40ZSCAN29NBNSMARCA5ARHGAP35NFXL1SMARCA4MTA1NFATC3CREMZNF407CHD4PYGO2ZFP91ZNF24AFF1ZBTB5DPF2MTA2ZNF639IKZF2TAL1ARNTZNF318CLOCKHES1HDAC1HDAC2NCOR1EHMT2TCF12TRIM24ZNF184BRD9TRIM28MLLT1KDM1AZNF592BCORZNF217ZNF579ZNF830NR2F1ARID1BSKILRCOR1ZNF444PKNOX1RBM39CHAMP1ZNF143ZNF263NRF1EP400CC2D1ARBFOX2POLR2AE2F1PHF8POLR2GGATA3FOXM1YY1ESRRATAF1EP300SIN3ARFX1KDM5BKDM4BAGO1ASH2LZBTB33CREB3L1JUNDRFX5MEIS2GATAD2BSP1MBD2PHF21AXRCC5CBX5CBX1CREB1CTBP1PBX3MYBL2ZNF639FIP1L1RBM25MNTZBTB2SMAD5GMEB1HNRNPLLMGAATF7MEF2BTBPE2F4IRF1MAXNFYBHNRNPUL1RAD21MYCGABPB1U2AF2HCFC1RAD51RB1U2AF1ELF1MTA3SOX6L3MBTL2MXI1RESTCBFA2T2BACH1HNRNPKE2F6THAP1TRIM22EGR1IKZF1TAF15BHLHE40SMARCA5SAP30FUSMITFRBM34RBBP5ETS1SAFBZBTB7AATF3JUNUSF1ZNF282SMARCE1ARID3AUSF2NFE2L2SREBF1RUNX1ZSCAN29RBM22KDM4AZNF24ZEB1RUNX3RLFSMARCA4NBNARID2NCOA6MLLT1HNRNPLLNFICZNF830RNF2TRIM24E2F7GATA2KDM1AEBF1GATA3PHF21AHMBOX1CBX3NBNHDAC1GATA2GATA3FOXM1CTCFGATAD2BTHRAJUNBPKNOX1KDM1AMXI1HDAC1MYCHDAC2NR2F1EGR1ZBTB33PRDM10
GPSM2GH01J108880-1:108881354:A:G0.3904Enhancer121-Distancechr1:108880768-108881590ENSR1_857FNT, ENSR1_93L7T3
HDAC1MIER1CHAMP1RESTAFF1CTCFHMBOX1GATA3GATA2EHMT2MYCFOSCEBPB
GPSM2GH01J108889-1:108889466:C:T0.2229Enhancer130-eQTLs,Distancechr1:108889200-108890000-
SMARCE1IKZF1HDAC1KDM1AATF7SPI1HMBOX1C11orf30GATA2SOX6ARID1BNR2F2E4F1EP300SMARCE1HNF4AATF4ZNF263
GPSM2GH01J108896-None0.0000Enhancer1-Distancechr1:108896400-108896600--
GPSM2GH01J108898-None0.0000Enhancer126-Distancechr1:108898238-108898388-
CTCFWRNIP1RAD21SMC3NCOA1CC2D1ATRIM22JUNDRB1ARID2KLF16MYCRESTZNF143FOS
GPSM2GH01J108913-None0.0000Enhancer203-Distancechr1:108913258-108913408ENSR1_93L878
SIN3ANRF1ZNF263GATA1ZNF24CTBP1EP400DACH1IKZF1SMARCE1MNTFOXK2SOX6HDAC1TRIM24FOXM1GMEB1PMLSMARCA4TRIM28TAF9BSMC3E2F1KDM1ATCF12DPF2HDAC2TAL1C11orf30NCOR1CBFA2T2ARNTNFICARID1BMTA2SMAD1CHAMP1GATAD2BZNF316TEAD4AFF1NFATC3PKNOX1HMBOX1EP300MEIS2MYCCBFA2T3SMARCC2MAFKNCOA2JUNDMAFFE4F1CUX1HDAC3TBL1XR1STAT2ARID3AJUNSTAT1NFE2STAT5AZSCAN29RNF2EWSR1IRF1MIER1
GPSM2GH01J108925-1:108925498:C:G2.0303Enhancer36-eQTLs,eRNA_co-expression,Distancechr1:108925181-108925848--
GPSM2GH01J108947-1:108948416:T:C1.1855Promoter/Enhancer298EliteDistancechr1:108947680-108949283ENSR1_93L8KC, CLCC1_3
CHD7POLR2ANANOGASH2LRBBP5
GPSM2GH01J108949-None0.0000Promoter94-Distancechr1:108949889-108949949CLCC1_2-
GPSM2GH01J108956-1:108956778:G:A0.4238Enhancer111-Distancechr1:108956568-108957403ENSR1_BRLSG
ZBTB33DPF2ARID1BSMARCA4C11orf30NFICZNF316ZNF384IKZF1RFX1MEIS2
GPSM2GH01J109132-1:109138539:A:G0.7602Enhancer361EliteeQTLschr1:109132580-109139948ENSR1_857M59, ENSR1_93LBKB, ENSR1_BRMRP
PKNOX1CEBPBRFX1BMI1IKZF1HNF4ARAD21GABPAIKZF2DPF2RXRAEGR1SP1ELF1FOXA2SPI1ZNF274POLR2ACBFA2T3GATA1ATF7HDAC2CREB3L1SMARCE1MTA3SMARCA4NBNL3MBTL2ZNF24ZBTB2ZNF592ZNF282ZBTB7AAFF1NCOR1LEF1NRF1ZEB2MNTCBFA2T2TCF12RESTCC2D1AMLLT1NCOA1NR2F1PTBP1E4F1TBL1XR1HDAC1SMARCC2KDM1AHMBOX1MTA1CBX3TAL1MAXHDAC3ARNTETS1CUX1RLFZSCAN29ZNF639MTA2ARID1BZBED1RNF2GATAD2BYY1RCOR1TRIM24ZNF316TEAD4MXI1RFX5RUNX1GATAD2AZKSCAN1PHF20NFICZNF384PHB2UBTFGATA2NEUROD1DACH1CREMEP300PHF21APRDM10ETV6THAP1CTBP1PMLIKZF1E2F6CEBPBJUNDSTAT5AKLF16STAT1GABPAFOXK2FOXM1SOX6IRF1E2F7MYNNTRIM28SMC3BCORNR2F2BHLHE40NFE2TRIP13ELF4CTCFELF1NFICNR2F6FOXA1SP1TRIM24EP300HDAC2RXRAHNF4GHNF4ATCF12ZNF217ZFXGATA3MBD2RFX1DPF2CTBP1NCOA3CREB1ARID1BPOLR2AZEB2TCF12ZBTB2CBFA2T2MEIS2TEAD4GATA3SP1CBFA2T3SOX6HNF4A
GPSM2GH01J109801-1:109802817:C:A0.6618Enhancer222EliteeQTLschr1:109801837-109803576-
CBFA2T3NR2F1NR2F6TAL1CTCFNR2F2TCF12CBFA2T3SMARCA4GABPACBFA2T2