GWAS Annotated Elements: RBFOX1

Gene: RNA binding fox-1 homolog 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH16J005239 - 16:5239676:C:A 0.7939 Enhancer - Distance chr16:5239063-5240929
CTCFNRF1SMC3RAD21MXI1ZNF143RNF2RB1TRIM22IKZF1BHLHE40SMARCA5GATAD2BREST
GH16J005252 - 16:5253202:T:A 2.6021 Enhancer - Distance chr16:5252702-5253348 -
GH16J005323 - 16:5323571:G:A 0.0917 Enhancer - Distance chr16:5323179-5323874
MAFKMAFFCREB1ESR1TCF12SIN3AMTA2RELBATF7TBX21DPF2CREB1IKZF1EP300
GH16J005429 - 16:5429167:T:G 0.5016 Enhancer - Distance chr16:5428999-5429169
CTCFSMC3RAD21
GH16J005450 - 16:5450816:A:G 0.8295 Enhancer - Distance chr16:5450059-5451015
ASH2LPOLR2AYY1SIN3ASP1EP300RAD21HDAC2JUNDKDM1ARBM25
GH16J005451 - 16:5452041:T:C 0.9408 Enhancer - Distance chr16:5451621-5452409
TCF12ZNF143YY1HDAC2NANOGSIN3A
GH16J005463 - None 0.0000 Enhancer - Distance chr16:5463868-5463938 -
GH16J005504 - None 0.0000 Enhancer - Distance chr16:5504239-5504389
RCOR1BCL3SREBF1RESTMXI1
GH16J005567 - None 0.0000 Enhancer - Distance chr16:5567632-5567653
CREB1ATF2
GH16J005578 - None 0.0000 Enhancer - Distance chr16:5578528-5578814 -
GH16J005616 - 16:5616129:G:C 1.5861 Enhancer Elite Distance chr16:5616000-5616589
CTCFGATAD2BPOLR2GCTBP1IKZF1ELF1GABPB1HNRNPLLELF4SMC3RAD21XRCC5KAT2BMXI1E2F6ZNF143TRIM22ZNF579RBFOX2GABPAMEIS2RB1SMARCA4RBBP5MYCKLF16YY1RCOR1SPI1PKNOX1ZNF444FOXA1RESTGATA3PCBP1HNRNPKZNF263ZNF217PCBP2ASH2LEGR1
GH16J005668 - 16:5668686:A:G 2.5857 Enhancer - Distance chr16:5668679-5668809
ATF3SOX6PKNOX1ATF2MEIS2JUNDATF7
GH16J005738 - None 0.0000 Enhancer - Distance chr16:5738699-5738849
CTBP1ELF1FOXA2CUX1JUNDGATA3ESR1FOXA1SMARCE1
GH16J005741 - 16:5741333:A:G 2.0608 Enhancer - Distance chr16:5741185-5742172
CREB1CEBPBHNRNPK
GH16J005871 - 16:5870510:G:T 1.0474 Enhancer - eRNA_co-expression,Distance chr16:5870370-5870633 -
GH16J005870 - 16:5871612:G:A 0.9752 Enhancer - Distance chr16:5870905-5872322
EP300NANOGTCF12SMC3RAD21
GH16J005885 - None 0.0000 Enhancer - Distance chr16:5885457-5885792 -
GH16J005916 - 16:5916990:A:G 0.3611 Enhancer - Distance chr16:5916879-5917029
EZH2
GH16J005918 - None 0.0000 Enhancer - Distance chr16:5918879-5919049
CTCFYY1ZNF143TCF12RESTSMC3RAD21
GH16J005925 - 16:5926032:T:C 0.4256 Enhancer - Distance chr16:5925979-5926149
NANOG
GH16J005928 - None 0.0000 Enhancer - Distance chr16:5928779-5928929
SIN3AYY1CHD7SP1EP300
GH16J006019 - None 0.0000 Promoter - Distance chr16:6019031-6019091
SUZ12CTCFKDM4AEZH2EP300MXI1RAD21
GH16J006020 - None 0.0000 Enhancer - eRNA_co-expression,Distance chr16:6020689-6020771
EZH2
GH16J006055 - 16:6055990:G:A 0.7989 Enhancer - eRNA_co-expression,Distance chr16:6055782-6056156 -
