GWAS Annotated: RBFOX1

Gene: RNA binding fox-1 homolog 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
RBFOX1GH16J005239-16:5239676:C:A0.7939Enhancer130-Distancechr16:5239063-5240929ENSR16_B3343, ENSR16_5389FX, ENSR16_9446B
CTCFNRF1SMC3RAD21MXI1ZNF143RNF2RB1TRIM22IKZF1BHLHE40SMARCA5GATAD2BREST
RBFOX1GH16J005252-16:5253202:T:A2.6021Enhancer36-Distancechr16:5252702-5253348--
RBFOX1GH16J005323-16:5323571:G:A0.0917Enhancer91-Distancechr16:5323179-5323874ENSR16_8684P
MAFKMAFFCREB1ESR1TCF12SIN3AMTA2RELBATF7TBX21DPF2CREB1IKZF1EP300
RBFOX1GH16J005429-16:5429167:T:G0.5016Enhancer82-Distancechr16:5428999-5429169ENSR16_9466W
CTCFSMC3RAD21
RBFOX1GH16J005450-16:5450816:A:G0.8295Enhancer36-Distancechr16:5450059-5451015ENSR16_946F5
ASH2LPOLR2AYY1SIN3ASP1EP300RAD21HDAC2JUNDKDM1ARBM25
RBFOX1GH16J005451-16:5452041:T:C0.9408Enhancer36-Distancechr16:5451621-5452409-
TCF12ZNF143YY1HDAC2NANOGSIN3A
RBFOX1GH16J005463-None0.0000Enhancer6-Distancechr16:5463868-5463938--
RBFOX1GH16J005504-None0.0000Enhancer82-Distancechr16:5504239-5504389-
RCOR1BCL3SREBF1RESTMXI1
RBFOX1GH16J005567-None0.0000Enhancer48-Distancechr16:5567632-5567653-
CREB1ATF2
RBFOX1GH16J005578-None0.0000Enhancer6-Distancechr16:5578528-5578814--
RBFOX1GH16J005616-16:5616129:G:C1.5861Enhancer237EliteDistancechr16:5616000-5616589ENSR16_86GD3, ENSR16_94875, ENSR16_53BN2D
CTCFGATAD2BPOLR2GCTBP1IKZF1ELF1GABPB1HNRNPLLELF4SMC3RAD21XRCC5KAT2BMXI1E2F6ZNF143TRIM22ZNF579RBFOX2GABPAMEIS2RB1SMARCA4RBBP5MYCKLF16YY1RCOR1SPI1PKNOX1ZNF444FOXA1RESTGATA3PCBP1HNRNPKZNF263ZNF217PCBP2ASH2LEGR1
RBFOX1GH16J005668-16:5668686:A:G2.5857Enhancer91-Distancechr16:5668679-5668809-
ATF3SOX6PKNOX1ATF2MEIS2JUNDATF7
RBFOX1GH16J005738-None0.0000Enhancer71-Distancechr16:5738699-5738849-
CTBP1ELF1FOXA2CUX1JUNDGATA3ESR1FOXA1SMARCE1
RBFOX1GH16J005741-16:5741333:A:G2.0608Enhancer56-Distancechr16:5741185-5742172-
CREB1CEBPBHNRNPK
RBFOX1GH16J005871-16:5870510:G:T1.0474Enhancer19-eRNA_co-expression,Distancechr16:5870370-5870633--
RBFOX1GH16J005870-16:5871612:G:A0.9752Enhancer36-Distancechr16:5870905-5872322-
EP300NANOGTCF12SMC3RAD21
RBFOX1GH16J005885-None0.0000Enhancer6-Distancechr16:5885457-5885792--
RBFOX1GH16J005916-16:5916990:A:G0.3611Enhancer1-Distancechr16:5916879-5917029ENSR16_86NS4
EZH2
RBFOX1GH16J005918-None0.0000Enhancer82-Distancechr16:5918879-5919049ENSR16_94CFM, ENSR16_53DKWN
