GWAS Annotated: PDE1C

Gene: phosphodiesterase 1C

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
PDE1CGH07J031647-7:31647120:T:C1.8441Enhancer56-Distancechr7:31647086-31647196ENSR7_8X5BB
NANOG
PDE1CGH07J031651-7:31651541:G:A1.5767Enhancer36-Distancechr7:31651366-31651576-
HDAC2CHD7TCF12SP1
PDE1CGH07J031652-None0.0000Enhancer91-Distancechr7:31651886-31652056-
ZFXZNF217CTCFRAD21ZNF24CEBPB
PDE1CGH07J031664-None0.0000Enhancer78EliteDistancechr7:31664800-31665400-
RXRAEP300CEBPB
PDE1CGH07J031688-None0.0000Promoter/Enhancer273EliteDistancechr7:31687126-31687225ENSR7_8X66G, PPP1R17_1
SMC3EP300RFX1GATA2TAL1TBPSMARCA4
PDE1CGH07J031687-7:31687839:A:G1.0387Enhancer347EliteDistancechr7:31687800-31689200ENSR7_9GKL6
GATAD2BEP300IKZF1MEF2BRELBSRFBMI1NFATC3RUNX3IKZF2ARNTTBX21MTA2ESRRADPF2SPI1BACH1BHLHE40ATF7TBP
PDE1CGH07J031699-7:31699173:AAAGGTTCTGAGG:A0.1357Enhancer50-Distancechr7:31699125-31699323-
SPI1
PDE1CGH07J031710-None0.0000Enhancer71-Distancechr7:31710326-31710516ENSR7_9GKSG
HDAC2EP300CHD7NANOGSP1JUND
PDE1CGH07J031734-None0.0000Enhancer82-Distancechr7:31734526-31734776ENSR7_9GL4G
ATF2FOSATF7CREB1
PDE1CGH07J031736-7:31736629:T:C0.1383Enhancer140-Distancechr7:31736026-31736636ENSR7_9GL52, ENSR7_59GJRK
CTCFSMC3RAD21ZNF217ZNF143ZNF444YY1TEAD4CHD1JUNDRCOR1ZNF24PRDM10CLOCKSMARCA5TRIM22REST
PDE1CGH07J031747-7:31747251:C:T0.4272Enhancer111-Distancechr7:31747166-31748500ENSR7_9GL89, ENSR7_8X7GT
SREBF1GATA3FOSATF7JUNGATA3CREB1FOSFOXA1FOSL2PKNOX1
PDE1CGH07J031811-7:31811423:G:A1.5812Enhancer312EliteDistancechr7:31811200-31812605ENSR7_B8BGF
SMARCA5MXI1SPI1IKZF1EEDYY1GATAD2BIKZF2MTA2ARNTNBNRAD51BHLHE40RCOR1ATF2DPF2JUNBATF7MLLT1FOSESRRAEP300SMARCA4RELBNFATC3BMI1SKILPKNOX1ARID3APAX5TBX21IRF4CEBPBMEF2BTBL1XR1PBX3BCL11ASPI1ZNF592ELF1TRIM22BATFCTCFSPI1ZBTB40
PDE1CGH07J031875-7:31875440:C:T0.4127Enhancer144EliteDistancechr7:31875000-31875600ENSR7_8XB7K
MAFKNFE2L2NFE2GABPAFOSSPI1EP300
PDE1CGH07J031876-None0.0000Enhancer36-Distancechr7:31876785-31877459-
MNT
PDE1CGH07J031881-None0.0000Enhancer1-Distancechr7:31881015-31881415-
CTCF
PDE1CGH07J031882-7:31882529:T:C0.6318Enhancer1-Distancechr7:31882200-31882600ENSR7_9GMN8
CTCFRAD21SRF
PDE1CGH07J031883-7:31884515:T:C0.5557Enhancer286EliteDistancechr7:31883401-31884517ENSR7_9GMNN
MAFKPOLR2AIKZF1ATF7BHLHE40RFX5GABPAPKNOX1TBX21CEBPBFOSFOXA1ETS1SPI1EP300MYCSTAT3MEF2ACEBPB
PDE1CGH07J031889-7:31889853:C:G0.5337Enhancer1-Distancechr7:31889327-31889911--