GH16J006081 - None 0.0000 Enhancer - Distance chr16:6081479-6081609
CTCFZNF444RAD21RESTSMC3TRIM22RFX5ZNF143SPI1SMARCA4DACH1
GH16J006142 - 16:6142411:T:C 0.2023 Enhancer - Distance chr16:6142186-6142509 -
GH16J006147 - None 0.0000 Enhancer - Distance chr16:6147139-6147289
CTCFZNF143RAD21
GH16J006186 - 16:6187042:A:G 0.3672 Enhancer - eRNA_co-expression,Distance chr16:6186733-6187086 -
GH16J006193 - 16:6193860:T:C 0.2293 Enhancer - Distance chr16:6193859-6194029
EZH2RESTEHMT2JUNDATF3YY1ZNF143MIER1
GH16J006195 - 16:6196410:A:G 0.0852 Enhancer - Distance chr16:6195665-6196702
KDM1AHDAC2CHD7YY1SP1NANOGEP300RESTRAD21SRF
GH16J006215 - 16:6215679:C:G 0.0277 Enhancer - eRNA_co-expression,Distance chr16:6215508-6215834
HNRNPK
GH16J006231 - 16:6231831:GTTTTT:G 1.2522 Enhancer - eRNA_co-expression,Distance chr16:6231505-6231856 -
GH16J006248 - 16:6248671:A:C 1.2420 Enhancer - - chr16:6248655-6248856 -
GH16J006297 - 16:6298240:G:A 0.9413 Enhancer - - chr16:6297935-6298725
CTCFNANOG
GH16J006303 - None 0.0000 Enhancer - - chr16:6303431-6303831 -
GH16J006317 - 16:6318365:G:C 0.5617 Enhancer - - chr16:6317657-6318744
MAFF
GH16J006341 - 16:6341873:G:A 1.9704 Enhancer - - chr16:6341559-6344166
ZNF316MAFKNANOGHDAC2YY1EP300HDAC2CHD7NANOGBCL11A
GH16J006345 - 16:6345880:A:G 1.3215 Enhancer - - chr16:6345879-6346029
ASH2L
GH16J006365 - 16:6365589:A:G 0.2362 Enhancer - - chr16:6365497-6365991 -
GH16J006370 - 16:6370470:G:C 1.0370 Enhancer - - chr16:6370459-6370697 -
GH16J006372 - 16:6373262:A:G 0.6877 Enhancer - - chr16:6372298-6373401
CTCF
GH16J006373 - 16:6374154:G:C 1.3924 Enhancer - - chr16:6373891-6374233 -
GH16J006431 - None 0.0000 Enhancer - - chr16:6431635-6431867
RBM25
GH16J006483 - None 0.0000 Promoter - Physical Overlap (TSS) chr16:6483708-6483768
SUZ12KDM4AEZH2ASH2LSIN3ATBPRESTGABPA
GH16J006484 - None 0.0000 Enhancer - - chr16:6483779-6483889
SUZ12KDM4AEZH2ASH2LSIN3ATBPRESTGABPA
GH16J006498 - 16:6499046:C:G 1.1692 Enhancer - - chr16:6498839-6500063
CEBPBBHLHE40BMI1MTA2ARNTIKZF1TCF12ATF2ATF7JUNDDPF2
GH16J006506 - 16:6506584:A:C 0.6597 Enhancer - - chr16:6506525-6506947 -
GH16J006507 - 16:6507641:A:G 1.5332 Enhancer - - chr16:6507503-6507852 -
GH16J006514 - 16:6515325:A:C 0.0986 Enhancer - - chr16:6514959-6515348 -
GH16J006559 - None 0.0000 Enhancer - - chr16:6558179-6558369
ASH2LCHD1TCF12TAF1SP1CHD7EP300NANOGRBBP5POLR2A
GH16J006558 - 16:6558597:C:G 0.6942 Enhancer - - chr16:6558374-6559091
ASH2LCHD1TAF1SP1CHD7EP300NANOGRBBP5POLR2A
GH16J006565 - None 0.0000 Enhancer - - chr16:6565125-6565136 -
GH16J006573 - 16:6573773:T:C 0.2243 Enhancer - - chr16:6573739-6573869
CTCFCREB1SMC3RAD21RESTSMARCA4
GH16J006642 - None 0.0000 Enhancer - - chr16:6642159-6642309 -