CTCFYY1ZNF143TCF12RESTSMC3RAD21
RBFOX1GH16J005925-16:5926032:T:C0.4256Enhancer36-Distancechr16:5925979-5926149-
NANOG
RBFOX1GH16J005928-None0.0000Enhancer36-Distancechr16:5928779-5928929ENSR16_94CJH
SIN3AYY1CHD7SP1EP300
RBFOX1GH16J006019-None0.0000Promoter164-Distancechr16:6019031-6019091RBFOX1_2
SUZ12CTCFKDM4AEZH2EP300MXI1RAD21
RBFOX1GH16J006020-None0.0000Enhancer9-eRNA_co-expression,Distancechr16:6020689-6020771-
EZH2
RBFOX1GH16J006055-16:6055990:G:A0.7989Enhancer6-eRNA_co-expression,Distancechr16:6055782-6056156--
RBFOX1GH16J006081-None0.0000Enhancer117-Distancechr16:6081479-6081609ENSR16_86SCF, ENSR16_53FLR9
CTCFZNF444RAD21RESTSMC3TRIM22RFX5ZNF143SPI1SMARCA4DACH1
RBFOX1GH16J006142-16:6142411:T:C0.2023Enhancer9-Distancechr16:6142186-6142509--
RBFOX1GH16J006147-None0.0000Enhancer71-Distancechr16:6147139-6147289ENSR16_53G33G
CTCFZNF143RAD21
RBFOX1GH16J006186-16:6187042:A:G0.3672Enhancer6-eRNA_co-expression,Distancechr16:6186733-6187086--
RBFOX1GH16J006193-16:6193860:T:C0.2293Enhancer91-Distancechr16:6193859-6194029ENSR16_86WQG
EZH2RESTEHMT2JUNDATF3YY1ZNF143MIER1
RBFOX1GH16J006195-16:6196410:A:G0.0852Enhancer82-Distancechr16:6195665-6196702-
KDM1AHDAC2CHD7YY1SP1NANOGEP300RESTRAD21SRF
RBFOX1GH16J006215-16:6215679:C:G0.0277Enhancer15-eRNA_co-expression,Distancechr16:6215508-6215834-
HNRNPK
RBFOX1GH16J006231-16:6231831:GTTTTT:G1.2522Enhancer9-eRNA_co-expression,Distancechr16:6231505-6231856--
RBFOX1GH16J006248-16:6248671:A:C1.2420Enhancer6--chr16:6248655-6248856--
RBFOX1GH16J006297-16:6298240:G:A0.9413Enhancer56--chr16:6297935-6298725-
CTCFNANOG
RBFOX1GH16J006303-None0.0000Enhancer17--chr16:6303431-6303831--
RBFOX1GH16J006317-16:6318365:G:C0.5617Enhancer1--chr16:6317657-6318744-
MAFF
RBFOX1GH16J006341-16:6341873:G:A1.9704Enhancer82--chr16:6341559-6344166-
ZNF316MAFKNANOGHDAC2YY1EP300HDAC2CHD7NANOGBCL11A
RBFOX1GH16J006345-16:6345880:A:G1.3215Enhancer1--chr16:6345879-6346029-
ASH2L
RBFOX1GH16J006365-16:6365589:A:G0.2362Enhancer51--chr16:6365497-6365991--
RBFOX1GH16J006370-16:6370470:G:C1.0370Enhancer11--chr16:6370459-6370697--
RBFOX1GH16J006372-16:6373262:A:G0.6877Enhancer65--chr16:6372298-6373401-
CTCF
RBFOX1GH16J006373-16:6374154:G:C1.3924Enhancer6--chr16:6373891-6374233--
RBFOX1GH16J006431-None0.0000Enhancer6--chr16:6431635-6431867-
