GWAS Annotated Elements: NECTIN1

Gene: nectin cell adhesion molecule 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH11J119626 - 11:119627046:T:G 0.4747 Enhancer - Distance chr11:119626361-119627364
KDM1AZNF143ETV4TCF7PCBP1IKZF1
GH11J119633 - 11:119635545:C:G 0.7476 Enhancer - Distance chr11:119633946-119636562
ZNF316
GH11J119659 - 11:119660720:C:T 0.1650 Enhancer Elite Distance chr11:119659167-119660995
MEF2BEBF1
GH11J119663 - 11:119664140:G:T 0.1774 Enhancer Elite Distance chr11:119663470-119664800
SOX13MNTNCOR1NR2F6ZNF384HNRNPLEP300RESTZBTB7AXRCC5KDM1AFOXA1FOXA2CREMCTCFSP1PRPF4SMARCA4RXRATFAP4HDAC2HNF4GSKIJUNDHNF4A
GH11J119665 - None 0.0000 Enhancer Elite Distance chr11:119665790-119665800
CTCF
GH11J119666 - 11:119667311:T:G 0.6091 Enhancer Elite Distance chr11:119666332-119667486
CTCFRBM39SMC3AGO1NBNRAD21HNRNPLLSIN3AHNRNPLMXI1XRCC5ATF7ZNF207EP300TRIM22SKILNR2F2CC2D1ATBPCTBP1UBTFBHLHE40NR2F1NRF1CUX1POLR2ATBL1XR1YY1RB1MYCARID2ESRRARXRAELK1RESTZNF143JUNDSMARCA4BATFZNF263RUNX3IKZF1FOSSTAT3POLR2A
GH11J119669 - 11:119669995:T:C 0.1194 Enhancer - Distance chr11:119669382-119670063 -
GH11J119670 - 11:119674012:C:T 0.4686 Enhancer Elite Distance chr11:119670856-119674460
MXI1SP1RCOR1SMARCA4RAD21RXRANR2F2GATA2HCFC1ZNF143MXI1EP300POLR2AZBTB40ZNF592NFXL1ZNF217ZNF143SMARCA5IKZF1EBF1RELBIRF4STAT5AYY1CTCFTAF1TRIM22JUNBBATFSMC3KLF5DPF2RB1HDAC1SIN3ATBPSTAT3POLR2ACREMATF2ELK1IKZF2L3MBTL2PKNOX1TCF12RESTEEDNFICBHLHE40MTA2MEF2BATF7RAD21MEF2CNRF1ARNTMAXBMI1MEF2ARAD51SKILBCL3MXI1ETV6FOXK2USF2ARID3ATBX21ZNF687ZSCAN29RUNX3CUX1TBL1XR1NBNPAX5EP300E2F8RFX5MLLT1GATAD2BELF1NFYBNFATC3BACH1MYBSRFSPI1PBX3
GH11J119675 - 11:119676529:G:A 0.7618 Enhancer - Distance chr11:119675860-119678469
ZNF184NR2F2NFE2L2CTCFFOSBHLHE40TRIM28ZBTB7BCBX5
GH11J119680 - 11:119681122:C:T 0.9858 Enhancer Elite Distance chr11:119680448-119681667
CTCFRFX5ZNF217CTBP1POLR2ADPF2FOXA1EP300GATA3ESR1CTCFHNRNPLSMC3RAD21
GH11J119683 - 11:119685532:G:C 1.8277 Enhancer Elite eRNA_co-expression,Distance chr11:119683142-119687800
MEF2BEBF1YY1USF1RAD51MAFKC11orf30POLR2ACREB1MAFFSTAT3ZNF316MNTCLOCKPRDM10EEDGABPB1GABPAYY1SMARCA4JUNDNR2F2RUNX3STAT3CEBPBNR3C1FOSFOSL2JUNATF3MAFKMXI1GATA2CTCFPOLR2AEP300
GH11J119688 - 11:119688754:A:G 0.0396 Enhancer Elite Distance chr11:119688600-119688800 -
GH11J119689 - None 0.0000 Enhancer Elite Distance chr11:119689390-119689540 -
GH11J119690 - 11:119695525:G:A 0.6384 Enhancer Elite eRNA_co-expression,Distance chr11:119690164-119702813
