GWAS Annotated: HACD1

Gene: 3-hydroxyacyl-CoA dehydratase 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
HACD1GH10J017335-None0.0000Enhancer56-C-HiCchr10:17335201-17335331ENSR10_98TQZ
JUNDCEBPBFOSZNF316MAFK
HACD1GH10J017420-10:17421129:C:T0.9371Enhancer1-C-HiCchr10:17420568-17421397-
ZNF316
HACD1GH10J017422-10:17422832:C:T0.8143Enhancer1-C-HiCchr10:17422145-17422886--
HACD1GH10J017438-None0.0000Enhancer82-C-HiCchr10:17438788-17439976-
TRIM24NR2F1IKZF1ZNF24ZNF592L3MBTL2MNTMYCE2F6MAXMGA
HACD1GH10J017443-10:17445380:T:C1.2629Enhancer380EliteeQTLschr10:17443675-17446980ENSR10_98WXJ, ENSR10_98WXX
POLR2APOLR2GSMC3NFATC3NFICZNF217ELF1RELBIKZF1MEF2ASKILMTA2ATF2CBX5IKZF2DPF2TBX21GATAD2BPKNOX1JUNBRUNX3IRF4SRFFOSL2BCL11ACREMBATFFOSZNF592BHLHE40EZH2ZNF24FOXA1SIN3AELF1SMARCE1ZNF217GATA3DPF2NR2F2GATAD2BFOSNFIBNCOA3CREB1HNF4AESRRASP1MBD2JUNDCTBP1ESR1CREMFOSRBFOX2POLR2AZBTB33
HACD1GH10J017451-10:17453922:C:A1.0460Promoter/Enhancer608EliteeQTLschr10:17451166-17455862ENSR10_564SRD, ENSR10_564SW4, ENSR10_98X3K, ST8SIA6_1
BRD9HDAC1ZNF592PMLSMAD5POLR2AIKZF1EGR1SMARCA4HDAC1E4F1SMARCE1MLLT1SOX6BRD9AFF1RNF2DPF2PKNOX1ARID1BMEIS2TAF9BEP400DACH1CBFA2T3KDM1ACHAMP1ARNTNCOR1GATAD2AESR1CEBPBATF3MNTEZH2EGR1POLR2ATAF15SIN3ATBPRNF2RBFOX2BMI1HDAC2IRF1PRPF4CHD1IKZF1XRCC5POLR2GFIP1L1HNRNPLLRESTRBM22TAF1RBBP5MLLT1MYCATF7SUZ12CBX1MAXUBTFCTCFPHF8RB1CTBP1KAT2BZNF217L3MBTL2RLFMTA3RAD21KDM4AASH2LNFRKBSMAD5ZFXCLOCKPRDM10RBM14E2F6RUNX1THAP1ZBTB7ACHD1CTCFPHF8EP300GATAD2BGATA1IKZF1ZNF217POLR2ABHLHE40TAF1YY1HDAC2SMARCE1FIP1L1SMC3RAD21CBX1UBTFGATA3SOX6SKILRNF2CTBP1SUZ12ELF1NCOR1ESRRARB1GMEB1ZBTB7AEP400HDAC1EGR1MNTSMARCC2RLFSAFBSMARCA4MAXIKZF1MLLT1ZNF24CBX5TAF9BZBTB40PHF21ASMAD5GATAD2AZEB2MYCLEF1NRF1KDM5BKLF16NBNBACH1RFX1ZNF282DPF2BCORMIER1MTA2AFF1ARNTTCF12ZNF184IRF2BRD9FOXM1NR3C1NFATC3PHB2DNMT1CUX1SMAD1ARID2ARID1BMAFKNFRKBHNRNPLE4F1EHMT2PKNOX1YY1LEF1ASH1LIRF1EP300RNF2SMAD5E2F6E2F1PRDM10MBD2SETDB1CHAMP1RBM25TBPCBX3MAXL3MBTL2ZNF592MYCCREB3L1MGAIKZF1HMBOX1
