GWAS Annotated Elements: GRIK1

Gene: glutamate ionotropic receptor kainate type subunit 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH21J029089 - 21:29092135:G:C 1.1712 Enhancer Elite eQTLs chr21:29089801-29093369
IKZF1HDAC1MTA1ZBTB2NFATC3RNF2MLLT1NFXL1ARHGAP35PHB2TRIM24ZNF24GATAD2BCTCFNCOA4HNRNPKPCBP2ZFP91SMC3RAD21TRIM22E2F1HNF4AZNF592ZNF143SRFSKIRESTMEF2ARXRAARID3AZNF384RAD21FOXA2JUNBCEBPBFOSSTAT3FOXA1JUNDBHLHE40SMC3HNF4AYY1KDM1ANR2F2JUNDARID3ASP1ZBTB33MAXFOXA2RXRAGABPAATF3RAD21RESTHNF4GTAF1CTCFDPF2GATA2SMARCA4SMC3ZNF384
GH21J029552 - 21:29552693:AGAAAT:A 0.3074 Enhancer - eRNA_co-expression,Distance chr21:29552656-29552980 -
GH21J029555 - None 0.0000 Enhancer - Distance chr21:29555595-29555823
ZNF316POLR2APMLNR2F2SMAD5TAF7FOXK2
GH21J029557 - None 0.0000 Enhancer - Distance chr21:29557400-29557600
IKZF1JUNBIRF4SPI1BATF
GH21J029564 - None 0.0000 Enhancer - Distance chr21:29564618-29565209 -
GH21J029580 - None 0.0000 Enhancer - Distance chr21:29580757-29582345
RFX1BMI1C11orf30MAFFMAFKZNF316MAFKMAFF
GH21J029595 - 21:29595188:C:A 0.0387 Enhancer - eRNA_co-expression,Distance chr21:29595061-29595366 -
GH21J029614 - None 0.0000 Enhancer - Distance chr21:29613140-29613290
CEBPBSMARCE1SMARCA4EHMT2NR2F6CUX1JUNDCBX5
GH21J029613 - 21:29614106:G:A 0.6687 Enhancer - Distance chr21:29613960-29614110
GATAD2BNCOR1HDAC2SMARCA4NR2F1NFICTCF12TAL1IKZF1TEAD4EP300NR2F6CBFA2T2ARID1BCBFA2T3NR2F2
GH21J029634 - 21:29635026:C:T 1.1172 Enhancer - Distance chr21:29634471-29635619
CHAMP1RFX1NCOR1MEIS2ZNF592MYCZEB2SMARCA4HDAC2CBFA2T3PKNOX1MEIS2L3MBTL2
GH21J029637 - None 0.0000 Enhancer Elite Distance chr21:29637795-29637964
HMBOX1L3MBTL2MAXCHAMP1TCF12SMARCA4NFE2ZNF592ATF4ZNF316
GH21J029639 - 21:29639452:G:A 0.9819 Enhancer Elite Distance chr21:29639400-29641017
IKZF2ZNF24CEBPBHMBOX1ZNF592IKZF1ARID1BNCOR1MYCTCF12TEAD4TAL1C11orf30ZNF316MAFKMNTZNF384BHLHE40MITFTRIM24ZBTB40SOX6L3MBTL2WHSC1GMEB1E4F1RFX1SMARCA5NFRKBBRD9ARID1BKDM1ARBM25TRIM24CC2D1ATAF9BMNTZNF143
GH21J029641 - 21:29642615:C:T 1.1046 Enhancer Elite Distance chr21:29641604-29642891