PDE1CGH07J031890-7:31891255:C:G0.5881Enhancer185EliteDistancechr7:31890000-31891400ENSR7_9GMQJ
PKNOX1GABPASPI1EP300SP1BHLHE40CTCFCEBPBFOSGABPAREST
PDE1CGH07J031892-7:31892583:G:A0.4308Enhancer149-Distancechr7:31892015-31892672-
ZNF207MEF2BSMC3PAX5IKZF1IKZF2CUX1BHLHE40DPF2PKNOX1STAT3SMAD1MTA2RELBIRF4ARNTNFATC3TBX21GATAD2BTBL1XR1TCF12EBF1BCL3TRIM22BCL11AATF2JUNBEP300NFICPOU2F2SKILCBX5MLLT1ZNF217BATFMEF2AATF7RUNX3ARID3AZNF592
PDE1CGH07J031894-7:31895355:T:C1.0025Enhancer56-Distancechr7:31894067-31895515-
MAFK
PDE1CGH07J031896-7:31896963:T:C0.9361Enhancer91-Distancechr7:31896780-31897340ENSR7_9GMSH
GABPABCL3FOSL2TRIM28FOXA1CREB1SP1TCF12CEBPBEP300
PDE1CGH07J031903-7:31904372:C:A0.7353Enhancer1-Distancechr7:31903916-31904539--
PDE1CGH07J031905-7:31906101:C:T0.9853Enhancer1-Distancechr7:31905668-31906135--
PDE1CGH07J031906-7:31906946:A:G0.5694Enhancer1-Distancechr7:31906199-31907626-
MNT
PDE1CGH07J031908-7:31908940:G:T0.2025Enhancer82-Distancechr7:31908206-31909488-
JUNBATF4MYCCTCFATF7CREB1ATF2
PDE1CGH07J031909-7:31909895:CTT:C1.4060Enhancer1-Distancechr7:31909650-31911012--
PDE1CGH07J031913-7:31913364:G:A0.9896Enhancer1-Distancechr7:31913067-31914187--
PDE1CGH07J031914-7:31915071:T:A0.5290Enhancer1-Distancechr7:31914817-31915716--
PDE1CGH07J031916-7:31916854:G:A1.1562Enhancer1-Distancechr7:31916364-31917443-
CREB1
PDE1CGH07J031918-7:31918401:C:T1.1679Enhancer1-Distancechr7:31918154-31920569-
MAFK
PDE1CGH07J031922-7:31922843:T:A0.2101Enhancer1-Distancechr7:31922834-31923546--
PDE1CGH07J031935-7:31935124:G:A1.0122Enhancer56-Distancechr7:31935069-31935843ENSR7_9GN8J
GATA2RESTSP1FOXA1SPI1TCF12
PDE1CGH07J031936-7:31937254:C:T0.0274Enhancer1-Distancechr7:31936691-31937265-
NR3C1
PDE1CGH07J031942-7:31942100:T:G0.5668Enhancer1-Distancechr7:31942013-31942603--
PDE1CGH07J031943-7:31944316:G:T0.6722Enhancer1-Distancechr7:31943865-31944586--
PDE1CGH07J031946-None0.0000Enhancer9-eRNA_co-expression,Distancechr7:31946218-31946580--
PDE1CGH07J031947-7:31948540:G:A0.9957Enhancer270EliteDistancechr7:31947328-31949291ENSR7_B8C75
FOSL2FOXA1TCF12IKZF1SIN3ACTCFDPF2IKZF2GABPAZNF687BCL3FOSZBTB33RESTATF3EP300ARID3AATF7BHLHE40SP1HNF4AJUNDFOSL2HNF4GFOXA1CEBPBSMARCE1FOXA2NFATC3CEBPB
PDE1CGH07J031950-7:31950876:G:A1.0191Enhancer1-Distancechr7:31950693-31952008ENSR7_9GNDX
NBNIKZF2IKZF1DPF2TBX21FOS
PDE1CGH07J031953-7:31954032:C:T1.0083Enhancer56-Distancechr7:31953883-31954714-
