GWAS Annotated: NCKAP5

Gene: NCK associated protein 5

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
NCKAP5GH02J132670-2:132670801:T:C0.2307Promoter/Enhancer521Elite-chr2:132669827-132672115ENSR2_5367JLQ, ENSR2_93XMRF, ENSR2_5367JR3, ENSR2_5367JSP, ENSR2_93XMRR, LYPD1_1, LYPD1_3, LYPD1_2
CTCFEZH2SUZ12RAD21SMC3RNF2HDAC2PHF8KDM4ANFIBRFX1ZFXSIN3ACHD1ZNF263TBPPOLR2AUSF2USF1BHLHE40ATF3RAD51NFIBSIN3ABHLHE40MNTCTCFRAD21TRIM28KDM4ARBBP5ASH2LMXI1EZH2SMC3TCF12JUNDFOXA1GATA2FOSL2FOSMYCRAD21STAT3USF2BHLHE40
NCKAP5GH02J132676-None0.0000Enhancer6-Distancechr2:132676141-132676313--
NCKAP5GH02J132690-2:132690725:G:C0.1190Enhancer123EliteDistancechr2:132690561-132692081-
PRDM10MAFKCEBPBCREB1BHLHE40PKNOX1
NCKAP5GH02J132803-2:132803778:A:G0.3112Enhancer118EliteDistancechr2:132803667-132805021ENSR2_93XP86
FOXA1FOSRESTBHLHE40SPI1EP300
NCKAP5GH02J132815-2:132815533:C:T0.4261Enhancer126-Distancechr2:132815204-132816630ENSR2_93XPCG
CREB1MYCCEBPBSTAT3BHLHE40FOSFOXA1MAFKBACH1FOSZNF263STAT3YY1
NCKAP5GH02J132836-2:132836261:C:T0.3712Enhancer6-Distancechr2:132836043-132836373--
NCKAP5GH02J132882-None0.0000Enhancer11-Distancechr2:132882798-132883182--
NCKAP5GH02J133045-None0.0000Enhancer46-Distancechr2:133045972-133046150-
MNT
NCKAP5GH02J133077-None0.0000Enhancer1-Distancechr2:133077487-133077637ENSR2_93XS68
EP300CEBPB
NCKAP5GH02J133156-None0.0000Enhancer22-eRNA_co-expression,Distancechr2:133156922-133157050--
NCKAP5GH02J133200-2:133201016:T:C0.1741Enhancer213EliteDistancechr2:133200205-133201900ENSR2_93XTH2
HNF4AMAFKSIN3AGATA3HNF4AGABPASP1JUNDATF3ETS1FOSCREB1DPF2FOXA1NR3C1FOSL2GATA2BHLHE40NFE2L2CEBPB
NCKAP5GH02J133212-2:133212935:A:C0.1026Enhancer1-Distancechr2:133212628-133213742-
FOXA1GATA2FOS
NCKAP5GH02J133240-2:133241034:C:T0.8269Enhancer63EliteDistancechr2:133240069-133242095ENSR2_BZFXR
BHLHE40USF2NFE2L2
NCKAP5GH02J133264-None0.0000Enhancer1-Distancechr2:133264128-133264278--
NCKAP5GH02J133265-2:133265747:G:A0.8366Promoter/Enhancer354EliteDistancechr2:133265310-133267401ENSR2_93XW6Q, ENSR2_93XW6W, ENSR2_536CBTJ, ENSR2_BZG4J
MAFKSPI1TBPBACH1MAFFRFX1MNTZNF263EZH2SP1BMI1KDM4AMYCZNF217RXRAESR1GATAD2BPOLR2AMNTCTCFRNF2HDAC2PHF8POLR2AKDM1ASP1NR3C1RAD21ASH2LRXRASIN3AJUNDESRRARBBP5SMC3MXI1TAF1ZNF263MTA1MYCMNTHNRNPKTBP
NCKAP5GH02J133285-2:133287272:C:T1.3615Enhancer208EliteDistancechr2:133285575-133289089ENSR2_BZG7C, ENSR2_536CGCG, ENSR2_93XWF5
CTCFATF4DPF2ATF7ZNF217MAFFCEBPBRCOR1FOSCEBPBBHLHE40RAD21ATF2CREB1
NCKAP5GH02J133293-2:133294291:G:A0.0302Enhancer192EliteDistancechr2:133293329-133295227ENSR2_93XWGT
