GWAS Annotated: LPA

Gene: lipoprotein(a)

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
LPAGH06J160278-6:160279293:G:T0.5759Enhancer9-eRNA_co-expressionchr6:160278913-160279302-
NR3C1
LPAGH06J160519-6:160520221:G:A0.1606Enhancer301EliteDistancechr6:160519400-160521238ENSR6_B36T5D, ENSR6_53DQF2B, ENSR6_94CP8W, ENSR6_53DQF4N, ENSR6_53DQF58
CTCFSUZ12ASH2LU2AF1MAXARNTZEB2ZNF263XRCC5NCOA1IKZF1RAD21SMC3RNF2RBM39ATF7POLR2AE2F8CTBP1MYCSKILYY1TBX3MXI1ZNF143KDM1ASOX6TRIM22MYNNEGR1RXRARBFOX2ESRRAETV4EEDHNF4AIKZF2HDAC2KLF16CC2D1ASAFBZNF24EP300TCF7RB1TBL1XR1FOXA2RUNX1ARID1BZNF444POLR2GIRF2GMEB1ARID2ZHX2SMARCA4LCORLRESTSIN3AZMIZ1PTBP1BRD9ELF4NFRKBRAD51E4F1HDAC1ZSCAN29MNTZNF579BACH1L3MBTL2PHF20MLLT1MGAPHF8ZBTB7AGABPB1ELF1TBPMTA1EP400CREMKDM4AE2F1PHF21AHCFC1HNRNPKRBBP5ATF3SRFE2F6ZFXTAF1NRF1FUSUBTFFIP1L1SAFBRESTHNRNPLLE2F6GABPABACH1RB1ZBTB40E2F8MLLT1HDAC1HNF4A
LPAGH06J160534-6:160534094:A:T0.5274Enhancer226EliteDistancechr6:160534000-160534458ENSR6_B36T7G, ENSR6_53DQHG7, ENSR6_53DQHGP
CTCFTRIM28TBPSMC3IKZF1RAD21SKILXRCC5CC2D1ATRIM22ZNF143STAT3MAFFZNF24YY1FOXA2SIN3BARID3ARESTRUNX3SREBF1
LPAGH06J160664-6:160664235:C:T0.3266Promoter175-Distancechr6:160664216-160664276LPA_1
YY1FOXA2HNF4AFOXA1SP1RXRA
LPAGH06J160761-None0.0000Enhancer41-eRNA_co-expressionchr6:160761975-160762303--