GWAS Annotated: MYT1L

Gene: myelin transcription factor 1 like

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
MYT1LGH02J001789-None0.0000Enhancer125EliteDistancechr2:1789125-1789662-
MAFKCTCF
MYT1LGH02J001790-2:1793486:T:C1.3706Enhancer396EliteDistancechr2:1790526-1795189ENSR2_9P7B
EZH2CBX2MAFKMAFFEP300TBPCEBPBGATA3CUX1MAFKMNTMYCZNF263BHLHE40USF2POLR2ACTCFATF2EP300CREB1
MYT1LGH02J001795-2:1796010:T:C1.4092Enhancer192EliteDistancechr2:1795868-1796018ENSR2_BCLT
TCF7L2MAFKESRRATBPMYCFOSMAFFRAD51USF1MNT
MYT1LGH02J001796-2:1797065:T:C0.7875Enhancer140-Distancechr2:1796038-1797231ENSR2_BCLT
ESRRATBPMYCFOSRAD51USF1MNTZNF263
MYT1LGH02J001798-2:1799285:T:C1.9305Enhancer1-Distancechr2:1798216-1799891--
MYT1LGH02J001799-2:1801976:C:T1.8267Enhancer82-Distancechr2:1799953-1804239-
ATF2MAFKMAFFGATA3RFX1
MYT1LGH02J001804-2:1804722:T:C1.8850Enhancer1-Distancechr2:1804297-1805684-
CTCFEP300
MYT1LGH02J001805-2:1806504:A:G1.2869Enhancer1-Distancechr2:1805812-1807306--
MYT1LGH02J001808-2:1808152:C:T0.9404Enhancer1-Distancechr2:1808111-1808823--
MYT1LGH02J001809-2:1809892:T:C0.6521Enhancer22-Distancechr2:1809759-1809917--
MYT1LGH02J001814-2:1814137:C:T0.7383Enhancer1-Distancechr2:1814081-1815554--
MYT1LGH02J001816-2:1816288:T:C0.9831Enhancer292EliteDistancechr2:1816003-1818419ENSR2_C6TG, ENSR2_5FJN8
EP300HNRNPLLCTCFPOLR2AZFXPKNOX1EZH2ATF3EP300STAT3JUNDRBM39CEBPBFOSSP1RAD21TAF15ZNF143SMC3ZNF444TRIM22ZNF217RESTZNF574KLF16TAF7BHLHE40SMARCA4YY1GABPAEGR1KDM1ASRFTCF12BACH1XRCC5SIN3ACREB1
MYT1LGH02J001822-2:1822710:T:C0.4983Enhancer36-Distancechr2:1822219-1823097-
CTCF
MYT1LGH02J001823-None0.0000Enhancer118EliteDistancechr2:1823368-1823518ENSR2_BCQR, ENSR2_5FKN4
CTCFZNF143RAD21
MYT1LGH02J001825-2:1827594:G:A0.5369Enhancer56-eQTLs,Distancechr2:1825636-1828831-
POLR2ASMARCA4EZH2
MYT1LGH02J001828-2:1829096:T:C0.1200Enhancer1-eQTLs,Distancechr2:1828885-1829377--
MYT1LGH02J001829-2:1829896:C:T0.7227Enhancer56-eQTLs,Distancechr2:1829646-1832915--
MYT1LGH02J001835-2:1836481:C:A0.4334Enhancer56-eQTLs,Distancechr2:1835481-1837882ENSR2_83GCH, ENSR2_83GD6
TCF12USF1BHLHE40
MYT1LGH02J001854-2:1854831:A:G0.4837Enhancer99-eRNA_co-expression,Distancechr2:1854722-1854872ENSR2_83GQD
CTCFKDM4ARAD21SIN3ARFX5SMC3EGR1RCOR1ZNF143YY1SMARCA4JUND
MYT1LGH02J001886-None0.0000Enhancer118-Distancechr2:1886965-1887165-
CTCFEZH2RNF2USF1
MYT1LGH02J001923-None0.0000Enhancer36-Distancechr2:1923128-1924204-
POLR2A
MYT1LGH02J001931-None0.0000Enhancer11-eRNA_co-expression,Distancechr2:1931652-1931825-
ZFX