FOXA1ZBTB40
PDE1CGH07J031954-7:31955437:T:C1.0123Enhancer56-Distancechr7:31954942-31955536-
TCF12SP1FOXA1
PDE1CGH07J031955-7:31955655:T:C1.0149Enhancer36-Distancechr7:31955543-31956256-
CREB1RFX5GABPATCF12SIN3ASP1
PDE1CGH07J031958-7:31958478:C:T0.0532Enhancer118EliteDistancechr7:31958328-31958478ENSR7_9GNH8
TCF12SP1FOSL2FOXA1CEBPBFOSSTAT3
PDE1CGH07J031960-7:31960317:A:G0.2338Enhancer1-Distancechr7:31960026-31960504--
PDE1CGH07J031961-7:31962793:C:A1.2866Enhancer1-Distancechr7:31961922-31963094--
PDE1CGH07J031963-7:31964173:G:A0.2525Enhancer1-Distancechr7:31963629-31964287--
PDE1CGH07J031971-7:31971474:G:A0.5863Enhancer1-Distancechr7:31971407-31972150-
FOS
PDE1CGH07J031974-7:31975317:T:C0.4268Enhancer1-Distancechr7:31974806-31975596--
PDE1CGH07J031979-7:31979699:T:C0.9866Enhancer36-Distancechr7:31979314-31981148-
EP300ZFX
PDE1CGH07J031981-7:31982171:G:A0.8359Enhancer1-Distancechr7:31981725-31983045-
ATF4
PDE1CGH07J031983-7:31983623:AT:A1.1220Enhancer1-Distancechr7:31983147-31984571--
PDE1CGH07J031986-7:31987437:G:A0.5217Enhancer232EliteDistancechr7:31986461-31988355ENSR7_B8CDR
ATF7GATA2FOSFOSL2JUNDRESTFOXA1TCF12YY1POLR2ACTCF
PDE1CGH07J031989-7:31989796:T:C0.1127Enhancer1-Distancechr7:31989480-31990286--
PDE1CGH07J031991-7:31992037:G:A0.9067Enhancer1-Distancechr7:31991787-31992667ENSR7_9GNSX
FOSGATA2
PDE1CGH07J031995-7:31996580:G:A0.0967Enhancer36-Distancechr7:31995969-31996598-
SMARCA4
PDE1CGH07J031997-7:31997622:C:T0.6248Enhancer1-Distancechr7:31997271-31997889-
CTCFEP300
PDE1CGH07J031998-7:31999197:G:A0.5042Enhancer1-Distancechr7:31998777-31999746--
PDE1CGH07J031999-7:32000754:T:C1.3982Enhancer1-Distancechr7:31999896-32000826--
PDE1CGH07J032018-7:32019713:A:C1.7161Enhancer173EliteeQTLs,Distancechr7:32018725-32020128-
KDM1ACREMFOXA2HNF4AHNF4GFOXA1EP300ZNF384
PDE1CGH07J032021-7:32020394:G:A0.1673Enhancer1-Distancechr7:32020348-32020498--
PDE1CGH07J032020-None0.0000Enhancer63EliteDistancechr7:32020668-32020818-
CEBPBEP300
PDE1CGH07J032024-7:32025652:T:C2.1253Enhancer1-eQTLs,Distancechr7:32024805-32026357--
PDE1CGH07J032031-7:32031533:C:G2.4089Enhancer36-Distancechr7:32031287-32033448-
EP300CEBPBSPI1MNTFOSJUND
PDE1CGH07J032035-7:32035823:T:C1.7904Enhancer1-eQTLs,Distancechr7:32035614-32036412--
PDE1CGH07J032038-7:32039811:T:C2.0582Enhancer126-eQTLs,Distancechr7:32038813-32040172ENSR7_8XFPF, ENSR7_59JGQ9
