GWAS Annotated Elements: NTRK3

Gene: neurotrophic receptor tyrosine kinase 3

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH15J087871 - None 0.0000 Enhancer - Distance chr15:87871509-87871659
MAFK
GH15J087875 - None 0.0000 Enhancer - Distance chr15:87875389-87875539 -
GH15J087877 - None 0.0000 Enhancer - Distance chr15:87877176-87878090
SP1GATA3CBFA2T3GATA2MXI1RCOR1CREB1FOSFOSL2NFICJUNDGATA1CEBPBCREM
GH15J087901 - 15:87902263:C:A 0.3480 Enhancer - Distance chr15:87901825-87902580
MAFK
GH15J087903 - None 0.0000 Enhancer Elite Distance chr15:87902999-87903447
FOSEP300NFE2BHLHE40
GH15J087940 - None 0.0000 Promoter - Distance chr15:87940751-87940811 -
GH15J087941 - None 0.0000 Enhancer - Distance chr15:87941749-87941879
FOS
GH15J087973 - 15:87973920:G:T 0.2191 Enhancer - Distance chr15:87973869-87974019 -
GH15J088010 - 15:88010465:C:T 0.1367 Enhancer - eRNA_co-expression,Distance chr15:88010271-88010551 -
GH15J088036 - 15:88036259:G:C 0.2163 Enhancer - Distance chr15:88036229-88036419
CHD7NANOGSP1SPI1
GH15J088037 - 15:88036771:C:T 0.5419 Enhancer - Distance chr15:88036428-88037076
CHD7NANOGSP1SPI1
GH15J088073 - None 0.0000 Enhancer - Distance chr15:88073166-88073600
KDM1ANANOGSP1USF1
GH15J088083 - None 0.0000 Enhancer - Distance chr15:88083909-88084059 -
GH15J088084 - None 0.0000 Enhancer - Distance chr15:88084203-88084574 -
GH15J088090 - 15:88090547:C:A 0.5342 Enhancer - Distance chr15:88090432-88090634
SMARCA4
GH15J088091 - None 0.0000 Enhancer - Distance chr15:88090641-88091102
SMARCA4
GH15J088114 - None 0.0000 Enhancer - Distance chr15:88114049-88114199 -
GH15J088126 - 15:88127499:C:G 0.3154 Enhancer - Distance chr15:88126286-88128029
FOSSMARCA4
GH15J088144 - 15:88145249:C:T 0.5687 Enhancer - Distance chr15:88144680-88145871 -
GH15J088156 - None 0.0000 Enhancer - Distance chr15:88156443-88156510 -
GH15J088220 - None 0.0000 Enhancer - Distance chr15:88220788-88221079 -
GH15J088238 - 15:88238613:G:A 0.3666 Enhancer Elite Distance chr15:88238399-88239635
ATF7ATF3CEBPBATF4EP300BHLHE40ZFXZMYM3RCOR1
GH15J088246 - 15:88247146:T:G 0.4326 Enhancer Elite Distance chr15:88246700-88247498
TCF12CTCFKDM4AFOSL2MXI1C11orf30YY1RAD21SMC3L3MBTL2ETS1ZNF263MAFKSIN3AEP300PKNOX1MTA1XRCC5RBM39TRIM22MAFFMYCTBPHCFC1MNTBACH1RB1BHLHE40KLF16ESRRARFX5SMARCA4E2F6ELF1ZNF143NFIBJUNDZNF316SMARCA5MAXPOLR2ARESTNANOGFOXA1SPI1RUNX3FOXA2ZNF444EZH2
GH15J088255 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr15:88255182-88255367
SUZ12EZH2RNF2KDM4AMXI1HDAC2
GH15J088256 - None 0.0000 Enhancer - Distance chr15:88255709-88255859
SUZ12EZH2RNF2KDM4AMXI1HDAC2RBBP5ZNF263SMC3TAF1EP300USF1CTCFFOSKDM1A
GH15J088259 - None 0.0000 Promoter Elite Distance chr15:88256168-88256401
EZH2KDM4AKDM1AHNRNPKEP300CHD1RNF2CTCFSMC3MXI1ASH2LSIN3A
GH15J088257 - None 0.0000 Promoter/Enhancer Elite Distance chr15:88256600-88257359
EZH2HNRNPKEP300CHD1RNF2CTCFSMC3MXI1ASH2LSIN3AKDM1AKDM4AZBTB33ZNF263POLR2AZNF263SUZ12ASH2LKDM4AEZH2PHF8RNF2
GH15J088258 - 15:88258904:AC:A 0.4009 Enhancer - Distance chr15:88258149-88259039
EZH2PHF8RBBP5KDM4ASIN3ACTCFSP1RAD21POLR2AASH2LSMC3TBPTAF1YY1NFIBZNF143ZNF574EGR1NFIC
GH15J088274 - None 0.0000 Enhancer - Distance chr15:88274669-88274799
CTCFZNF263RAD21SMC3ZNF143TRIM22RESTZNF444KLF16SMARCA4MYCSMARCA5CTBP1
GH15J088302 - None 0.0000 Enhancer - eRNA_co-expression chr15:88302091-88302443 -
GH15J088380 - 15:88384491:G:A 0.7455 Enhancer - eQTLs chr15:88380835-88386891
CTCFBCL3NFIBFOSL2NR3C1SP1JUNDTCF12RFX1FOXA1RESTTAF1ATF3CTBP1FOSBCL3RESTFOXA1JUNDSP1FOSL2NR3C1ZBTB33TCF12