RBM25
RBFOX1GH16J006483-None0.0000Promoter149-Physical Overlap (TSS)chr16:6483708-6483768ENSR16_875Z6, RBFOX1_4
SUZ12KDM4AEZH2ASH2LSIN3ATBPRESTGABPA
RBFOX1GH16J006484-None0.0000Enhancer56--chr16:6483779-6483889ENSR16_875Z6, ENSR16_7D9XH
SUZ12KDM4AEZH2ASH2LSIN3ATBPRESTGABPA
RBFOX1GH16J006498-16:6499046:C:G1.1692Enhancer82--chr16:6498839-6500063-
CEBPBBHLHE40BMI1MTA2ARNTIKZF1TCF12ATF2ATF7JUNDDPF2
RBFOX1GH16J006506-16:6506584:A:C0.6597Enhancer17--chr16:6506525-6506947--
RBFOX1GH16J006507-16:6507641:A:G1.5332Enhancer9--chr16:6507503-6507852--
RBFOX1GH16J006514-16:6515325:A:C0.0986Enhancer6--chr16:6514959-6515348--
RBFOX1GH16J006559-None0.0000Enhancer56--chr16:6558179-6558369ENSR16_877KB
ASH2LCHD1TCF12TAF1SP1CHD7EP300NANOGRBBP5POLR2A
RBFOX1GH16J006558-16:6558597:C:G0.6942Enhancer56--chr16:6558374-6559091ENSR16_877KB
ASH2LCHD1TAF1SP1CHD7EP300NANOGRBBP5POLR2A
RBFOX1GH16J006565-None0.0000Enhancer9--chr16:6565125-6565136--
RBFOX1GH16J006573-16:6573773:T:C0.2243Enhancer56--chr16:6573739-6573869ENSR16_7DFRG, ENSR16_877WB, ENSR16_53JQ7F
CTCFCREB1SMC3RAD21RESTSMARCA4
RBFOX1GH16J006642-None0.0000Enhancer1--chr16:6642159-6642309--
RBFOX1GH16J006655-None0.0000Enhancer27--chr16:6655370-6655493--
RBFOX1GH16J006663-16:6663614:T:C0.2102Enhancer1--chr16:6663579-6663709--
RBFOX1GH16J006725-None0.0000Promoter149-Physical Overlap (TSS)chr16:6725968-6726028RBFOX1_1
CEBPBCTCFRAD21
RBFOX1GH16J006757-16:6757889:T:C0.4506Enhancer14--chr16:6757747-6758079-
KDM1A
RBFOX1GH16J006772-16:6772724:T:A0.3502Enhancer21--chr16:6772642-6773190-
RNF2
RBFOX1GH16J006827-16:6827442:G:GCAGT0.9799Enhancer1--chr16:6827359-6827509-
SP1SPI1EP300
RBFOX1GH16J006861-16:6861298:G:T0.1158Enhancer1--chr16:6861239-6861369-
CHD7HDAC2EP300JUNDTCF12NANOGSP1
RBFOX1GH16J006926-16:6926507:T:C0.3852Enhancer36--chr16:6926227-6927390ENSR16_87HGM
USF1EP300SP1YY1RAD21NANOG
RBFOX1GH16J006985-16:6985882:T:G0.1208Enhancer20--chr16:6985829-6985889--
RBFOX1GH16J007025-None0.0000Enhancer111--chr16:7025719-7025869ENSR16_94R9X, ENSR16_53MLNR
CTCFSMC3RAD21XRCC5ZNF444TRIM22YY1ZNF143REST
RBFOX1GH16J007037-16:7038241:C:G0.4440Enhancer71--chr16:7037184-7038335-
FOXA2SKIFOXA1BHLHE40SP1USF1
RBFOX1GH16J007058-16:7058169:A:G0.1692Enhancer15--chr16:7058002-7058305-
GATA3ZNF384
RBFOX1GH16J007086-16:7086993:G:A0.7029Enhancer99--chr16:7086578-7088043ENSR16_94RXM
