GWAS Annotated Elements: PDE1C

Gene: phosphodiesterase 1C

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH07J031647 - 7:31647120:T:C 1.8441 Enhancer - Distance chr7:31647086-31647196
NANOG
GH07J031651 - 7:31651541:G:A 1.5767 Enhancer - Distance chr7:31651366-31651576
HDAC2CHD7TCF12SP1
GH07J031652 - None 0.0000 Enhancer - Distance chr7:31651886-31652056
ZFXZNF217CTCFRAD21ZNF24CEBPB
GH07J031664 - None 0.0000 Enhancer Elite Distance chr7:31664800-31665400
RXRAEP300CEBPB
GH07J031688 - None 0.0000 Promoter/Enhancer Elite Distance chr7:31687126-31687225
SMC3EP300RFX1GATA2TAL1TBPSMARCA4
GH07J031687 - 7:31687839:A:G 1.0387 Enhancer Elite Distance chr7:31687800-31689200
GATAD2BEP300IKZF1MEF2BRELBSRFBMI1NFATC3RUNX3IKZF2ARNTTBX21MTA2ESRRADPF2SPI1BACH1BHLHE40ATF7TBP
GH07J031699 - 7:31699173:AAAGGTTCTGAGG:A 0.1357 Enhancer - Distance chr7:31699125-31699323
SPI1
GH07J031710 - None 0.0000 Enhancer - Distance chr7:31710326-31710516
HDAC2EP300CHD7NANOGSP1JUND
GH07J031734 - None 0.0000 Enhancer - Distance chr7:31734526-31734776
ATF2FOSATF7CREB1
GH07J031736 - 7:31736629:T:C 0.1383 Enhancer - Distance chr7:31736026-31736636
CTCFSMC3RAD21ZNF217ZNF143ZNF444YY1TEAD4CHD1JUNDRCOR1ZNF24PRDM10CLOCKSMARCA5TRIM22REST
GH07J031747 - 7:31747251:C:T 0.4272 Enhancer - Distance chr7:31747166-31748500
SREBF1GATA3FOSATF7JUNGATA3CREB1FOSFOXA1FOSL2PKNOX1
GH07J031811 - 7:31811423:G:A 1.5812 Enhancer Elite Distance chr7:31811200-31812605
SMARCA5MXI1SPI1IKZF1EEDYY1GATAD2BIKZF2MTA2ARNTNBNRAD51BHLHE40RCOR1ATF2DPF2JUNBATF7MLLT1FOSESRRAEP300SMARCA4RELBNFATC3BMI1SKILPKNOX1ARID3APAX5TBX21IRF4CEBPBMEF2BTBL1XR1PBX3BCL11ASPI1ZNF592ELF1TRIM22BATFCTCFSPI1ZBTB40
GH07J031875 - 7:31875440:C:T 0.4127 Enhancer Elite Distance chr7:31875000-31875600
MAFKNFE2L2NFE2GABPAFOSSPI1EP300
GH07J031876 - None 0.0000 Enhancer - Distance chr7:31876785-31877459
MNT
GH07J031881 - None 0.0000 Enhancer - Distance chr7:31881015-31881415
CTCF
GH07J031882 - 7:31882529:T:C 0.6318 Enhancer - Distance chr7:31882200-31882600
CTCFRAD21SRF
GH07J031883 - 7:31884515:T:C 0.5557 Enhancer Elite Distance chr7:31883401-31884517
MAFKPOLR2AIKZF1ATF7BHLHE40RFX5GABPAPKNOX1TBX21CEBPBFOSFOXA1ETS1SPI1EP300MYCSTAT3MEF2ACEBPB
GH07J031889 - 7:31889853:C:G 0.5337 Enhancer - Distance chr7:31889327-31889911 -
GH07J031890 - 7:31891255:C:G 0.5881 Enhancer Elite Distance chr7:31890000-31891400
PKNOX1GABPASPI1EP300SP1BHLHE40CTCFCEBPBFOSGABPAREST
GH07J031892 - 7:31892583:G:A 0.4308 Enhancer - Distance chr7:31892015-31892672
ZNF207MEF2BSMC3PAX5IKZF1IKZF2CUX1BHLHE40DPF2PKNOX1STAT3SMAD1MTA2RELBIRF4ARNTNFATC3TBX21GATAD2BTBL1XR1TCF12EBF1BCL3TRIM22BCL11AATF2JUNBEP300NFICPOU2F2SKILCBX5MLLT1ZNF217BATFMEF2AATF7RUNX3ARID3AZNF592
GH07J031894 - 7:31895355:T:C 1.0025 Enhancer - Distance chr7:31894067-31895515
MAFK
GH07J031896 - 7:31896963:T:C 0.9361 Enhancer - Distance chr7:31896780-31897340
