GWAS Annotated Elements: MYT1L

Gene: myelin transcription factor 1 like

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH02J001789 - None 0.0000 Enhancer Elite Distance chr2:1789125-1789662
MAFKCTCF
GH02J001790 - 2:1793486:T:C 1.3706 Enhancer Elite Distance chr2:1790526-1795189
EZH2CBX2MAFKMAFFEP300TBPCEBPBGATA3CUX1MAFKMNTMYCZNF263BHLHE40USF2POLR2ACTCFATF2EP300CREB1
GH02J001795 - 2:1796010:T:C 1.4092 Enhancer Elite Distance chr2:1795868-1796018
TCF7L2MAFKESRRATBPMYCFOSMAFFRAD51USF1MNT
GH02J001796 - 2:1797065:T:C 0.7875 Enhancer - Distance chr2:1796038-1797231
ESRRATBPMYCFOSRAD51USF1MNTZNF263
GH02J001798 - 2:1799285:T:C 1.9305 Enhancer - Distance chr2:1798216-1799891 -
GH02J001799 - 2:1801976:C:T 1.8267 Enhancer - Distance chr2:1799953-1804239
ATF2MAFKMAFFGATA3RFX1
GH02J001804 - 2:1804722:T:C 1.8850 Enhancer - Distance chr2:1804297-1805684
CTCFEP300
GH02J001805 - 2:1806504:A:G 1.2869 Enhancer - Distance chr2:1805812-1807306 -
GH02J001808 - 2:1808152:C:T 0.9404 Enhancer - Distance chr2:1808111-1808823 -
GH02J001809 - 2:1809892:T:C 0.6521 Enhancer - Distance chr2:1809759-1809917 -
GH02J001814 - 2:1814137:C:T 0.7383 Enhancer - Distance chr2:1814081-1815554 -
GH02J001816 - 2:1816288:T:C 0.9831 Enhancer Elite Distance chr2:1816003-1818419
EP300HNRNPLLCTCFPOLR2AZFXPKNOX1EZH2ATF3EP300STAT3JUNDRBM39CEBPBFOSSP1RAD21TAF15ZNF143SMC3ZNF444TRIM22ZNF217RESTZNF574KLF16TAF7BHLHE40SMARCA4YY1GABPAEGR1KDM1ASRFTCF12BACH1XRCC5SIN3ACREB1
GH02J001822 - 2:1822710:T:C 0.4983 Enhancer - Distance chr2:1822219-1823097
CTCF
GH02J001823 - None 0.0000 Enhancer Elite Distance chr2:1823368-1823518
CTCFZNF143RAD21
GH02J001825 - 2:1827594:G:A 0.5369 Enhancer - eQTLs,Distance chr2:1825636-1828831
POLR2ASMARCA4EZH2
GH02J001828 - 2:1829096:T:C 0.1200 Enhancer - eQTLs,Distance chr2:1828885-1829377 -
GH02J001829 - 2:1829896:C:T 0.7227 Enhancer - eQTLs,Distance chr2:1829646-1832915 -
GH02J001835 - 2:1836481:C:A 0.4334 Enhancer - eQTLs,Distance chr2:1835481-1837882
TCF12USF1BHLHE40
GH02J001854 - 2:1854831:A:G 0.4837 Enhancer - eRNA_co-expression,Distance chr2:1854722-1854872
CTCFKDM4ARAD21SIN3ARFX5SMC3EGR1RCOR1ZNF143YY1SMARCA4JUND
GH02J001886 - None 0.0000 Enhancer - Distance chr2:1886965-1887165
CTCFEZH2RNF2USF1
GH02J001923 - None 0.0000 Enhancer - Distance chr2:1923128-1924204
POLR2A
GH02J001931 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr2:1931652-1931825
ZFX