RESTFOSBHLHE40USF2SMARCA4
NCKAP5GH02J133302-2:133303003:T:C0.4162Enhancer161EliteDistancechr2:133302846-133303898ENSR2_93XWKK
MAFKFOXA2MAFKFOSNFE2L2FOXA1C11orf30MAFFZNF316
NCKAP5GH02J133316-2:133318212:A:C0.9930Enhancer71-Distancechr2:133316054-133318264-
GATA3
NCKAP5GH02J133323-2:133326409:A:G1.5289Enhancer299EliteDistancechr2:133323531-133328645ENSR2_BZGDS, ENSR2_BZGF7
SP1TBPFOXA1FOSL2FOSMAFKMAFFNFE2L2RESTFOXA1CTCFTAF1ATF3GABPAATF7FOSCREB1JUNDNFE2L2BHLHE40RCOR1TBPMAFKMAFFFOXA1FOSL2NR3C1SP1STAT3TCF12POLR2ARAD21CEBPB
NCKAP5GH02J133338-None0.0000Enhancer1-Distancechr2:133338308-133338438-
FOS
NCKAP5GH02J133341-None0.0000Enhancer6-Distancechr2:133341157-133341301--
NCKAP5GH02J133346-None0.0000Enhancer105-Distancechr2:133346313-133347184ENSR2_93XX36
STAT3FOSMAFKNR3C1CEBPB
NCKAP5GH02J133352-None0.0000Enhancer1-Distancechr2:133352928-133353078ENSR2_93XX4W-
NCKAP5GH02J133361-2:133361902:A:G1.0640Enhancer240EliteDistancechr2:133361700-133362978ENSR2_BZGLB
POLR2ATRIM28TBX21ATF7IKZF1IKZF2ATF2GATA3CEBPBTBPJUNDMEF2BEP300EBF1MAFKSMARCA4MAFFFOS
NCKAP5GH02J133376-None0.0000Enhancer56-Distancechr2:133376535-133377714ENSR2_BZGNG
MAFKMAFFFOS
NCKAP5GH02J133378-2:133379586:C:G0.6611Enhancer71-Distancechr2:133378404-133379759ENSR2_93XXDK
FOSMAFK
NCKAP5GH02J133389-2:133390322:C:T0.4065Enhancer1-Distancechr2:133389371-133390756ENSR2_93XXHQ-
NCKAP5GH02J133420-2:133420784:G:T1.1060Enhancer222EliteDistancechr2:133420697-133422255ENSR2_BZGWX
RAD51CTCFMAFKGATA3TRIM28SMC3SMARCA5POLR2ARAD21IKZF2IKZF1CTBP1FOXA2CREB1GATAD2BEP300SP1NCOA3PKNOX1ATF7SIN3AHNF4ATBX21TBPATF2HNF1AJUNDMXI1BHLHE40PBX3ATF3CEBPBFOXA1ZNF24RXRANR3C1
NCKAP5GH02J133430-2:133431435:C:T0.4041Enhancer99-Distancechr2:133430827-133432019ENSR2_93XXXL
ELF1RFX1GATA3FOSL2SP1FOS
NCKAP5GH02J133433-2:133435235:G:T0.4261Enhancer274EliteeRNA_co-expression,Distancechr2:133433291-133436059ENSR2_BZGZT
RCOR1GATA3FOXA1HDAC2CLOCKGATA3CEBPBSIN3ATRIM28ATF3CTCFZNF217SP1ZNF263SMARCE1ATF7TCF12TBPZNF687FOSZNF592FOSL2MAFKZHX2CREB1CTBP1TAF1PKNOX1NFIBNFE2L2NR3C1RAD21CEBPB
NCKAP5GH02J133452-2:133452469:T:C0.9109Enhancer1-Distancechr2:133452220-133453350-
EP300
NCKAP5GH02J133459-2:133459811:T:C0.1958Enhancer36-Distancechr2:133459749-133459899--
NCKAP5GH02J133475-2:133475344:A:T0.4696Enhancer1-Distancechr2:133475287-133476070--
NCKAP5GH02J133476-2:133477625:G:A1.5826Enhancer82-Distancechr2:133476864-133478347ENSR2_85WXW4
C11orf30MAFFMAFKCREB1FOS
NCKAP5GH02J133483-2:133483447:A:T0.4990Enhancer36-Distancechr2:133483329-133483479ENSR2_93XZHM