GABPABCL3FOSL2TRIM28FOXA1CREB1SP1TCF12CEBPBEP300
GH07J031903 - 7:31904372:C:A 0.7353 Enhancer - Distance chr7:31903916-31904539 -
GH07J031905 - 7:31906101:C:T 0.9853 Enhancer - Distance chr7:31905668-31906135 -
GH07J031906 - 7:31906946:A:G 0.5694 Enhancer - Distance chr7:31906199-31907626
MNT
GH07J031908 - 7:31908940:G:T 0.2025 Enhancer - Distance chr7:31908206-31909488
JUNBATF4MYCCTCFATF7CREB1ATF2
GH07J031909 - 7:31909895:CTT:C 1.4060 Enhancer - Distance chr7:31909650-31911012 -
GH07J031913 - 7:31913364:G:A 0.9896 Enhancer - Distance chr7:31913067-31914187 -
GH07J031914 - 7:31915071:T:A 0.5290 Enhancer - Distance chr7:31914817-31915716 -
GH07J031916 - 7:31916854:G:A 1.1562 Enhancer - Distance chr7:31916364-31917443
CREB1
GH07J031918 - 7:31918401:C:T 1.1679 Enhancer - Distance chr7:31918154-31920569
MAFK
GH07J031922 - 7:31922843:T:A 0.2101 Enhancer - Distance chr7:31922834-31923546 -
GH07J031935 - 7:31935124:G:A 1.0122 Enhancer - Distance chr7:31935069-31935843
GATA2RESTSP1FOXA1SPI1TCF12
GH07J031936 - 7:31937254:C:T 0.0274 Enhancer - Distance chr7:31936691-31937265
NR3C1
GH07J031942 - 7:31942100:T:G 0.5668 Enhancer - Distance chr7:31942013-31942603 -
GH07J031943 - 7:31944316:G:T 0.6722 Enhancer - Distance chr7:31943865-31944586 -
GH07J031946 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr7:31946218-31946580 -
GH07J031947 - 7:31948540:G:A 0.9957 Enhancer Elite Distance chr7:31947328-31949291
FOSL2FOXA1TCF12IKZF1SIN3ACTCFDPF2IKZF2GABPAZNF687BCL3FOSZBTB33RESTATF3EP300ARID3AATF7BHLHE40SP1HNF4AJUNDFOSL2HNF4GFOXA1CEBPBSMARCE1FOXA2NFATC3CEBPB
GH07J031950 - 7:31950876:G:A 1.0191 Enhancer - Distance chr7:31950693-31952008
NBNIKZF2IKZF1DPF2TBX21FOS
GH07J031953 - 7:31954032:C:T 1.0083 Enhancer - Distance chr7:31953883-31954714
FOXA1ZBTB40
GH07J031954 - 7:31955437:T:C 1.0123 Enhancer - Distance chr7:31954942-31955536
TCF12SP1FOXA1
GH07J031955 - 7:31955655:T:C 1.0149 Enhancer - Distance chr7:31955543-31956256
CREB1RFX5GABPATCF12SIN3ASP1
GH07J031958 - 7:31958478:C:T 0.0532 Enhancer Elite Distance chr7:31958328-31958478
TCF12SP1FOSL2FOXA1CEBPBFOSSTAT3
GH07J031960 - 7:31960317:A:G 0.2338 Enhancer - Distance chr7:31960026-31960504 -
GH07J031961 - 7:31962793:C:A 1.2866 Enhancer - Distance chr7:31961922-31963094 -
GH07J031963 - 7:31964173:G:A 0.2525 Enhancer - Distance chr7:31963629-31964287 -
GH07J031971 - 7:31971474:G:A 0.5863 Enhancer - Distance chr7:31971407-31972150
FOS
GH07J031974 - 7:31975317:T:C 0.4268 Enhancer - Distance chr7:31974806-31975596 -
GH07J031979 - 7:31979699:T:C 0.9866 Enhancer - Distance chr7:31979314-31981148
EP300ZFX
GH07J031981 - 7:31982171:G:A 0.8359 Enhancer - Distance chr7:31981725-31983045
ATF4
GH07J031983 - 7:31983623:AT:A 1.1220 Enhancer - Distance chr7:31983147-31984571 -
GH07J031986 - 7:31987437:G:A 0.5217 Enhancer Elite Distance chr7:31986461-31988355