HACD1GH10J017456-10:17457233:C:T0.3305Enhancer171-C-HiCchr10:17456806-17457765-
ATF7HDAC3RNF2DPF2CHAMP1ARNTIKZF1NBNLEF1HDAC1HDAC2SMARCA4MEIS2SOX6NCOR1TRIM28NCOA1EHMT2TRIM24CBFA2T3NFATC3FOXM1ARID1BCC2D1AZEB2NR2F2KLF16IRF1STAT5ATAL1TCF12GATA1PHB2MCM7EP300CBFA2T2TEAD4ARID3ASMARCE1MTA2MYCPMLNFICZNF316
HACD1GH10J017460-10:17461247:A:G0.1997Enhancer99-C-HiCchr10:17460181-17461439-
MEIS2HDAC1GABPB1BRD9MLLT1CHAMP1IKZF1ARID2TAL1TRIM24SMARCA5MTA1LEF1SPI1ATF3FOSTRIM24
HACD1GH10J017473-10:17473153:G:A0.4892Enhancer178-C-HiCchr10:17473021-17473171-
RFX1SIN3AGABPB1HDAC1ATF7YY1NEUROD1ZBTB40HCFC1FOXK2ZSCAN29NR2C1SMARCA4IRF1E4F1MNTSAP30MITFPOLR2ARAD51EP400ETV6MAXGABPAZNF592SMAD5MTA2LEF1BMI1MXI1BHLHE40TBPEGR1KLF16SOX6EP300USF1USF2IKZF1MYBL2HDAC2ARID3AZEB2BRD9HMBOX1RCOR1PMLAFF1BACH1PRDM10
HACD1GH10J017474-10:17473910:G:C0.1506Enhancer149-eQTLs,C-HiCchr10:17473761-17473911-
ATF7SMARCA4MNTPOLR2AZNF592SOX6HDAC2ZEB2BRD9HMBOX1PRDM10TRIM24NR2F2ARID1BMYCSMARCE1ZNF282DPF2NCOA1ATF4RNF2MTA1GMEB1FOXM1NBNCHAMP1MTA3GATAD2BMGANFICCREMARID3ANFATC3TAF9BL3MBTL2PKNOX1MAXTBPBHLHE40ZBTB40
HACD1GH10J017497-None0.0000Enhancer1-C-HiCchr10:17497800-17498000-
NR3C1
HACD1GH10J017504-10:17508120:C:T1.4033Enhancer246EliteC-HiCchr10:17504387-17508274ENSR10_B5GRJ
DEAF1L3MBTL2FOSJUNDHMBOX1PKNOX1MEIS2ZNF592C11orf30ZNF316THRAL3MBTL2IKZF1E4F1GABPB1HDAC1SOX6MEIS2ELF4E2F1STAT5AIRF1NCOA2TAF9BZNF318KDM1ARNF2IKZF2KDM4BZBTB8AHDAC1GATAD2AZNF592YY1EHMT2IRF1IRF2ZNF316C11orf30MAFKMAFFCHAMP1ZBTB33
HACD1GH10J017508-10:17510548:A:C1.2167Enhancer301EliteC-HiCchr10:17508843-17513993ENSR10_98XMC, ENSR10_8HWBC, ENSR10_B5GSH, ENSR10_B5GSM
ZNF217NBNE2F8E4F1ZNF687SMARCA5ZNF316CBFA2T3HMBOX1ZEB2MTA1KDM1AZBTB2ATF3DPF2POLR2AMTA3SMARCC2MEF2BPMLTRIM28ARID1BATF7NCOR1GATA2SMARCA4HDAC2ARNTCBX3L3MBTL2MLLT1RCOR1IRF1NFICATF2GATAD2BNR2F2PHB2DACH1RNF2SKILEEDZSCAN29MTA2CC2D1ACEBPBTBX21BRD9FOXK2MYCTBL1XR1TCF12ELF1IKZF1KLF16HDAC3ZNF184LEF1MNTTAL1MAFFNRF1JUNDTRIM24CBFA2T2SMAD1NCOA1SMARCE1GATA1MCM7MEIS2EP300IKZF2NFATC3ZNF24BACH1CREMCHAMP1PKNOX1JUNNFE2FOXM1RELBTRIM22AFF1TEAD4HDAC1CREB3L1BHLHE40IRF4PTBP1RAD51PAX5ATF4MIER1STAT5AEBF1SOX6MITFEHMT2RUNX3CTBP1ARID3ASPI1BCL11APBX3RBM25GATA2KDM4BIKZF1NFICZBTB40ATF2JUNBATF7SKILGATAD2BZNF687ARNTTBX21ZNF592TRIM22CREMCBX5MTA2IKZF2EP300TCF12EBF1RUNX3SMARCA5ARID3AIRF4RELBPAX5CBFBBCL11ADPF2RAD51BATFNFATC3MLLT1EEDMEF2BBHLHE40BCORPKNOX1ZMYM3RBM25CHD1ASH2LTBL1XR1RBBP5TBPARID1BMEF2BMTA3POLR2ASTAT5ACBX5NBNNFATC1MTA2SKILSMAD1RB1ETV6IKZF1BMI1CBFBGABPARELBFOSTCF7ZBED1FOSL2TBX21E2F8ZSCAN29EP300JUNDJUNBIKZF2GATA2DPF2BACH1ZNF217ATF7IRF5BCL3POU2F2NFICFOXM1ATF3BHLHE40MEF2AARID3AEEDARNTRUNX3BATFMEF2CSRFIRF4ATF2CREMBCL11ANFATC3PAX5TCF12TRIM22RELBSP1EP300ARID1BIKZF1FOSL2JUNDSTAT3FOXA1FOSZBTB33
HACD1GH10J017578-None0.0000Enhancer186-C-HiCchr10:17578721-17578871-
ZNF24POLR2AMNTNR2F1PKNOX1NR2F2RESTNCOA1CBFA2T3ARID1BHDAC3TAL1SMARCC2NCOR1EHMT2TRIM28ZEB2NBNDPF2HDAC1SMARCA4CHAMP1TCF12TRIM24MTA1LEF1SOX6ARNTKLF16NFATC3NR2F6SMARCE1IKZF1PHB2CBFA2T2STAT5AGATA2HDAC2KDM1AEP300RNF2RCOR1MLLT1MTA2TEAD4GATA1FOXM1MEIS2HES1NFICPMLCC2D1A
HACD1GH10J017585-10:17585138:C:G1.5320Enhancer91-eQTLs,C-HiCchr10:17585000-17585200-
NBNIKZF2IKZF1MEF2BMTA2TBX21ATF7SPI1CHAMP1
HACD1GH10J017586-10:17587034:A:G1.6212Enhancer105-eQTLs,C-HiCchr10:17586800-17587400ENSR10_98ZGS
RFX1E4F1ELF1JUNDMYNNGABPB1SPI1BHLHE40
HACD1GH10J017599-None0.0000Enhancer91-Distancechr10:17599221-17599371-
RNF2CTCFTRIM22MYCYY1SMC3RAD21GATA3CREMARID3AREST
HACD1GH10J017607-10:17607759:T:C1.0280Enhancer143-eQTLs,Distancechr10:17607641-17607791ENSR10_98ZNS
CTCFKDM1AGATA3ZBTB40RAD21ARNTTBX21ZNF217TRIM22SIN3AZNF143ARID3AMYCCC2D1APKNOX1SMC3ZNF384SMARCA5CEBPBARID2BHLHE40ZNF24REST
HACD1GH10J017616-10:17616892:A:C1.6747Promoter/Enhancer552EliteDistancechr10:17616200-17618360ENSR10_98ZRN, ENSR10_565TRZ, HACD1_1