GATA3
NCKAP5GH02J133484-2:133484072:G:C0.9832Enhancer1-Distancechr2:133483747-133484725ENSR2_93XZHX
CTCFEP300RAD21SMC3
NCKAP5GH02J133492-2:133492522:G:A1.2497Enhancer208EliteeQTLs,C-HiC,Distancechr2:133492516-133493489-
CLOCKZNF507MNTMYCFOSZNF687JUNDRAD51SP1DPF2MBD2CTBP1GATA3GATAD2BNEUROD1NCOA3ATF7ESRRAZNF217ESR1HNF4AZNF24SMARCE1FOXA1PKNOX1
NCKAP5GH02J133497-2:133499606:T:C0.9158Enhancer210EliteeQTLs,Distancechr2:133497335-133499695ENSR2_BZHBT, ENSR2_93XZN9
RESTRESTSPI1MAXGATAD2BNFATC3DPF2MEF2BBMI1ELF1TBX21MYBARID3AEP300PKNOX1MTA2RELBMXI1BHLHE40ZNF687ARNTIKZF1IKZF2SKILTCF12ZNF384BATFEBF1BCL11AZNF143CTCFNBNATF7ZNF217
NCKAP5GH02J133502-2:133502888:G:A0.4713Enhancer220EliteDistancechr2:133502853-133503887-
ZNF24ELF1NBNSKILIKZF1RAD51IKZF2ARID3AZNF592RELBMTA2ATF7MLLT1NFATC3ATF3ZNF687ZBTB33MAXMXI1TBX21HNF4AFOXK2ZNF143RESTRAD21JUNDFOXA1MEF2BHNF4GFOXA2SP1YY1RXRAPKNOX1
NCKAP5GH02J133504-2:133504913:C:T0.7133Enhancer277EliteeQTLs,Distancechr2:133504399-133505839ENSR2_CH8NG
SP1GATA3ESR1NR2F2NR3C1NFIBGATA3ZNF592RCOR1HCFC1JUNDZBTB7BGATAD2BMYCMBD2DPF2NCOA3FOSESR1MTA1FOXA1CREB1CTBP1CUX1SMARCE1FOSFOXA1ZNF217ATF7MYCZNF687ZNF592
NCKAP5GH02J133532-None0.0000Enhancer71-C-HiC,Distancechr2:133532989-133533139ENSR2_93Z233
CTCFMTA2
NCKAP5GH02J133564-None0.0000Enhancer54-eRNA_co-expression,Distancechr2:133564835-133565060-
CTCFRAD21
NCKAP5GH02J133566-2:133567656:C:CCT1.0021Promoter/Enhancer469EliteeQTLs,Distancechr2:133566569-133568858ENSR2_BZHNZ, ENSR2_BZHP4, ENSR2_93Z2FC, NCKAP5_3
YY1CTCFCREB1SIN3AJUNDMAXFOSL2RXRAATF3RESTTAF1FOSFOXA1BHLHE40SP1HNF4APOLR2ARAD21CTCFTAF1POLR2AFOXA1EP300RAD21MNTSP1SIN3AJUNDCREB1MAXRESTATF3ATF2HNF4GZBTB40FOXA2HNF4A
NCKAP5GH02J133571-None0.0000Enhancer1-Distancechr2:133571349-133571439--
NCKAP5GH02J133578-2:133579710:C:G0.2485Enhancer195EliteeQTLs,Distancechr2:133578957-133580237ENSR2_93Z2JH
ZBTB33YY1NR2F2MAXJUNDATF3HNF4ARAD21SP1FOSHNF4GPOLR2AESR1RXRAGATA2CTCF
NCKAP5GH02J133580-2:133581793:G:T0.6120Enhancer99-eQTLs,Distancechr2:133580607-133581942ENSR2_BZHR2
ATF2CREB1JUNDFOSGATA3ATF7GATA2CTCFSIN3ARAD21PKNOX1
NCKAP5GH02J133590-2:133590594:T:C0.7475Enhancer56-Distancechr2:133590569-133590719ENSR2_BZHSD
EBF1
NCKAP5GH02J133591-None0.0000Enhancer36-Distancechr2:133590840-133591148ENSR2_BZHSD
CTCFSP1
NCKAP5GH02J133592-None0.0000Enhancer71-Distancechr2:133591289-133591439ENSR2_BZHSD
CTCFSP1RAD51RAD21USF2USF1BHLHE40
NCKAP5GH02J133600-2:133600498:G:A0.6745Enhancer1-Distancechr2:133600429-133600499-
USF1
NCKAP5GH02J133607-2:133607925:A:G1.5713Enhancer1-Distancechr2:133607423-133608544ENSR2_93Z2SN