RBBP5AGO1HNRNPLLCTCFRAD21SMC3MAFKYY1EP300ZNF143MAFKMAFFHNRNPK
RBFOX1GH16J007089-16:7090008:T:C0.8397Enhancer1--chr16:7089556-7090510--
RBFOX1GH16J007090-None0.0000Enhancer1--chr16:7090819-7090969--
RBFOX1GH16J007096-16:7096268:G:A1.0562Enhancer6--chr16:7096094-7096325--
RBFOX1GH16J007120-16:7120958:T:C0.1656Enhancer29--chr16:7120844-7121391--
RBFOX1GH16J007182-None0.0000Enhancer111--chr16:7182659-7182789ENSR16_87NXN
RESTAFF1SIN3AEHMT2BACH1ZNF143GATA3MAFKMIER1NFE2
RBFOX1GH16J007191-16:7191544:A:G0.7443Enhancer63--chr16:7191447-7191662--
RBFOX1GH16J007228-None0.0000Enhancer56--chr16:7227139-7227469ENSR16_94TGB
MNTASH2LMYCSP1RBBP5POLR2AHDAC2TAF1RAD21EP300
RBFOX1GH16J007227-None0.0000Enhancer56--chr16:7227499-7227689ENSR16_94TGB
ASH2LSP1RBBP5POLR2AHDAC2TAF1RAD21EP300TCF12BACH1
RBFOX1GH16J007263-16:7263996:C:G0.9722Enhancer11--chr16:7263967-7264043--
RBFOX1GH16J007303-None0.0000Enhancer56--chr16:7303379-7303489ENSR16_94W99
EZH2RBBP5SIN3AKDM4ACTCFRAD21
RBFOX1GH16J007306-None0.0000Enhancer1--chr16:7303879-7303929ENSR16_94W9F
EZH2SP1YY1ZNF143EGR1KDM4A
RBFOX1GH16J007304-None0.0000Enhancer1--chr16:7303999-7304029ENSR16_94W9F
EZH2SP1KDM4AASH2LYY1
RBFOX1GH16J007307-16:7304888:A:G0.3058Enhancer74--chr16:7304525-7305048-
EZH2ASH2LKDM4A
RBFOX1GH16J007305-16:7305257:C:T0.2949Enhancer46--chr16:7305049-7305693--
RBFOX1GH16J007324-None0.0000Enhancer1--chr16:7324399-7324549--
RBFOX1GH16J007325-16:7326074:T:C0.2337Enhancer99--chr16:7325130-7327123-
RFX1KDM1ARBM25POLR2ACREB1C11orf30ZNF316MAFKMAFFJUNDCTCFNFE2
RBFOX1GH16J007328-16:7329225:G:A0.6484Enhancer1--chr16:7328975-7329572-
EZH2
RBFOX1GH16J007330-16:7330524:G:A1.5572Promoter/Enhancer517Elite-chr16:7330339-7336365ENSR16_94WK8, ENSR16_87S6H, ENSR16_87S6L, ENSR16_87S7W, RBFOX1_3
POLR2APOLR2AMAFKPOLR2ATBX3MAFKC11orf30CREB1ZNF316RFX5BACH1MAFFNFE2L2NFE2
RBFOX1GH16J007336-16:7337343:C:G0.0638Enhancer1--chr16:7336800-7337812--
RBFOX1GH16J007338-16:7338999:C:T0.0767Enhancer98Elite-chr16:7338859-7339009-
POLR2AGATA3
RBFOX1GH16J007340-16:7341011:C:T0.8192Enhancer71--chr16:7340782-7341707-
CREB1ATF7CREB1PCBP2ATF2
RBFOX1GH16J007342-16:7343021:C:T0.7815Enhancer1--chr16:7342485-7344226ENSR16_94WNS
PKNOX1
RBFOX1GH16J007345-None0.0000Enhancer118Elite-chr16:7345459-7345609-
RCOR1GATA2RAD21CTCF