ZBTB33EP400ARNTDPF2ATF3KDM1ASMARCE1NCOR1CHAMP1RNF2ZNF639TRIM24ZEB2GATA1SMARCA4TRIM28SOX6SP1ESRRAASH2LC11orf30CBX3FOXA1MEIS2EP300NBNCEBPBTBL1XR1FOXA2UBTFTCF12MAFFBCORMYNNRCOR1MAFKCREMTAL1PKNOX1NFE2L2CBFA2T2HDAC2MAXKLF16ZNF384NFE2NR2F2HES1HDAC1BHLHE40ZNF316JUNDCBFA2T3PHF21ACTBP1HNF4ATEAD4GATA2ARID1BRBM39RBBP5RXRAPOLR2ACTCFRBM22RBFOX2RFX5TBPXRCC5HNRNPLSIN3AAGO2HNRNPKTAF15SMC3HNRNPLLMYCEP300NR3C1SRFNANOGCEBPBJUNDHDAC6PTBP1IKZF1U2AF1ELF1GATAD2BDPF2FIP1L1POLR2AAGO1PHF8CTCFHDAC1POLR2GSAP30EGR1KDM4AFUSYY1AGO2L3MBTL2ETS1TAF1MNTMYCGATA3BACH1ZBTB7AMXI1HNRNPLLMAXUSF1EZH2SP1GMEB1HNRNPLBHLHE40UBTFEP300E2F6SOX13ZNF143ETV4NRF1SMC3RAD21SKITRIM28HNRNPLLZBTB33PKNOX1CREB1FOSZNF24SOX13ZNF384FOXA2
HACD1GH10J017642-10:17647578:T:G1.8673Promoter/Enhancer700EliteC-HiCchr10:17642361-17651947ENSR10_B5HJK, ENSR10_9924B, ENSR10_B5HJQ, ENSR10_B5HJX, ENSR10_8J28N, ENSR10_99263, ENSR10_8J2BR, STAM_1, STAM_2
POLR2AMLLT1BCORNR2F1SOX6NCOA1MGAGATA1SAP30RAD21SIN3AATF3IKZF2YY1CEBPBHDAC1ASH2LRBBP5FOSE2F1IKZF1POLR2AMEIS2RBFOX2KDM5AMNTMYCUBTFMAXHDAC2POLR2GPHF8SMAD1MTA2PAX5EP400NR2F1CHD1SKIATF4NFIBNR2C1DNMT1MLLT1TRIM24ATF2NCOR1GATA3NCOA1ZEB2TAF7MXI1BRD9ATF7EP300NFICSMAD5RESTPMLJUNDL3MBTL2RCOR1AFF1SP1RXRADPF2CREB3L1ARHGAP35STAT5ANFATC1TAF9BTAF1ZNF592SREBF2TBPMTA3CUX1TCF12NCOA3ZZZ3XRCC5NR3C1GATAD2BSMC3GABPB1ZBTB33CTCFZSCAN29JUNPKNOX1NFATC3ETV4NFRKBELF4KDM5BELF1ARNTRELBTBX21NBNCREMTAL1RBM39SKILPBX3TRIM22HNF4AE4F1SREBF1TRIM28ZNF143TBL1XR1IRF5MAFKMTA1MAFFCBFBC11orf30NCOA2ZNF217HCFC1RB1CLOCKEZH2NEUROD1TCF7L2SIN3BNRF1EGR1CREB1SIX5CC2D1ASTAT1KLF5BCL11AZNF207FOXM1SUZ12KDM1ANFE2ARID3AHDAC6ETS1RAD21KDM4BHSF1MYBIRF1IRF2ZNF687DACH1FOXK2IRF3RFX5CBX3TFAP4BHLHE40E2F4ZBTB7ANFYBZBTB5HNRNPLLE2F1BACH1PBX3RUNX3PHF20E2F6PHF8ZFXSMAD5ZNF263SMARCE1ZKSCAN1KDM5BMEF2BZFP91EBF1CTBP1ZNF24CHD1CBX1SMARCA5RCOR1SMARCA4SPI1KDM5AIKZF1UBTFARID2TFAP4RAD21ZNF316MAFKMAFFC11orf30ATF4ZSCAN29ATF2RBFOX2POLR2ARNF2ELF1HMBOX1BRD9MLLT1TBX21SMARCC2ARID1BSMARCA4DPF2BACH1JUNBZEB2ELF4SMARCE1ETV4JUNDFOSSTAT3TCF7FOXA1EP300NFE2FOXA2BATFFOSL2CTCFTBPNFATC3CC2D1AASH1LCHAMP1NFYBRBM25POLR2ANFYAIKZF1DPF2IKZF2ARNTMEF2BBHLHE40CREMELF1MLLT1MTA2SRFTBX21ATF7TCF12ZMYM3RCOR1PKNOX1FOSJUNDMEIS2MAFKCHD4ASH2LRBFOX2CHAMP1ZBTB33SP1KDM5ACREMTBX3HDAC2FOXA2EP300HNF4GRXRAZNF384FOXA1HNF4ATCF7RFX1MAFK