ATF7GATA2FOSFOSL2JUNDRESTFOXA1TCF12YY1POLR2ACTCF
GH07J031989 - 7:31989796:T:C 0.1127 Enhancer - Distance chr7:31989480-31990286 -
GH07J031991 - 7:31992037:G:A 0.9067 Enhancer - Distance chr7:31991787-31992667
FOSGATA2
GH07J031995 - 7:31996580:G:A 0.0967 Enhancer - Distance chr7:31995969-31996598
SMARCA4
GH07J031997 - 7:31997622:C:T 0.6248 Enhancer - Distance chr7:31997271-31997889
CTCFEP300
GH07J031998 - 7:31999197:G:A 0.5042 Enhancer - Distance chr7:31998777-31999746 -
GH07J031999 - 7:32000754:T:C 1.3982 Enhancer - Distance chr7:31999896-32000826 -
GH07J032018 - 7:32019713:A:C 1.7161 Enhancer Elite eQTLs,Distance chr7:32018725-32020128
KDM1ACREMFOXA2HNF4AHNF4GFOXA1EP300ZNF384
GH07J032021 - 7:32020394:G:A 0.1673 Enhancer - Distance chr7:32020348-32020498 -
GH07J032020 - None 0.0000 Enhancer Elite Distance chr7:32020668-32020818
CEBPBEP300
GH07J032024 - 7:32025652:T:C 2.1253 Enhancer - eQTLs,Distance chr7:32024805-32026357 -
GH07J032031 - 7:32031533:C:G 2.4089 Enhancer - Distance chr7:32031287-32033448
EP300CEBPBSPI1MNTFOSJUND
GH07J032035 - 7:32035823:T:C 1.7904 Enhancer - eQTLs,Distance chr7:32035614-32036412 -
GH07J032038 - 7:32039811:T:C 2.0582 Enhancer - eQTLs,Distance chr7:32038813-32040172
FOSMAFKATF3SP1TCF12RESTNR3C1BCL3FOSL2FOXA1FOXA2JUNDCTCFGATA3CEBPBSREBF1YY1CTBP1MTA1FOXA1FOXA2SMC3MYCRAD21
GH07J032040 - 7:32040919:T:C 2.4122 Enhancer - eQTLs,Distance chr7:32040438-32041694 -
GH07J032043 - 7:32043563:C:A 0.2152 Enhancer Elite Distance chr7:32043421-32044168
CTCFYY1GATA3MTA2ZBTB33MAFKCTBP1SIN3ADPF2BHLHE40EP300GABPAFOSBCL3ATF3TCF12JUNDRCOR1ZHX2FOXA1RFX5NR3C1MTA1BCL11AESRRASP1JUNSMARCE1CREB1BATFFOSL2CUX1ATF7
GH07J032046 - 7:32047129:C:T 0.4909 Enhancer - eQTLs,Distance chr7:32046794-32047449
MEF2BIKZF1IKZF2TBX21EP300BMI1MTA2PKNOX1SPI1
GH07J032048 - 7:32054039:A:G 2.3061 Enhancer - eQTLs,Distance chr7:32048260-32055784
ZBTB33GATA3DPF2IKZF2ZNF687IKZF1ELF1ATF7TBX21ZNF217MEF2BMTA2BCL11APBX3BHLHE40ZNF316MAFFMAFKSMARCA4TRIM28ARNT
GH07J032055 - 7:32057146:G:A 2.0884 Enhancer - eQTLs,Distance chr7:32055891-32058715
EP300JUNDFOSSMARCA4
GH07J032059 - 7:32059816:T:G 0.4485 Enhancer Elite eQTLs,Distance chr7:32059246-32060680
TRIM28FOXA1
GH07J032060 - 7:32062389:C:T 2.4404 Enhancer - eQTLs,Distance chr7:32060948-32063235
CTCFCTBP1HCFC1ZNF444YY1SMC3RAD21NFIBXRCC5TRIM22NFICZNF143
GH07J032065 - 7:32067193:C:T 3.3525 Enhancer - eQTLs,Distance chr7:32065047-32068200
FOSBCL3
GH07J032068 - None 0.0000 Enhancer Elite Distance chr7:32068600-32068800 -
GH07J032069 - 7:32070503:C:G 3.4835 Promoter/Enhancer Elite eQTLs,Distance chr7:32069599-32071803
EZH2FOSL2PHF8BCL3SUZ12POLR2AASH2LYY1HDAC2RNF2CTCFTBPRBBP5MXI1SIN3ASMC3POLR2AEP300KDM4ARAD21YY1FOXA1CTCF
GH07J032073 - 7:32073886:A:T 3.1435 Enhancer - Distance chr7:32073378-32073976
KDM1AZMYM3RBM25CREB1
