GWAS Annotated Elements: GRIA1

Gene: glutamate ionotropic receptor AMPA type subunit 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH05J153350 - 5:153350848:G:C 0.8587 Enhancer - eRNA_co-expression chr5:153350830-153351068 -
GH05J153463 - 5:153463587:G:A 0.0722 Enhancer - C-HiC,Distance chr5:153463575-153464737
HNF4AFOSCEBPBMAFK
GH05J153490 - None 0.0000 Promoter/Enhancer Elite Distance chr5:153490200-153490800
CTCFRAD21SMC3MXI1ASH2LEP300USF1RBBP5TBPSIN3AKDM4ACHD1
GH05J153512 - 5:153513873:C:T 1.1685 Enhancer - eQTLs,C-HiC,Distance chr5:153512927-153514256 -
GH05J153516 - 5:153517847:G:C 0.0901 Enhancer - C-HiC,Distance chr5:153516940-153517982
SMARCA4
GH05J153521 - 5:153521126:G:T 0.8631 Enhancer - eQTLs,C-HiC,Distance chr5:153521080-153521230
JUND
GH05J153522 - 5:153524457:C:CT 0.3659 Enhancer - C-HiC,Distance chr5:153522475-153524550
NR2F2RXRACEBPBNFICLCORLNFIB
GH05J153551 - 5:153552390:T:C 0.3844 Enhancer Elite Distance chr5:153551039-153553114
USF1RAD21EP300ASH2LFOXA1SP1SMC3POLR2AMXI1CHD1NFE2L2STAT3C11orf30MAFKFOSATF3MITFJUNDBHLHE40FOSL2MYCBACH1USF2JUNUSF1TAF1
GH05J153562 - 5:153562663:T:C 0.1247 Enhancer - eQTLs,Distance chr5:153562034-153562793
ZFXFOSJUND
GH05J153583 - 5:153584160:A:G 1.6524 Enhancer - Distance chr5:153583764-153584870 -
GH05J153618 - 5:153618849:T:C 1.5551 Enhancer Elite eQTLs,Distance chr5:153618783-153620500
GATA1SMARCA4ATF7GATA2NR2F6CREB1JUNDTAL1ATF3ATF2EP300JUNCREMNFE2ARID1BFOSDPF2NR2F1ESRRAGATA2ESRRAJUNDFOSEP300
GH05J153627 - 5:153629748:G:A 2.4236 Enhancer Elite eQTLs,Distance chr5:153627361-153630622
NR2F2GATA2MAXMXI1SIN3AFOSJUNDCTCFRXRAEP300MAFKRAD21NFE2L2NR3C1TAF1RESTEGR1STAT3USF2SMC3BHLHE40MYCNR3C1EP300CBFA2T3
GH05J153659 - None 0.0000 Enhancer - Distance chr5:153659097-153659570
JUNDRAD21FOS
GH05J153742 - None 0.0000 Enhancer - Distance chr5:153742160-153742310
MNTARID1BDPF2RLFHDAC1HDAC2CBFA2T3TAL1E4F1PMLTCF12SMARCA4IKZF1NBNGMEB1NFATC3KDM1ACC2D1AMTA1ARNTRNF2ZSCAN29BRD9NCOA1SMARCC2MYCBCORCHAMP1FOXM1PHB2NCOR1LEF1ZNF639SMARCE1NR2F2EGR1POLR2ANFRKBFOXK2RFX1NEUROD1MLLT1TRIM28CBFA2T2STAT5AEHMT2ZEB2ZBTB2MTA3MEIS2TBL1XR1MTA2GATAD2AZBTB5EP300HMBOX1TEAD4SMARCB1TRIM24JUNPKNOX1ATF3BHLHE40RAD51JUNDCTBP1MITFNFICHES1SOX6FOSL1ZNF24NR2C1
GH05J153748 - 5:153748934:T:C 0.8564 Enhancer - eRNA_co-expression,Distance chr5:153748815-153748947
NCOR1TCF12CBFA2T3HDAC2TAL1ARID1B
GH05J153782 - 5:153782613:C:G 3.6246 Enhancer - Distance chr5:153782240-153783430
RBM25MEIS2CBFA2T3CTCFRAD21JUNDJUNSMC3RCOR1EP300RAD21CTCF