GWAS Annotated: SAMD5

Gene: sterile alpha motif domain containing 5

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
SAMD5GH06J147438-None0.0000Enhancer111-C-HiCchr6:147438678-147439746ENSR6_B3492W
RBBP5IKZF2NFATC3MTA2ATF7BHLHE40EGR1TBX21BCL11ABATFEP300ZFP91TCF12NANOGSIX5JUNDSP1HDAC2CHD7
SAMD5GH06J147447-6:147448403:T:G0.3679Enhancer160-C-HiCchr6:147447658-147448926ENSR6_946J6G
CEBPBCHD7ZNF592EP400GABPB1PRDM10HDAC1MYCMNTNANOGPOLR2AEGR1PKNOX1BHLHE40L3MBTL2MAXEP300MGAUSF1CTCFBACH1E2F6E2F1NFATC3ZEB2ATF2SMAD5CREM
SAMD5GH06J147453-6:147453293:A:G0.3971Enhancer91-C-HiC,Distancechr6:147453293-147454134-
SMARCE1HDAC1SMARCA4MTA1DPF2SOX6CBFA2T3ARID1BTAL1PRDM10USF1
SAMD5GH06J147506-6:147506744:T:C1.1058Promoter/Enhancer337EliteDistancechr6:147506744-147507001ENSR6_CJM7D, ENSR6_539NQMR
CTCFRAD51RAD21SMC3CTBP1RBM39HNRNPLLMXI1XRCC5SKILZNF263L3MBTL2CC2D1AYY1KLF16MAXIRF1ARID2MYCCREMSMARCA4RESTJUNSAFBZNF143RB1SUZ12EZH2
SAMD5GH06J147507-6:147508548:C:T1.1031Promoter/Enhancer501EliteeQTLs,eRNA_co-expression,Distancechr6:147507265-147511524ENSR6_CJM7D, ENSR6_B349DT, ENSR6_539NR42, ENSR6_539NR6C, ENSR6_86C4ML
CTCFRBM39HNRNPLLSUZ12EZH2EGR1E2F6TAF1MXI1GABPB1L3MBTL2GMEB1KDM5BPCBP1CTCFZBTB40RAD21KDM4APHF8SMC3SIN3ASAFBPOLR2ANRF1HDAC1BACH1RBBP5HDAC6E2F6ZNF263GATAD2BRB1CTBP1HNRNPLLFOXM1ZBTB7AASH2LEGR1YY1MEIS2RESTEP300GABPAL3MBTL2MXI1ZFXCTCFHNRNPLLGATAD2BKDM5BGATA2EGR1MXI1MAXYY1GABPAATF3RAD21SP1TAF1FOXA2MITFZBTB33CBFA2T3FOXA1POLR2AJUNDMYCEGR1RXRARESTHNF4AEP300POLR2ARAD21C11orf30ZNF316YY1MAFFCREB1NFE2HNF4AGABPAMAXFOXA1EGR1SP1RXRAFOXA2ZBTB40
SAMD5GH06J147558-6:147559865:A:C1.1749Enhancer36-eQTLs,Distancechr6:147558233-147560030ENSR6_946KCH-
SAMD5GH06J147620-6:147620987:TGTGCGC:T0.4797Enhancer105-eQTLs,Distancechr6:147620922-147621845ENSR6_B34B29
TAF1ATF2CEBPBATF4CTBP1FOSNR2F6MAFKNR2F1JUNDMEIS2ATF3PKNOX1
SAMD5GH06J147642-6:147642909:C:G1.2093Enhancer99-eQTLs,Distancechr6:147642281-147643001ENSR6_946L8M
RNF2
SAMD5GH06J147651-6:147652062:A:G0.7800Enhancer153EliteeQTLs,Distancechr6:147651096-147652299ENSR6_B34B6L
RXRASP1EP300NR2F2RESTCTCFJUNDRAD21TAF1FOS
SAMD5GH06J147660-6:147660659:CGATCTG:C0.0266Promoter/Enhancer367EliteDistancechr6:147660584-147660734SASH1_3
BRD4PHF8EHMT2ARNTPHF20GMEB1ZNF24NRF1HMBOX1SP1FOXM1DPF2IRF1GABPB1NCOA1CBX1BCORYY1ZBTB7ACTBP1ZHX1CHAMP1FOXK2MYBL2POLR2ANCOR1NFATC3NFICRNF2BRCA1TBPPOLR2GZNF592E4F1SOX6MXI1ATF7PMLRBFOX2EGR1MAFFCREB3L1E2F6CC2D1AARID1BE2F1ZNF184MBD2CTCFMNTMYCMAXELF4SMARCA4ARHGAP35AFF1RBM25TBL1XR1PYGO2ZNF282ZSCAN29HDAC1TAL1ZBTB40C11orf30SMAD1ZBTB33CBX3HDAC3EP400SMAD5NCOA6NBNLEF1SMARCC2TRIM24ZNF407BRD9MLLT1TAF9BPKNOX1MGAZBTB11GABPAL3MBTL2
SAMD5GH06J147663-None0.0000Enhancer6-Distancechr6:147663881-147663922--
SAMD5GH06J147675-6:147675386:A:C0.2325Enhancer56-Distancechr6:147675304-147675494ENSR6_946LL6
ATF7ATF2
SAMD5GH06J147699-6:147700008:A:C0.5638Enhancer71-Distancechr6:147699904-147700054ENSR6_946LT7
ATF3FOSJUNDGATA2
SAMD5GH06J147706-6:147707760:T:C0.1952Enhancer105-Distancechr6:147706894-147708779-
ZNF592FOXA2CBFA2T2CBFA2T3JUNDMEIS2
SAMD5GH06J147709-6:147710291:C:G0.1422Enhancer219-Distancechr6:147709220-147710307ENSR6_B34BH3
ZNF830XRCC3TRIM28PRDM10ZNF592MNTMYBL2TAF9BHDAC1NCOA2NR2F1ATF7GMEB1HMBOX1GATA2FOSHDAC3RNF2FOXK2NFICETV6HDAC2JUNBGATA1ARID1BSMARCC2CHAMP1GATAD2AKDM1AGATAD2BGABPB1IKZF1ZBTB2ATF3CBX3DPF2IRF1MBD2AFF1NFATC3CBFA2T3PYGO2TRIM24NR2F2CC2D1AMYCSMARCA4ZEB2MTA1TCF7MAFFSMARCE1FOXM1SOX6MITFJUNTCF12NCOA1LEF1FOSL1KLF16ARID3ACTBP1MTA2BHLHE40CREMRCOR1CBFA2T2JUNDTBL1XR1FOXA1STAT2HES1MAXDACH1NCOR1MXI1TEAD4NFE2TAL1EP300STAT5AZNF24BCORZNF184PKNOX1SMARCA5ZMYM3RBM25MAX
SAMD5GH06J147873-6:147874317:G:A0.8213Enhancer1-eQTLschr6:147873978-147874825-
FOSCTCF
SAMD5GH06J148324-6:148323844:T:C1.3836Enhancer180EliteeQTLschr6:148323656-148325583ENSR6_946TJP, ENSR6_B34FR2
FOSJUNDMAFKCEBPBFOSSMARCA4FOXP1