RBFOX1GH16J007346-16:7346322:C:T0.3744Enhancer1--chr16:7346173-7346910--
RBFOX1GH16J007347-16:7347668:T:C0.1078Enhancer1--chr16:7347188-7347948--
RBFOX1GH16J007348-16:7349529:C:CT0.0853Enhancer1--chr16:7348920-7349572--
RBFOX1GH16J007349-16:7352353:C:G0.1822Enhancer98Elite-chr16:7349956-7352926ENSR16_94WR8
MAFK
RBFOX1GH16J007360-16:7361769:G:A0.2823Enhancer117--chr16:7360193-7361878-
TBX3CTBP1NCOA3ZNF444LCORLZNF687TRIM22PHB2FOSCREB1E4F1ZBTB33SP1CTCF
RBFOX1GH16J007362-16:7364404:C:G1.0174Enhancer167Elite-chr16:7362868-7364953ENSR16_B3GGC
MXI1RCOR1RAD21YY1EP300
RBFOX1GH16J007365-16:7367202:A:G0.4531Enhancer1--chr16:7365332-7367731-
GATA2
RBFOX1GH16J007368-16:7369120:C:G0.0402Enhancer187Elite-chr16:7368978-7369829--
RBFOX1GH16J007371-16:7374391:G:A2.0706Enhancer56--chr16:7371612-7375373-
MAFKGATA3RCOR1GATA2
RBFOX1GH16J007376-16:7377024:G:A0.9673Enhancer121--chr16:7376211-7379243-
FOXA2GATA3ARID1BGATA2NR2F6RCOR1NR2F2TEAD4TCF12CBFA2T2TAL1CBFA2T3NR2F1EP300FOSJUNDGABPB1RCOR1CREB1
RBFOX1GH16J007379-16:7379840:C:T0.1536Enhancer1--chr16:7379506-7380214--
RBFOX1GH16J007380-16:7380940:A:G0.1336Enhancer1--chr16:7380514-7380987--
RBFOX1GH16J007381-16:7382480:G:T0.1285Enhancer1--chr16:7381986-7383155--
RBFOX1GH16J007389-16:7392493:C:T2.1446Enhancer56--chr16:7389754-7392915-
CTCFPOLR2AMAFKMAFFFOXA1
RBFOX1GH16J007397-16:7397568:A:G0.9595Enhancer1--chr16:7397245-7399059ENSR16_94X9M-
RBFOX1GH16J007405-16:7405334:C:T1.0637Enhancer153Elite-chr16:7405319-7405469ENSR16_94XCQ, ENSR16_53Q2R9
CTCFRAD21SMC3GATA3ZNF143MAFK
RBFOX1GH16J007423-None0.0000Enhancer14--chr16:7423617-7423765--
RBFOX1GH16J007440-16:7441639:T:C0.4497Enhancer1--chr16:7440702-7441857-
NRF1C11orf30MAFKNFE2
RBFOX1GH16J007442-16:7442514:A:G1.2641Enhancer63--chr16:7442500-7442712--
RBFOX1GH16J007538-16:7538960:T:C0.5675Enhancer9--chr16:7538839-7539118--
RBFOX1GH16J007597-16:7597751:G:A1.1128Enhancer36--chr16:7597283-7598287--
RBFOX1GH16J007600-16:7600966:T:C0.5937Enhancer36--chr16:7600873-7601928-
ATF2RAD21CTCF
RBFOX1GH16J007650-16:7650275:A:G1.1544Enhancer56--chr16:7650161-7650331-
PCBP2HNRNPK
RBFOX1GH16J007651-16:7652064:A:T0.4137Enhancer1--chr16:7651918-7652068-
ASH2L
RBFOX1GH16J007708-16:7709204:G:T1.8195Enhancer125Elite-chr16:7708522-7709861-
HNRNPK
RBFOX1GH16J007711-16:7711734:G:T1.7307Enhancer63--chr16:7711575-7711898--