GWAS Annotated: SEZ6L

Gene: seizure related 6 homolog like

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
SEZ6LGH22J026055-None0.0000Enhancer1-C-HiCchr22:26055314-26055464--
SEZ6LGH22J026125-None0.0000Enhancer1-C-HiCchr22:26125114-26125264-
YY1EP300
SEZ6LGH22J026168-None0.0000Enhancer56-Distancechr22:26168714-26168844ENSR22_9DDG3
ASH2LSUZ12RBBP5EZH2SP1
SEZ6LGH22J026169-22:26169720:C:A0.1259Promoter/Enhancer415EliteDistancechr22:26169199-26169801ENSR22_9DDG3, ENSR22_9DDG7, ENSR22_58678S, SEZ6L_1, SEZ6L_2
ASH2LSUZ12EZH2RESTEP300MXI1ZNF263KDM4APOLR2ASMC3SPI1CTCFREST
SEZ6LGH22J026196-None0.0000Enhancer183-C-HiC,Distancechr22:26196774-26196924-
EHMT2CREMNCOR1FOXA2PKNOX1RXRAARID3AHNF4GHNF4AFOXA1SKITCF7TFAP4EP300RFX1FOXK2ETS1FOXP1KDM1ASOX13MAFFCEBPBMAFKSP1
SEZ6LGH22J026233-22:26234489:C:T0.6301Enhancer56-C-HiC,Distancechr22:26233861-26235364--
SEZ6LGH22J026294-22:26294595:T:C1.3899Enhancer237EliteC-HiC,Distancechr22:26294142-26295430-
HMBOX1EBF1SMARCA5JUNDIKZF1MTA2SIN3AATF2IKZF2ARID3ABHLHE40NFATC3SKILSRFSOX6RAD51ETV6RELBJUNBIRF4CREMZNF318NBNATF7GABPAELF1MEF2BMLLT1TBX21E4F1FOXK2PKNOX1BATFTRIM22IRF5BMI1
SEZ6LGH22J026321-22:26323043:G:A1.4370Enhancer213EliteDistancechr22:26321205-26323365ENSR22_B7835, ENSR22_B7838
KDM1ARBM25ZMYM3NRF1CTCFEP300DPF2ATF3ZKSCAN1BHLHE40BACH1FOSMAFKJUNDMAFFC11orf30NFE2L2ZNF316NFE2BCORZMYM3MYCFOSCEBPB
SEZ6LGH22J026331-22:26331163:C:T1.8775Enhancer158-C-HiC,Distancechr22:26331094-26331244ENSR22_9DG6Z, ENSR22_5877XN
CTCFSMC3RAD21ZEB1ZNF143BHLHE40EP300RCOR1TRIM22MYCSP1IRF4USF1YY1SPI1RB1POU2F2TCF12RFX5RESTCEBPB
SEZ6LGH22J026360-22:26360883:G:GA0.3453Enhancer228EliteC-HiC,Distancechr22:26360200-26361000ENSR22_B788P, ENSR22_587DZQ
CTCFTRIM28SMC3RAD21ATF7TRIM22ZNF143XRCC5RESTCREMPOLR2AIKZF1CREB1E2F1SIN3AEEDEBF1TAF1RB1MAXSP1ZBTB7ATBPBHLHE40L3MBTL2EGR1E2F6NFRKBEHMT2SPI1
SEZ6LGH22J026364-None0.0000Enhancer121-Distancechr22:26364534-26364704ENSR22_B789B, ENSR22_587FNF
RESTCHD7ASH2LCTCFMXI1XRCC5TBPRAD21TRIM22SMC3ZNF143YY1SMARCA4RFX5NR3C1RFX1
SEZ6LGH22J026367-None0.0000Enhancer137-Distancechr22:26367794-26367944ENSR22_9DGKK, ENSR22_587G8C
CTCFBCORNR2F1ZNF217RAD21EGR1XRCC5SMC3ZNF143TRIM22POU2F2FOXM1
SEZ6LGH22J026377-None0.0000Enhancer99-Distancechr22:26377634-26377784-
CTCFRFX1SMC3RAD21