GH02J001974 - 2:1974553:T:G 0.0393 Enhancer - Distance chr2:1974508-1974678
TRIM28MNTCREB1FOSEP300GATA3MYCSTAT3RFX1
GH02J001986 - 2:1986794:A:G 0.5289 Enhancer - Distance chr2:1986787-1986918
NANOGHDAC2
GH02J001987 - 2:1991175:T:C 0.6930 Enhancer - Distance chr2:1987010-1992798
CTCFPOLR2AMAFKMAFFFOXA1CTCFMXI1CTCFUSF1RCOR1YY1RESTMYC
GH02J001993 - 2:1993872:C:T 0.1470 Enhancer - Distance chr2:1993748-1993898
STAT3FOSMYC
GH02J001997 - None 0.0000 Enhancer - Distance chr2:1996048-1996198
RUNX3SPI1
GH02J001996 - None 0.0000 Enhancer - Distance chr2:1996952-1998408
EZH2SP1HNF4AFOXA2GABPAZBTB33YY1JUNDNR2F2RESTRXRAMAXATF3FOXA1POLR2ATFAP4HNF4GEGR1CTCFEP300RAD21TAF1NR3C1
GH02J002006 - 2:2008688:T:C 0.8223 Enhancer Elite eQTLs,Distance chr2:2006535-2009024
SMARCA4USF1KDM4ATAF7RFX5FOSTAF1HDAC2SP1NANOGYY1
GH02J002009 - 2:2011032:T:G 0.5387 Enhancer - Distance chr2:2009822-2011368 -
GH02J002014 - None 0.0000 Enhancer Elite Distance chr2:2014140-2014646
MXI1POLR2AEP300RCOR1GATA2FOSRAD21
GH02J002023 - 2:2023521:C:A 0.5182 Enhancer Elite eQTLs,Distance chr2:2023415-2023606 -
GH02J002024 - 2:2026967:A:G 0.5787 Enhancer - eQTLs,Distance chr2:2024279-2027113
HNRNPLHNRNPLLHNF4AHNF4G
GH02J002057 - None 0.0000 Enhancer - Distance chr2:2057228-2057338
POLR2ANRF1E4F1GABPB1MEIS2IRF1SP1ELF4EHMT2TRIP13EGR1STAT3ZBTB40PKNOX1EP300FOS
GH02J002083 - None 0.0000 Enhancer - Distance chr2:2083528-2083658
NRF1PKNOX1MNTZNF217CUX1MBD2GATA3NEUROD1SMARCE1DPF2SIX4ELF1CTBP1
GH02J002101 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr2:2101426-2101621
IKZF1
GH02J002112 - None 0.0000 Enhancer - Distance chr2:2112528-2112638
MXI1GATA2GATA3RAD21USF1RCOR1USF2RFX5
GH02J002120 - 2:2120934:G:A 0.6031 Enhancer - eQTLs,Distance chr2:2120848-2121200
CTCFHNRNPLLRAD21GABPAXRCC5HNF4AZBTB7AMAXYY1TRIM22RESTRB1ELF1SMC3ZNF143SMARCA4GABPB1
GH02J002270 - 2:2272775:G:A 1.0477 Enhancer Elite C-HiC,Distance chr2:2270600-2272909
GATA2NR2F2SMARCA4RAD21CTCFSPI1JUNDPOLR2A
GH02J002324 - None 0.0000 Promoter/Enhancer Elite Distance chr2:2324950-2325010
MXI1SMC3RAD21CHD7RFX5YY1MAFKREST
GH02J002332 - None 0.0000 Promoter/Enhancer Elite Distance chr2:2331264-2331324
MXI1RAD21YY1GATA2
GH02J002331 - None 0.0000 Enhancer Elite Distance chr2:2331424-2332463
MXI1YY1GATA2EP300GATA3RFX1TAL1RFX5RAD21CTCFSMC3RCOR1MAFKJUNDMXI1YY1SMARCA4RESTMYC
GH02J002464 - 2:2464378:G:A 0.1491 Enhancer - Distance chr2:2464236-2464487
RFX5CREB1POLR2A