TAF9BMNTMYBL2ZNF592MGAYY1NRF1NFRKBBCORZMYM3RFX1ZNF592ATF7DPF2CREB3L1ARID1BHDAC2UBTFRBFOX2ZNF24ZEB2E4F1NBNTCF12ZBTB2ZNF282HDAC1NFATC3MNTARNTCTBP1MYCHMBOX1GMEB1TAL1POLR2ANR2F1NR2F6FOXK2GATA1ZNF384ESRRASMARCA4TBPNCOR1TAF9BMTA3NR2C1CBX3MTA1E2F1MBD2NCOA2RESTCBX1CEBPBRNF2SMARCE1MTA2MITFPHB2RCOR1NCOA6TBL1XR1GABPAMYNNZNF830SMAD1HES1IKZF1YY1IRF1SOX6NFICZNF639STAT2RUNX1ATF3TRIM24TEAD4ZBTB11GATAD2BEP300PMLCTCFZKSCAN1JUNE2F6FOXM1EP400CHAMP1MYBL2BRD9NCOA1SMAD5MAFKHCFC1SMARCC2LEF1MLLT1MEIS2KDM1AUSF2MAXSTAT5ATRIM28L3MBTL2RAD51KLF16AFF1NR2F2GATA2CREMCUX1MGAPKNOX1BRD4BHLHE40NFE2JUNDCC2D1AHDAC3BCORNEUROD1ETV6NFRKBZBTB33YY1NEUROD1GATA2ARID1BMLLT1SMARCA4SMARCE1ZEB2NCOR1
GH21J029647 - 21:29647609:T:G 0.4393 Enhancer Elite Distance chr21:29647352-29647690
BRD4POLR2ANFRKBZNF592MNTL3MBTL2HMBOX1KDM1AEP400PYGO2ZNF24NRF1HNRNPLLATF7ARNTZSCAN29GMEB1ESRRANR2F1ATF2CTBP1NFATC3E4F1SKILNR2F6MITFPHF8IKZF1HDAC1AFF1DPF2GABPB1TAF9BE2F1NR2C1ZNF318EGR1SOX6NCOR1NFICCREB1SMARCA4ZEB2LEF1UBTFCC2D1AMTA1MBD2ARID2NBNZBTB2EHMT2PMLARID1BBRD9RNF2ATF3FOXM1POLR2GMTA2TRIM24TRIM28SMAD5TBL1XR1MLLT1MAFKNFE2L2RAD51TCF12CREMRESTMAXKLF16CBX3SMARCC2C11orf30MEIS2GATA2TAL1PKNOX1FOXK2ZKSCAN1MYCFOSMAFFCDC5LSMAD1NCOA1SMARCE1ARID3AHDAC2JUNBSTAT5AJUNMTA3CUX1TBPATF4GATA1ZNF316EP300NR2F2NEUROD1BHLHE40MXI1CEBPBJUNDIRF2RFX1NFE2IRF1TEAD4FOSL1MEF2ARBFOX2
GH21J029648 - 21:29649069:C:T 1.5029 Enhancer Elite Distance chr21:29648038-29650480
ZNF316ZNF830GATAD2BKDM5BZNF592ARNTTRIP13NFRKBGATA1SMARCC2MTA2ZNF24IRF2ESRRAIRF1RBFOX2MEIS2CREB3L1HDAC2THRASMARCA4IKZF1POLR2AMNTEP400ELF1SMAD5HMBOX1NR2C1SMARCC2TAF9BNFATC3L3MBTL2ELF4ZEB2MTA3DPF2NR2F6GMEB1MGAKDM1AARID1BHDAC3ZBTB2CC2D1AETV6TRIM24NRF1ATF7UBTFNBNETS1BCORPHB2FOXM1MBD2CBX3SMAD1NCOA2HDAC1MYCIRF2TBL1XR1ARNTZNF184MLLT1NCOR1AFF1JUNKLF16YY1RCOR1RNF2EGR1MYNNMAXTAL1TCF12TRIM28FOXK2ARID3ASTAT2ZNF318SPI1EP300ZNF24MEIS2IRF1GABPAGABPB1E2F1NFE2NCOA1HNRNPLLSMARCE1SKILATF2GATA1TEAD4E2F6ZSCAN29CUX1CHAMP1RESTSOX6ZBTB40STAT5ATBPBRD9ZNF384MTA2NEUROD1CTBP1CREMNFICZNF316NR2F2CEBPBMAFKGATA2HES1ATF4PMLATF3E4F1JUNDBHLHE40LEF1C11orf30RFX1SIN3BSP1NR3C1UBTFSMARCA4HDAC1MLLT1TAL1PKNOX1HMBOX1MTA3RNF2CTBP1L3MBTL2ZSCAN29
GH21J029655 - 21:29657353:C:A 1.5213 Enhancer Elite Distance chr21:29655614-29658581