SEZ6LGH22J026640-22:26644382:A:C1.0670Promoter/Enhancer616EliteeRNA_co-expressionchr22:26640781-26646026ENSR22_C4MD9, ENSR22_C4MDG, ENSR22_5897SM
IKZF1EP400DNMT1ATF3HDAC1MTA2MLLT1CUX1ATF7GATAD2ACREMARID1BMCM3JUNDMNTZNF384ASH2LCTCFZNF24ARID2POLR2AFOXK2PRDM10E4F1NCOR1RFX1AFF1NFATC3NFRKBZNF280AZNF407ZBTB2PHB2SMARCA4IKZF1MIER1ARNTELF4ZBTB40ZNF639DPF2NBNELF1BCORMCM5GMEB1MCM7PHF21AHDAC1MCM2NCOA4MTA1NFXL1ZBTB5MLLT1HDAC2ZNF184MCM3TRIP13GATAD2AEHMT2ATF2TRIM24ARHGAP35SMARCA5ZSCAN29RBBP5MTA2RNF2SMARCE1MYNNC11orf30CTCFRESTMTA3MNTEP400ZNF316BACH1RBFOX2GATA1CREB3L1ZBTB7ACBFBJUNDTBL1XR1CREMARID1BPOLR2GETS1RAD21HDAC1ZNF592RUNX3MEIS2IRF1SPI1EP300JUNGATAD2BFOXK2PRDM10CBFA2T2MAXBHLHE40MITFRAD51USF1ZNF384AFF1PKNOX1MEIS2GMEB1ARID1BDPF2MNTHDAC2ZFXGATA1SAP30KDM1APHF8KDM5BRBM39ZEB2TCF12TAL1POLR2AEP400RBFOX2CBFA2T2CBFA2T3ZNF592RBBP5NCOR1NCOA6HNRNPLLRESTASH2LCTCFSIN3ARLFTEAD4POLR2GNFICMXI1GATAD2BE2F6ELF4ZFP91YY1UBTFRNF2E2F1TRIM28ELF1IKZF1TCF7ZNF24SKILCREB3L1L3MBTL2EP300NR2F1TAF1ATF7ZNF217CUX1SMC3MTA3TRIM24FOXK2IKZF2NR2F2MAXRAD21SP1CTBP1CREMSOX6NBNMYCRXRACC2D1AXRCC5RFX1HCFC1JUNGABPB1ZEB1HNF4ANCOA1E2F8ZBTB11JUNDPKNOX1ZHX2ARID2ZNF143TBL1XR1NANOGPRDM10FOXA2TBPTRIM22NEUROD1NRF1ZKSCAN1ZNF384GATA2RCOR1TAF7ARID3ASTAT3IRF1RB1BACH1EGR1GATA3HDAC1TCF12SIX5SIN3A
SEZ6LGH22J026647-22:26647630:T:C1.1076Enhancer343EliteeRNA_co-expressionchr22:26647499-26649554ENSR22_73KBBB, ENSR22_9DKKN, ENSR22_9DKKZ
SUZ12EEDHDAC2RAD21RUNX3TAF1ZBTB33TAF7KDM1AZEB1POLR2ATCF12ASH2LSMARCA4EGR1YY1SMC3SRFEP300JUNDNANOGZZZ3JUNDMXI1RESTSPI1
SEZ6LGH22J026657-22:26658235:C:T0.9439Enhancer446EliteeRNA_co-expressionchr22:26657000-26659646ENSR22_B79SN, ENSR22_C4MFF
NFICNFIBBHLHE40ZBTB33RFX1ASH2LMXI1EZH2EP300ZNF263PHF8SMC3HNRNPKRBBP5MAXIKZF1POLR2ACTBP1SMARCA4KDM4ARUNX3EEDZNF143TAF1TBPSAP30RAD21NFXL1ASH2LNFXL1KDM1AGATA1PTBP1SMARCA5BCORRBM25SIN3AGATA2ZMYM3ZNF143HDAC2SMC3TAF7GATAD2BDPF2RBFOX2E2F1SIN3AZNF263GABPB1IKZF1MEF2BL3MBTL2IKZF2RLFEGR1NRF1GMEB1SP1E2F8LEF1TAF1PKNOX1SKILATF2POLR2ARB1SMARCC2MTA1MNTNCOR1CREMSAP30CTBP1ATF3SMARCA4NBNMXI1RNF2TCF12RESTNCOA1EEDTAF9BCREB1MTA3RUNX1C11orf30JUNIRF4ZNF316TBL1XR1RCOR1ZEB1TRIM28FOSMTA2MAFKJUNDTRIM24MEIS2EP400MAXNFICCLOCKMYCIRF1ZNF318HDAC1HES1CREB3L1TAL1TEAD4ARID1BBHLHE40KDM1AZNF592NR3C1FOXA1PBX3USF2STAT3ATF7RAD51ZNF639BACH1SMARCB1MAFFCBFA2T3FOSL1SMARCE1CTCFEP300ZEB2NFE2L2NFE2USF1FOXK2FOSL2BATFETV6CBFA2T2MITF