FOSMAFKATF3SP1TCF12RESTNR3C1BCL3FOSL2FOXA1FOXA2JUNDCTCFGATA3CEBPBSREBF1YY1CTBP1MTA1FOXA1FOXA2SMC3MYCRAD21
PDE1CGH07J032040-7:32040919:T:C2.4122Enhancer1-eQTLs,Distancechr7:32040438-32041694--
PDE1CGH07J032043-7:32043563:C:A0.2152Enhancer210EliteDistancechr7:32043421-32044168ENSR7_9GPDX
CTCFYY1GATA3MTA2ZBTB33MAFKCTBP1SIN3ADPF2BHLHE40EP300GABPAFOSBCL3ATF3TCF12JUNDRCOR1ZHX2FOXA1RFX5NR3C1MTA1BCL11AESRRASP1JUNSMARCE1CREB1BATFFOSL2CUX1ATF7
PDE1CGH07J032046-7:32047129:C:T0.4909Enhancer99-eQTLs,Distancechr7:32046794-32047449ENSR7_8XFTT
MEF2BIKZF1IKZF2TBX21EP300BMI1MTA2PKNOX1SPI1
PDE1CGH07J032048-7:32054039:A:G2.3061Enhancer111-eQTLs,Distancechr7:32048260-32055784-
ZBTB33GATA3DPF2IKZF2ZNF687IKZF1ELF1ATF7TBX21ZNF217MEF2BMTA2BCL11APBX3BHLHE40ZNF316MAFFMAFKSMARCA4TRIM28ARNT
PDE1CGH07J032055-7:32057146:G:A2.0884Enhancer1-eQTLs,Distancechr7:32055891-32058715-
EP300JUNDFOSSMARCA4
PDE1CGH07J032059-7:32059816:T:G0.4485Enhancer180EliteeQTLs,Distancechr7:32059246-32060680ENSR7_B8CRB, ENSR7_59JLCJ
TRIM28FOXA1
PDE1CGH07J032060-7:32062389:C:T2.4404Enhancer105-eQTLs,Distancechr7:32060948-32063235ENSR7_59JLJC, ENSR7_9GPLB
CTCFCTBP1HCFC1ZNF444YY1SMC3RAD21NFIBXRCC5TRIM22NFICZNF143
PDE1CGH07J032065-7:32067193:C:T3.3525Enhancer1-eQTLs,Distancechr7:32065047-32068200-
FOSBCL3
PDE1CGH07J032068-None0.0000Enhancer63EliteDistancechr7:32068600-32068800--
PDE1CGH07J032069-7:32070503:C:G3.4835Promoter/Enhancer470EliteeQTLs,Distancechr7:32069599-32071803ENSR7_B8CST, ENSR7_59JN35, ENSR7_59JN6B, ENSR7_8XGDQ, ENSR7_8XGDT, PDE1C_1, PDE1C_2, PDE1C_3
EZH2FOSL2PHF8BCL3SUZ12POLR2AASH2LYY1HDAC2RNF2CTCFTBPRBBP5MXI1SIN3ASMC3POLR2AEP300KDM4ARAD21YY1FOXA1CTCF
PDE1CGH07J032073-7:32073886:A:T3.1435Enhancer36-Distancechr7:32073378-32073976ENSR7_8XGG7
KDM1AZMYM3RBM25CREB1
PDE1CGH07J032075-7:32075376:A:G0.3513Enhancer71EliteeQTLs,eRNA_co-expression,Distancechr7:32075324-32075496--
PDE1CGH07J032077-7:32078927:C:CA0.7137Enhancer1-eQTLs,Distancechr7:32077643-32079022-
MAFK
PDE1CGH07J032079-7:32080338:T:G3.0019Enhancer56-eQTLs,Distancechr7:32079095-32080655-
CTCFTAL1CBFA2T3
PDE1CGH07J032088-7:32088476:C:T2.6257Enhancer56-eQTLs,Distancechr7:32088114-32090048ENSR7_8XGQS
POLR2AFOSFOSZNF316CTCFMAFK
PDE1CGH07J032090-7:32090255:T:C2.6033Enhancer1-eQTLs,Distancechr7:32090091-32090719-
CTCF
PDE1CGH07J032093-7:32092558:C:T1.1804Enhancer98EliteeQTLs,Distancechr7:32092068-32092581-
RFX1JUND