ZNF592NFRKBRFX1NCOR1NFICKDM4BTRIM24ZBTB33CHAMP1ZNF384BRD4RBFOX2NFRKBZNF592PHF8MGAEP400C11orf30ZNF24SKILZSCAN29KDM1AGMEB1MTA3DPF2MNTPKNOX1TAF9BPOLR2AATF4CC2D1ANBNNR2F1ZNF316HDAC2CREB3L1ARNTELF4NR2C1RESTE2F1MEIS2GABPATRIM28ARID1BPMLEP300POLR2GNFICAFF1ZEB2SMARCA4NCOA2NR2F6NR3C1IRF1NFATC3CHAMP1MYCCBX1GATAD2BATF3CBX3MTA1ESRRAMTA2JUNDCTBP1JUNBGABPB1MBD2ARID3ASMARCE1TCF12ZNF318JUNZBTB11KDM4BNCOR1HMBOX1MYBL2E2F8TAL1MAFFTRIM24BCORGATA2TBL1XR1NFE2L2CUX1MAFKEHMT2RNF2HES1ZKSCAN1IKZF1ZNF184CEBPBLEF1NFE2MAXZBTB40BRD9MITFZNF639NEUROD1STAT3STAT2HDAC1E4F1ATF7YY1HCFC1TBPFOXK2EGR1SMAD1BHLHE40FOSL1MLLT1MYNNNCOA1SMARCC2FOSARHGAP35SOX6TEAD4CREMZNF384RAD21FOXM1SMAD5CTCFBRD4SPI1SMARCE1RNF2ZNF592SMARCA4HDAC1CTBP1PKNOX1NCOR1MEIS2KDM1ATRIM24NBNBRD9IKZF1HMBOX1TEAD4LEF1ZNF318GATA4MAXFOXK2GATAD2BCUX1CHAMP1TBL1XR1TFAP4DPF2EP300NEUROD1JUNDZEB2NFE2TRIM28TBPSOX6FOXA2GATA1ZBTB40ARID1BFOXA1ZBTB8AMITFTCF7ZSCAN29C11orf30MAFKMAFFZNF316ARNTMLLT1CHAMP1ZBTB33NFRKB
GH21J029659 - 21:29660383:C:T 1.0920 Enhancer - Distance chr21:29659902-29660631
TRIM24CBX1TCF12ZNF592CBFA2T3TRIM28CC2D1AZEB2FOXM1ZNF316RFX1CBX1CHAMP1TRIM24ZNF280ATEAD4XRCC3HDAC1ZNF143IKZF1YY1CBX5CBX3EHMT2
GH21J029694 - None 0.0000 Enhancer - Distance chr21:29694567-29694689
TAL1
GH21J029772 - None 0.0000 Enhancer - Distance chr21:29772039-29772198 -
GH21J029848 - None 0.0000 Enhancer - Distance chr21:29848488-29848794 -
GH21J029849 - None 0.0000 Enhancer - Distance chr21:29849823-29849973
TRIM28CTCFL3MBTL2EHMT2CBX3ZNF24MTA3SMC3CHD1RAD21CTBP1PHF21AIRF1SKILRXRATRIM24NCOA1MLLT1TCF7L2CC2D1ATRIM22ARID2SMARCA5ARID3ABRD4TCF7ARNTRESTEP300RB1YY1HDAC1NEUROD1CHAMP1JUNZNF143SMARCA4NFE2JUNDZNF384BHLHE40DEAF1
GH21J029870 - 21:29870914:C:T 0.4955 Enhancer - C-HiC,Distance chr21:29870903-29871053
RBBP5TAF1TBPUSF1ZNF316ZBTB5
GH21J029904 - 21:29904972:T:A 1.2888 Enhancer - C-HiC,Distance chr21:29904963-29905113
KDM1AMGANR2F1L3MBTL2NFICCTCFRAD21FOS
GH21J029939 - None 0.0000 Promoter - Distance chr21:29939660-29939720
SUZ12RNF2KDM4AMXI1ASH2LZNF263SIN3AKDM5B
GH21J029941 - None 0.0000 Promoter - Distance chr21:29939985-29940045
SUZ12ASH2LSIN3AKDM5BFOXK2GATA3NRF1CBFA2T2EZH2
GH21J029940 - 21:29940116:G:A 0.0760 Promoter - Distance chr21:29940114-29940174
SUZ12ASH2LSIN3AKDM5BFOXK2GATA3NRF1CBFA2T2EZH2
GH21J030060 - 21:30060527:T:C 0.0595 Enhancer - Distance chr21:30060361-30060544 -
GH21J030072 - None 0.0000 Enhancer - Distance chr21:30072582-30072732
CTCFSMC3RAD21FOS
GH21J030083 - None 0.0000 Enhancer - Distance chr21:30083242-30083392
SIN3ARFX1POLR2AASH2LSP1
GH21J030088 - 21:30088606:G:C 0.4341 Enhancer - Distance chr21:30088250-30088632 -