HACD1GH10J017654-10:17657196:T:A1.3077Enhancer421EliteC-HiCchr10:17654957-17657506ENSR10_B5HLC
ZNF316SPI1ZNF24MTA3ZNF207NBNIKZF1IKZF2SMARCB1NFATC1GMEB1RFX1ZBED1TBX21DPF2MEF2BFOXK2HMBOX1ARID3APMLELF1YY1ZNF217ATF7EEDFOXA2CHAMP1CTBP1SKILATF2GATA1SIX5CREMSMARCA5SMARCA4TCF12ATF3EP300GATAD2BFOXA1GATA2PAX5SMARCE1HDAC2ARID1BEHMT2TRIM28TAL1HDAC3JUNTEAD4ZNF318MTA2NCOR1JUNBSMARCC2HDAC1GATA3BCL11AFOXM1RNF2FOSNFICJUNDZBTB2AFF1ETV6CBFA2T3GATAD2AFOSL2FOSL1BATFRUNX3LEF1ZEB2CUX1EP400KLF16NFATC3SOX6MTA1E4F1BCORIRF4ZBTB40RESTTFAP4CBFA2T2TRIM24ZNF184L3MBTL2NCOA1KDM1AMLLT1ASH1LATF4ZNF282NR2F1SMARCA5MITFJUNDPRDM10MNTKDM1ANFICNRF1TCF7EGR1DPF2L3MBTL2CTBP1SMARCA4C11orf30ZEB2ZNF282MEIS2MAFKMAFFARID1BZNF316FOSNFE2IKZF1
HACD1GH10J017671-10:17671585:G:A1.0311Enhancer154-C-HiCchr10:17671461-17671611ENSR10_992D9
KDM1ACREMEP300SIN3AHMBOX1NANOGTCF12BCL11ATCF7USF1CEBPB
HACD1GH10J017672-10:17674014:G:GC0.3777Enhancer328EliteC-HiCchr10:17672449-17674841ENSR10_C3QCH
ZNF592IKZF1ZNF579POLR2AASH2LZNF217GATA1GATA3CHD7RBM22HMBOX1DPF2CTBP1MITFUSF1TBX3ATF3SIN3ACREMTCF12KDM1ATCF7L2ARID1BARID3AFOXA1HDAC2SP1SMARCA4NANOGTEAD4HNF4GTCF7PKNOX1ETS1SMARCC2NRF1C11orf30JUNDFOXA2EP300RCOR1FOSBACH1BCL11AJUNMAFKRAD21FOSL2CEBPBNFE2FOSL1
HACD1GH10J017703-10:17703997:G:A0.6573Enhancer1-C-HiCchr10:17703618-17704270--
HACD1GH10J017712-10:17713189:C:T0.7755Enhancer128EliteC-HiCchr10:17712993-17713413-
ZFXZEB1SMARCA4CTCFMLLT1SRFZMIZ1
HACD1GH10J017735-10:17735129:C:T0.8611Enhancer36-C-HiCchr10:17735108-17735734ENSR10_8J45J
GATA1EP300GATA2NR2F2POLR2A
HACD1GH10J018215-10:18215106:T:TTC0.0112Enhancer111-C-HiCchr10:18215071-18215241ENSR10_9987K, ENSR10_569NBF
CTCFSMC3RAD21ZNF207TRIM22RESTRFX5ZNF143
HACD1GH10J018216-10:18216725:T:A1.4326Enhancer82-C-HiCchr10:18216631-18216741ENSR10_8JGG3, ENSR10_569NKJ
CTCFMXI1SMC3RAD21FOS
HACD1GH10J018239-10:18240631:T:C1.4784Enhancer1-C-HiCchr10:18239945-18241279-
CTCFEP300EP300
HACD1GH10J018245-None0.0000Enhancer14-C-HiCchr10:18245088-18245099--