IKZF1MLLT1IKZF2MTA2TRIM22BHLHE40ELF1EP300TBX21DPF2EBF1RUNX3RBM39GATAD2BCTCFRAD21POLR2AMYCSTAT3FOSEGR1ATF2PKNOX1POLR2AATF7IKZF1BHLHE40CTCFRUNX3RESTSKIGABPANR2F2XRCC5NR2F6MAXSP1JUNDZNF687ELF1EP300RXRAHNF4ATFAP4POLR2AHDAC2HNF4GSMC3RAD21FOSL2FOXA1TRIM28GATA2ESR1POLR2AMYCSTAT3FOSPOLR2ACTCFMYCFOSKDM1ABCORRBM25ZMYM3HNRNPLSPI1POLR2ASP1NR2F2HNF4AHNRNPLLXRCC5RXRAJUNDTFAP4HNF1AMAXRAD21NR2F2RXRAEGR1HNF4ASP1STAT3NR2F6SP1FOSFOSL2ZKSCAN1KDM1AZMYM3TRIM28CTCFFOSMXI1RCOR1CTCFSMARCA4SPI1
GH11J119704 - 11:119705647:G:A 0.3806 Enhancer Elite Distance chr11:119704543-119705674
TRIM28HDAC1NCOR1NR2F6KLF16LEF1TAL1CBFA2T3KDM1ANR2F1NR2F2HDAC2GATA1CBFA2T2TEAD4TCF7TCF12HDAC2KDM1A
GH11J119705 - 11:119706967:C:T 1.0536 Enhancer - Distance chr11:119705985-119707879
KDM1ARESTGATA3CTCFTRIM22RAD21RXRA
GH11J119709 - 11:119710175:A:G 0.1197 Enhancer Elite Distance chr11:119709222-119710384
ASH2LEEDRFX1SIN3AZNF143BMI1RFX5RUNX3RCOR1SMARCA4RELBSMC3MLLT1SPI1MXI1
GH11J119712 - 11:119713041:C:T 0.3084 Enhancer Elite Distance chr11:119712200-119714000
ASH2LSP1RESTGABPASPI1CTCFRBM39HDAC2POLR2ARXRAHNRNPKPCBP1HNF1ASP1HNF4GHNF4ATFAP4GATA4ZBTB7A
GH11J119715 - 11:119715708:C:T 0.3820 Enhancer - Distance chr11:119715540-119716569
NR2F6CTCFZSCAN29
GH11J119716 - None 0.0000 Enhancer Elite Distance chr11:119716890-119717040
CTCFBHLHE40USF2
GH11J119717 - None 0.0000 Enhancer - Distance chr11:119717950-119718835
SMARCA4SP1NR2F2HNF4ARCOR1RXRATCF7L2TCF7
GH11J119721 - None 0.0000 Enhancer Elite Distance chr11:119721170-119721440
ZNF263CTCFIKZF1XRCC5RESTEGR1TRIM22ZNF143RB1RAD21SMC3MXI1
GH11J119724 - 11:119721744:G:A 0.2087 Enhancer Elite Distance chr11:119721675-119722020
CTCFMXI1FOS
GH11J119722 - 11:119722742:A:G 0.1396 Enhancer Elite Distance chr11:119722400-119722800
RELBIKZF1IKZF2RUNX3MTA2IRF4EBF1GATAD2BSPI1BHLHE40TCF12BCL11APOLR2ACTCF
GH11J119723 - 11:119724499:G:A 0.3922 Enhancer - Distance chr11:119723601-119724640
POLR2A
GH11J119725 - 11:119728019:G:C 0.5177 Promoter/Enhancer Elite Distance chr11:119725678-119730962
MXI1CTCFEBF1POLR2ASUZ12KDM1ASIN3AHDAC2SP1ETS1ZNF143SAP30POLR2AMXI1USF1HDAC2SIN3AL3MBTL2CHD1KDM4AHNRNPLXRCC5SMC3PHF8EZH2EBF1RAD21IKZF2IKZF1GATAD2BMEF2BCTCFEEDRXRASMARCA5ZNF143BACH1BHLHE40TAF15ZNF592EP300POLR2ASAP30HNRNPLLZEB1KDM5BBHLHE40ZFXIKZF1RESTARNTSAP30ZNF217RAD21MXI1POLR2GCTCFDPF2SMC3POLR2AASH2LSMARCA5YY1BHLHE40RBFOX2HDAC2SP1RBBP5SIN3ATAF1FOXM1TBPTAF7PHF8UBTFNRF1CREB1EP300SKILCTBP1L3MBTL2ZNF263MYCXRCC5PTBP1CREMMTA3HNRNPLLNR3C1SKIZNF207HNRNPKARID3AGATAD2ARB1ATF7TRIM22HDAC1ZNF687DPF2ZBTB7ASUZ12ZNF143TFAP4RNF2DACH1ZNF444EEDGATAD2BJUNDZNF592TBL1XR1SMARCA4E2F6TCF12EGR1KDM4ASMARCA5FOSBACH1GABPANBNSP1POLR2AELF1IKZF1GATA3ARNTTAF1IKZF2RELBSPI1FOSJUNDGATA2