GH16J006655 - None 0.0000 Enhancer - - chr16:6655370-6655493 -
GH16J006663 - 16:6663614:T:C 0.2102 Enhancer - - chr16:6663579-6663709 -
GH16J006725 - None 0.0000 Promoter - Physical Overlap (TSS) chr16:6725968-6726028
CEBPBCTCFRAD21
GH16J006757 - 16:6757889:T:C 0.4506 Enhancer - - chr16:6757747-6758079
KDM1A
GH16J006772 - 16:6772724:T:A 0.3502 Enhancer - - chr16:6772642-6773190
RNF2
GH16J006827 - 16:6827442:G:GCAGT 0.9799 Enhancer - - chr16:6827359-6827509
SP1SPI1EP300
GH16J006861 - 16:6861298:G:T 0.1158 Enhancer - - chr16:6861239-6861369
CHD7HDAC2EP300JUNDTCF12NANOGSP1
GH16J006926 - 16:6926507:T:C 0.3852 Enhancer - - chr16:6926227-6927390
USF1EP300SP1YY1RAD21NANOG
GH16J006985 - 16:6985882:T:G 0.1208 Enhancer - - chr16:6985829-6985889 -
GH16J007025 - None 0.0000 Enhancer - - chr16:7025719-7025869
CTCFSMC3RAD21XRCC5ZNF444TRIM22YY1ZNF143REST
GH16J007037 - 16:7038241:C:G 0.4440 Enhancer - - chr16:7037184-7038335
FOXA2SKIFOXA1BHLHE40SP1USF1
GH16J007058 - 16:7058169:A:G 0.1692 Enhancer - - chr16:7058002-7058305
GATA3ZNF384
GH16J007086 - 16:7086993:G:A 0.7029 Enhancer - - chr16:7086578-7088043
RBBP5AGO1HNRNPLLCTCFRAD21SMC3MAFKYY1EP300ZNF143MAFKMAFFHNRNPK
GH16J007089 - 16:7090008:T:C 0.8397 Enhancer - - chr16:7089556-7090510 -
GH16J007090 - None 0.0000 Enhancer - - chr16:7090819-7090969 -
GH16J007096 - 16:7096268:G:A 1.0562 Enhancer - - chr16:7096094-7096325 -
GH16J007120 - 16:7120958:T:C 0.1656 Enhancer - - chr16:7120844-7121391 -
GH16J007182 - None 0.0000 Enhancer - - chr16:7182659-7182789
RESTAFF1SIN3AEHMT2BACH1ZNF143GATA3MAFKMIER1NFE2
GH16J007191 - 16:7191544:A:G 0.7443 Enhancer - - chr16:7191447-7191662 -
GH16J007228 - None 0.0000 Enhancer - - chr16:7227139-7227469
MNTASH2LMYCSP1RBBP5POLR2AHDAC2TAF1RAD21EP300
GH16J007227 - None 0.0000 Enhancer - - chr16:7227499-7227689
ASH2LSP1RBBP5POLR2AHDAC2TAF1RAD21EP300TCF12BACH1
GH16J007263 - 16:7263996:C:G 0.9722 Enhancer - - chr16:7263967-7264043 -
GH16J007303 - None 0.0000 Enhancer - - chr16:7303379-7303489
EZH2RBBP5SIN3AKDM4ACTCFRAD21
GH16J007306 - None 0.0000 Enhancer - - chr16:7303879-7303929
EZH2SP1YY1ZNF143EGR1KDM4A
GH16J007304 - None 0.0000 Enhancer - - chr16:7303999-7304029
EZH2SP1KDM4AASH2LYY1
GH16J007307 - 16:7304888:A:G 0.3058 Enhancer - - chr16:7304525-7305048
EZH2ASH2LKDM4A
GH16J007305 - 16:7305257:C:T 0.2949 Enhancer - - chr16:7305049-7305693 -
GH16J007324 - None 0.0000 Enhancer - - chr16:7324399-7324549 -
GH16J007325 - 16:7326074:T:C 0.2337 Enhancer - - chr16:7325130-7327123
RFX1KDM1ARBM25POLR2ACREB1C11orf30ZNF316MAFKMAFFJUNDCTCFNFE2
GH16J007328 - 16:7329225:G:A 0.6484 Enhancer - - chr16:7328975-7329572
EZH2
GH16J007330 - 16:7330524:G:A 1.5572 Promoter/Enhancer Elite - chr16:7330339-7336365