PDE1CGH07J032092-7:32094014:C:G2.1295Enhancer314EliteeQTLs,Distancechr7:32092907-32094352ENSR7_B8CZ6
FOXA1FOSL2JUNDMAFKFOSNFE2L2TCF12SP1EP300STAT3CEBPBMYCGATA3FOXA1FOS
PDE1CGH07J032095-7:32095586:A:G0.1228Enhancer1-Distancechr7:32095128-32095641--
PDE1CGH07J032101-7:32102215:C:T0.5812Enhancer36-Distancechr7:32101600-32103406-
NFICNFIBPOLR2A
PDE1CGH07J032108-7:32109461:T:C0.4798Enhancer1-Distancechr7:32108473-32109474-
MYCSTAT3FOS
PDE1CGH07J032115-7:32115768:T:C0.1782Enhancer36-Distancechr7:32115428-32116503ENSR7_B8D4F
JUND
PDE1CGH07J032142-7:32143913:A:AC0.3085Enhancer1-Distancechr7:32142348-32144210ENSR7_B8D8C
FOSL2JUNDCTCF
PDE1CGH07J032161-7:32162516:G:C0.9583Enhancer288EliteDistancechr7:32161080-32164898ENSR7_9GQN4, ENSR7_C576M, ENSR7_59K8XZ, ENSR7_59K8ZF, ENSR7_9GQNW, ENSR7_59K96X
CTCFJUNDCEBPBCTCFATF4TCF12ATF3CTCFJUNDSP1BHLHE40FOSGATA2MYCJUNSTAT3FOSL2RESTYY1RAD21JUNDFOSRESTCEBPBCTCFSIN3ARAD21ZNF579KDM1ASREBF1ZNF444ZNF217TRIM22ELF1PKNOX1ZNF143FOXA1SMARCA5SMC3RAD21SMARCE1GATA3
PDE1CGH07J032204-7:32204449:A:G0.9093Enhancer199EliteDistancechr7:32204194-32204758ENSR7_B8DK7, ENSR7_59KJ36
JUNDTCF12SP1CTCFSMC3ZNF579RAD21ZNF217RESTGATA3YY1ZNF263SIN3ATRIM22ZNF444EP300RFX5MNTSMARCA5MYCZNF143
PDE1CGH07J032224-7:32225023:A:T0.5942Enhancer41-eRNA_co-expression,Distancechr7:32224906-32225284-
MAFK
PDE1CGH07J032250-7:32251118:A:G1.3294Enhancer11-eRNA_co-expression,Distancechr7:32250908-32251148-
SMARCA4EP300HNF4A
PDE1CGH07J032293-None0.0000Enhancer9-Distancechr7:32293307-32293437--
PDE1CGH07J032297-7:32297831:C:T0.3219Enhancer16-eRNA_co-expression,Distancechr7:32297786-32297900-
CTCF
PDE1CGH07J032336-7:32337431:A:G1.6762Enhancer36--chr7:32336212-32337457-
CTCFFOS
PDE1CGH07J032427-None0.0000Enhancer224--chr7:32427788-32427938ENSR7_B8FQJ
EZH2RESTCTCFASH2LNRF1ZNF263SIN3AMIER1HNRNPLLXRCC5RBBP5HDAC2ZBTB40DEAF1FIP1L1EHMT2MLLT1AFF1HDAC1MNTSUZ12CBX3RCOR1ZKSCAN1GATA3CHAMP1MAXMYCZNF24BACH1HCFC1TBPBHLHE40EP300RAD21ZNF143YY1CREMTAF7GABPACBX5SMARCE1ZBTB33SAP30JUND
PDE1CGH07J032428-None0.0000Promoter301-Distancechr7:32428020-32428080ENSR7_B8FQJ, ENSR7_59LXCS, PDE1C_4
EZH2RESTCTCFASH2LNRF1ZNF263SIN3AMIER1HNRNPLLXRCC5RBBP5HDAC2ZBTB40DEAF1FIP1L1EHMT2MLLT1AFF1HDAC1MNTSUZ12CBX3RCOR1ZKSCAN1CHAMP1MAXMYCZNF24BACH1HCFC1TBPBHLHE40EP300RAD21ZNF143YY1CREMTAF7GABPACBX5SMARCE1ZBTB33JUNDSMC3
PDE1CGH07J032491-7:32491949:GGC:G0.0036Enhancer44-eRNA_co-expressionchr7:32491735-32492099-
ZNF24NFXL1