FOSRAD21GATA2GATA2
NCKAP5GH02J133633-2:133633643:A:G1.2165Enhancer105-C-HiC,Distancechr2:133633641-133634582ENSR2_BZJ3M
CEBPBRAD21GATA3
NCKAP5GH02J133640-2:133642611:G:T1.1948Promoter/Enhancer319EliteDistancechr2:133640769-133642704ENSR2_536FP73, ENSR2_BZJ4P, ENSR2_BZJ4W, NCKAP5_1
POLR2ACTCFMBD2JUNDCLOCKNFIBZNF592ZNF579ELK1MNTRAD51ELF1NEUROD1ZNF687PKNOX1MYCZNF444GATA3ZNF217ZNF24RCOR1GATAD2BESR1RESTRAD21CTBP1SIN3ADPF2SMARCE1FOXA1TRIM22CUX1
NCKAP5GH02J133643-None0.0000Enhancer36-Distancechr2:133643049-133643199ENSR2_BZJ4W
EP300JUNDMAFK
NCKAP5GH02J133651-2:133652270:T:A0.8976Enhancer56-Distancechr2:133651748-133653681ENSR2_BZJ6B
FOSSP1YY1EP300
NCKAP5GH02J133666-2:133667245:GA:G0.4182Enhancer146-Distancechr2:133666730-133667861ENSR2_93Z3GT
RESTZBTB33GABPAYY1RXRARAD21EGR1POLR2AJUNDCREB1SP1HNF4GGATA2ATF3FOXA2NFE2L2HNF4AGATA3NFE2CEBPBMAFKRCOR1FOSBHLHE40
NCKAP5GH02J133673-2:133676321:A:T1.0754Promoter/Enhancer487EliteDistancechr2:133673641-133677176ENSR2_CH95R, ENSR2_BZJ9R, NCKAP5_2
FOSL2TAF1RAD21ZBTB33MNTMAXJUNDRESTHNF4AFOXA1NR3C1BHLHE40SP1RXRAMYCUSF2FOXA2USF1POLR2AYY1SIN3AHDAC2NFIBASH2LTRIM28FOXA1L3MBTL2MAXEGR1YY1RAD21POLR2AHNF4ABHLHE40NANOGCEBPBRXRAPKNOX1TBPATF4CEBPBFOSNFE2L2
NCKAP5GH02J133681-2:133683475:A:T0.8380Enhancer1-Distancechr2:133681931-133683891ENSR2_85X59K-
NCKAP5GH02J133684-2:133686449:G:A1.3249Enhancer1-Distancechr2:133684903-133686458--
NCKAP5GH02J133710-2:133711884:A:G0.1391Enhancer56-Distancechr2:133710769-133712112-
EP300GATA3MXI1CEBPBRFX5GATA2RCOR1RAD21REST
NCKAP5GH02J133714-None0.0000Enhancer9-Distancechr2:133714838-133714861--
NCKAP5GH02J133718-2:133718911:G:A0.0264Enhancer56-Distancechr2:133718539-133719199ENSR2_BZJHW
RCOR1JUNDSIN3AYY1USF1MNT
NCKAP5GH02J133727-None0.0000Enhancer1-Distancechr2:133727200-133727400-
REST
NCKAP5GH02J133733-2:133733695:C:T0.5998Enhancer36-Distancechr2:133733489-133734622ENSR2_85X6DD
MAFK
NCKAP5GH02J133755-2:133755866:G:A0.8738Enhancer173EliteDistancechr2:133755174-133756600ENSR2_BZJP8
EP300NFE2L2CEBPBBHLHE40NR2F2
NCKAP5GH02J133760-2:133760615:A:G0.6931Enhancer105-Distancechr2:133760335-133760785ENSR2_BZJPW
RCOR1MAFKRXRACEBPBNR2F2HNF4A
NCKAP5GH02J133765-None0.0000Enhancer195-Distancechr2:133765789-133765999ENSR2_BZJQN
CTCFRESTSP1KDM1AMAXHNF4ARXRAGABPAEP300XRCC5YY1TCF12EGR1ATF3NR2F6RAD21JUNDCREMTBX3NR2F2NR3C1ARID3ASOX13FOXA1ZBTB33TCF7FOXA2HNRNPKHNF4GCEBPBUSF1POLR2AHDAC2
NCKAP5GH02J133773-2:133774051:T:C1.0014Enhancer36-Distancechr2:133773925-133774970ENSR2_BZJRW, ENSR2_85X792
CTCFEP300ATF2CREB1