POLR2APOLR2AMAFKPOLR2ATBX3MAFKC11orf30CREB1ZNF316RFX5BACH1MAFFNFE2L2NFE2
GH16J007336 - 16:7337343:C:G 0.0638 Enhancer - - chr16:7336800-7337812 -
GH16J007338 - 16:7338999:C:T 0.0767 Enhancer Elite - chr16:7338859-7339009
POLR2AGATA3
GH16J007340 - 16:7341011:C:T 0.8192 Enhancer - - chr16:7340782-7341707
CREB1ATF7CREB1PCBP2ATF2
GH16J007342 - 16:7343021:C:T 0.7815 Enhancer - - chr16:7342485-7344226
PKNOX1
GH16J007345 - None 0.0000 Enhancer Elite - chr16:7345459-7345609
RCOR1GATA2RAD21CTCF
GH16J007346 - 16:7346322:C:T 0.3744 Enhancer - - chr16:7346173-7346910 -
GH16J007347 - 16:7347668:T:C 0.1078 Enhancer - - chr16:7347188-7347948 -
GH16J007348 - 16:7349529:C:CT 0.0853 Enhancer - - chr16:7348920-7349572 -
GH16J007349 - 16:7352353:C:G 0.1822 Enhancer Elite - chr16:7349956-7352926
MAFK
GH16J007360 - 16:7361769:G:A 0.2823 Enhancer - - chr16:7360193-7361878
TBX3CTBP1NCOA3ZNF444LCORLZNF687TRIM22PHB2FOSCREB1E4F1ZBTB33SP1CTCF
GH16J007362 - 16:7364404:C:G 1.0174 Enhancer Elite - chr16:7362868-7364953
MXI1RCOR1RAD21YY1EP300
GH16J007365 - 16:7367202:A:G 0.4531 Enhancer - - chr16:7365332-7367731
GATA2
GH16J007368 - 16:7369120:C:G 0.0402 Enhancer Elite - chr16:7368978-7369829 -
GH16J007371 - 16:7374391:G:A 2.0706 Enhancer - - chr16:7371612-7375373
MAFKGATA3RCOR1GATA2
GH16J007376 - 16:7377024:G:A 0.9673 Enhancer - - chr16:7376211-7379243
FOXA2GATA3ARID1BGATA2NR2F6RCOR1NR2F2TEAD4TCF12CBFA2T2TAL1CBFA2T3NR2F1EP300FOSJUNDGABPB1RCOR1CREB1
GH16J007379 - 16:7379840:C:T 0.1536 Enhancer - - chr16:7379506-7380214 -
GH16J007380 - 16:7380940:A:G 0.1336 Enhancer - - chr16:7380514-7380987 -
GH16J007381 - 16:7382480:G:T 0.1285 Enhancer - - chr16:7381986-7383155 -
GH16J007389 - 16:7392493:C:T 2.1446 Enhancer - - chr16:7389754-7392915
CTCFPOLR2AMAFKMAFFFOXA1
GH16J007397 - 16:7397568:A:G 0.9595 Enhancer - - chr16:7397245-7399059 -
GH16J007405 - 16:7405334:C:T 1.0637 Enhancer Elite - chr16:7405319-7405469
CTCFRAD21SMC3GATA3ZNF143MAFK
GH16J007423 - None 0.0000 Enhancer - - chr16:7423617-7423765 -
GH16J007440 - 16:7441639:T:C 0.4497 Enhancer - - chr16:7440702-7441857
NRF1C11orf30MAFKNFE2
GH16J007442 - 16:7442514:A:G 1.2641 Enhancer - - chr16:7442500-7442712 -
GH16J007538 - 16:7538960:T:C 0.5675 Enhancer - - chr16:7538839-7539118 -
GH16J007597 - 16:7597751:G:A 1.1128 Enhancer - - chr16:7597283-7598287 -
GH16J007600 - 16:7600966:T:C 0.5937 Enhancer - - chr16:7600873-7601928
ATF2RAD21CTCF
GH16J007650 - 16:7650275:A:G 1.1544 Enhancer - - chr16:7650161-7650331
PCBP2HNRNPK
GH16J007651 - 16:7652064:A:T 0.4137 Enhancer - - chr16:7651918-7652068
ASH2L
GH16J007708 - 16:7709204:G:T 1.8195 Enhancer Elite - chr16:7708522-7709861
HNRNPK
GH16J007711 - 16:7711734:G:T 1.7307 Enhancer - - chr16:7711575-7711898 -