GH07J032075 - 7:32075376:A:G 0.3513 Enhancer Elite eQTLs,eRNA_co-expression,Distance chr7:32075324-32075496 -
GH07J032077 - 7:32078927:C:CA 0.7137 Enhancer - eQTLs,Distance chr7:32077643-32079022
MAFK
GH07J032079 - 7:32080338:T:G 3.0019 Enhancer - eQTLs,Distance chr7:32079095-32080655
CTCFTAL1CBFA2T3
GH07J032088 - 7:32088476:C:T 2.6257 Enhancer - eQTLs,Distance chr7:32088114-32090048
POLR2AFOSFOSZNF316CTCFMAFK
GH07J032090 - 7:32090255:T:C 2.6033 Enhancer - eQTLs,Distance chr7:32090091-32090719
CTCF
GH07J032093 - 7:32092558:C:T 1.1804 Enhancer Elite eQTLs,Distance chr7:32092068-32092581
RFX1JUND
GH07J032092 - 7:32094014:C:G 2.1295 Enhancer Elite eQTLs,Distance chr7:32092907-32094352
FOXA1FOSL2JUNDMAFKFOSNFE2L2TCF12SP1EP300STAT3CEBPBMYCGATA3FOXA1FOS
GH07J032095 - 7:32095586:A:G 0.1228 Enhancer - Distance chr7:32095128-32095641 -
GH07J032101 - 7:32102215:C:T 0.5812 Enhancer - Distance chr7:32101600-32103406
NFICNFIBPOLR2A
GH07J032108 - 7:32109461:T:C 0.4798 Enhancer - Distance chr7:32108473-32109474
MYCSTAT3FOS
GH07J032115 - 7:32115768:T:C 0.1782 Enhancer - Distance chr7:32115428-32116503
JUND
GH07J032142 - 7:32143913:A:AC 0.3085 Enhancer - Distance chr7:32142348-32144210
FOSL2JUNDCTCF
GH07J032161 - 7:32162516:G:C 0.9583 Enhancer Elite Distance chr7:32161080-32164898
CTCFJUNDCEBPBCTCFATF4TCF12ATF3CTCFJUNDSP1BHLHE40FOSGATA2MYCJUNSTAT3FOSL2RESTYY1RAD21JUNDFOSRESTCEBPBCTCFSIN3ARAD21ZNF579KDM1ASREBF1ZNF444ZNF217TRIM22ELF1PKNOX1ZNF143FOXA1SMARCA5SMC3RAD21SMARCE1GATA3
GH07J032204 - 7:32204449:A:G 0.9093 Enhancer Elite Distance chr7:32204194-32204758
JUNDTCF12SP1CTCFSMC3ZNF579RAD21ZNF217RESTGATA3YY1ZNF263SIN3ATRIM22ZNF444EP300RFX5MNTSMARCA5MYCZNF143
GH07J032224 - 7:32225023:A:T 0.5942 Enhancer - eRNA_co-expression,Distance chr7:32224906-32225284
MAFK
GH07J032250 - 7:32251118:A:G 1.3294 Enhancer - eRNA_co-expression,Distance chr7:32250908-32251148
SMARCA4EP300HNF4A
GH07J032293 - None 0.0000 Enhancer - Distance chr7:32293307-32293437 -
GH07J032297 - 7:32297831:C:T 0.3219 Enhancer - eRNA_co-expression,Distance chr7:32297786-32297900
CTCF
GH07J032336 - 7:32337431:A:G 1.6762 Enhancer - - chr7:32336212-32337457
CTCFFOS
GH07J032427 - None 0.0000 Enhancer - - chr7:32427788-32427938
EZH2RESTCTCFASH2LNRF1ZNF263SIN3AMIER1HNRNPLLXRCC5RBBP5HDAC2ZBTB40DEAF1FIP1L1EHMT2MLLT1AFF1HDAC1MNTSUZ12CBX3RCOR1ZKSCAN1GATA3CHAMP1MAXMYCZNF24BACH1HCFC1TBPBHLHE40EP300RAD21ZNF143YY1CREMTAF7GABPACBX5SMARCE1ZBTB33SAP30JUND
GH07J032428 - None 0.0000 Promoter - Distance chr7:32428020-32428080
EZH2RESTCTCFASH2LNRF1ZNF263SIN3AMIER1HNRNPLLXRCC5RBBP5HDAC2ZBTB40DEAF1FIP1L1EHMT2MLLT1AFF1HDAC1MNTSUZ12CBX3RCOR1ZKSCAN1CHAMP1MAXMYCZNF24BACH1HCFC1TBPBHLHE40EP300RAD21ZNF143YY1CREMTAF7GABPACBX5SMARCE1ZBTB33JUNDSMC3
GH07J032491 - 7:32491949:GGC:G 0.0036 Enhancer - eRNA_co-expression chr7:32491735-32492099
ZNF24NFXL1