MYT1LGH02J001974-2:1974553:T:G0.0393Enhancer156-Distancechr2:1974508-1974678ENSR2_9R6C
TRIM28MNTCREB1FOSEP300GATA3MYCSTAT3RFX1
MYT1LGH02J001986-2:1986794:A:G0.5289Enhancer36-Distancechr2:1986787-1986918-
NANOGHDAC2
MYT1LGH02J001987-2:1991175:T:C0.6930Enhancer91-Distancechr2:1987010-1992798ENSR2_9RC3
CTCFPOLR2AMAFKMAFFFOXA1CTCFMXI1CTCFUSF1RCOR1YY1RESTMYC
MYT1LGH02J001993-2:1993872:C:T0.1470Enhancer1-Distancechr2:1993748-1993898ENSR2_9RCX
STAT3FOSMYC
MYT1LGH02J001997-None0.0000Enhancer36-Distancechr2:1996048-1996198ENSR2_9RDK
RUNX3SPI1
MYT1LGH02J001996-None0.0000Enhancer149-Distancechr2:1996952-1998408-
EZH2SP1HNF4AFOXA2GABPAZBTB33YY1JUNDNR2F2RESTRXRAMAXATF3FOXA1POLR2ATFAP4HNF4GEGR1CTCFEP300RAD21TAF1NR3C1
MYT1LGH02J002006-2:2008688:T:C0.8223Enhancer153EliteeQTLs,Distancechr2:2006535-2009024-
SMARCA4USF1KDM4ATAF7RFX5FOSTAF1HDAC2SP1NANOGYY1
MYT1LGH02J002009-2:2011032:T:G0.5387Enhancer1-Distancechr2:2009822-2011368--
MYT1LGH02J002014-None0.0000Enhancer118EliteDistancechr2:2014140-2014646ENSR2_BDRG
MXI1POLR2AEP300RCOR1GATA2FOSRAD21
MYT1LGH02J002023-2:2023521:C:A0.5182Enhancer68EliteeQTLs,Distancechr2:2023415-2023606--
MYT1LGH02J002024-2:2026967:A:G0.5787Enhancer82-eQTLs,Distancechr2:2024279-2027113-
HNRNPLHNRNPLLHNF4AHNF4G
MYT1LGH02J002057-None0.0000Enhancer143-Distancechr2:2057228-2057338ENSR2_BF2M
POLR2ANRF1E4F1GABPB1MEIS2IRF1SP1ELF4EHMT2TRIP13EGR1STAT3ZBTB40PKNOX1EP300FOS
MYT1LGH02J002083-None0.0000Enhancer126-Distancechr2:2083528-2083658-
NRF1PKNOX1MNTZNF217CUX1MBD2GATA3NEUROD1SMARCE1DPF2SIX4ELF1CTBP1
MYT1LGH02J002101-None0.0000Enhancer66-eRNA_co-expression,Distancechr2:2101426-2101621-
IKZF1
MYT1LGH02J002112-None0.0000Enhancer71-Distancechr2:2112528-2112638-
MXI1GATA2GATA3RAD21USF1RCOR1USF2RFX5
MYT1LGH02J002120-2:2120934:G:A0.6031Enhancer130-eQTLs,Distancechr2:2120848-2121200ENSR2_BFCT, ENSR2_5HGNC
CTCFHNRNPLLRAD21GABPAXRCC5HNF4AZBTB7AMAXYY1TRIM22RESTRB1ELF1SMC3ZNF143SMARCA4GABPB1
MYT1LGH02J002270-2:2272775:G:A1.0477Enhancer144EliteC-HiC,Distancechr2:2270600-2272909ENSR2_9WCB
GATA2NR2F2SMARCA4RAD21CTCFSPI1JUNDPOLR2A
MYT1LGH02J002324-None0.0000Promoter/Enhancer225EliteDistancechr2:2324950-2325010MYT1L_2
MXI1SMC3RAD21CHD7RFX5YY1MAFKREST
MYT1LGH02J002332-None0.0000Promoter/Enhancer211EliteDistancechr2:2331264-2331324MYT1L_1
MXI1RAD21YY1GATA2
MYT1LGH02J002331-None0.0000Enhancer277EliteDistancechr2:2331424-2332463ENSR2_75NZ2, ENSR2_83SZL
MXI1YY1GATA2EP300GATA3RFX1TAL1RFX5RAD21CTCFSMC3RCOR1MAFKJUNDMXI1YY1SMARCA4RESTMYC
MYT1LGH02J002464-2:2464378:G:A0.1491Enhancer66-Distancechr2:2464236-2464487ENSR2_9ZF3
RFX5CREB1POLR2A