GWAS Annotated: SLC28A1

Gene: solute carrier family 28 member 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
SLC28A1GH15J084669-15:84669469:C:CA1.0548Enhancer36-C-HiCchr15:84669449-84669708ENSR15_938LD7
CREB1FOSL2JUND
SLC28A1GH15J084816-15:84825987:A:G0.8707Promoter/Enhancer567EliteC-HiCchr15:84816587-84826227ENSR15_938MXZ, ENSR15_5PXMFF, ENSR15_5PXMHW, ENSR15_5PXMJX, ENSR15_BLSHM, ENSR15_BLSHS, ENSR15_BLSJ3
YY1KDM4ARBBP5POLR2AHDAC2RAD21CTCFUSF2TBPJUNDASH2LPHF8SIN3AGABPARAD21ZNF143MYCSP1SPI1MNTRFX1GABPB1CTCFMYCUSF2EGR1BMI1IKZF1USF1NANOGZNF687ETS1CREMYY1KDM1ARESTNR2C1RNF2ZFXMAXZNF592SKIL3MBTL2GABPANR2F2MGAHNF4ASIN3AESRRAJUNDFOSCREB1RXRASP1ELF1FOSL2USF1EP300TBL1XR1NCOR1FOXA1FOXA2CTCFRAD21HNF4GHNF4AZBTB7APOLR2AEBF1CREB3L1HDAC2EGR1ZNF592MNTL3MBTL2CTCFXRCC5MAXCC2D1AMYCRNF2ZNF143TRIM22UBTFSOX6ARNTAFF1ESRRANCOA1MTA1RAD21NR2F6SMC3RESTNR2C1CTBP1ZEB2MTA3NBNMLLT1IKZF1LEF1SMARCA4HDAC1NR2F1ARID1BNR2F2NRF1SMARCE1CBFA2T3POLR2APOLR2ARFX1CTCFRAD51USF2RAD21USF1MITFRXRASP1HNF4AYY1NR2F2RESTMAXRAD21GABPAEGR1EP300JUNDATF3FOXA1FOXA2HNF4GZBTB33RESTATF3ASH2LZNF263CTCFZNF24
SLC28A1GH15J084845-15:84845145:C:T0.9974Enhancer249EliteC-HiCchr15:84845026-84845556-
ZBTB33JUNDFOXA1SP1ETV4RAD21ATF3HNF1AEGR1RXRAHDAC2EP300HNF4ARESTFOXA2POLR2AYY1ZNF384CTCFCHD4XRCC5ZSCAN29CBX3TRIM22KDM1ASIN3ARAD21GATA3
SLC28A1GH15J084863-15:84864333:A:C0.7293Enhancer173EliteDistancechr15:84863852-84864723ENSR15_84HCX9
YY1NR2F1ZNF316CTCFNR2F6MAFKMAFFGATAD2ARAD21IKZF1REST
SLC28A1GH15J084867-15:84868710:A:G0.6104Enhancer56-Distancechr15:84867416-84869324-
CTCF
SLC28A1GH15J084869-None0.0000Enhancer36-Distancechr15:84869600-84870200--
SLC28A1GH15J084871-15:84872636:T:C2.0659Enhancer144EliteDistancechr15:84871303-84872699ENSR15_76ZQ74
CTCFRAD21SMC3RESTPOLR2AMITFUSF1
SLC28A1GH15J084878-15:84878603:T:G0.4057Enhancer232EliteDistancechr15:84878400-84878956ENSR15_BLSRW, ENSR15_5PZ2Z2
DPF2ASH2LCTCFZNF217L3MBTL2CTBP1RCOR1SIN3AHCFC1PKNOX1IKZF1CHD1SKILESRRACC2D1AXRCC5HNF4AZBTB33TRIM22RAD21ZNF143ZNF579MYCELF1MAXSMARCA5YY1GABPARB1JUNDZNF24CUX1SMC3MTA3SPI1GATA3RESTGATA2ZNF444C11orf30ZNF384
SLC28A1GH15J084883-None0.0000Enhancer137-Distancechr15:84883589-84883739-
ATF3YY1JUNDPKNOX1CREB1POLR2ASP1MEIS2RAD21LCORLATF2ARID3AFOXA1ATF7FOXA2
SLC28A1GH15J084884-15:84884872:C:T1.8498Promoter/Enhancer375EliteDistancechr15:84883790-84889466SLC28A1_1
ATF3YY1JUNDCREB1POLR2ASP1MEIS2RAD21LCORLARID3AFOXA1ZBTB33POLR2AGABPASP1SIN3AYY1NR2F2HNF4AATF3RXRACTCFMAXJUNDCREMTFAP4RAD21FOXA2EGR1RESTHDAC2EP300MAFKARID3AFOXA1MNTNCOR1KDM1AMAFFHNF4GETS1SMC3ZNF24TAF1YY1HNRNPLPOLR2ASP1RESTASH2LHNF4AKDM1ARXRAJUNDEGR1MAXTAF1HNF4GRAD21MAFFMAFKNR2F6SIN3ATBPNRF1SKISOX13EP300FOSL2TCF12BCL3FOXK2FOXA2FOXA1HCFC1HNF4ASPI1ZBTB7ATAF15ZKSCAN1SMARCA4EGR1SMARCA4
SLC28A1GH15J084889-15:84890227:G:A0.9937Enhancer133-Distancechr15:84889824-84891604-
ZNF512BHDAC2ETV6ZNF24CTCFCREMJUNBRESTSMC3BCORZMYM3KDM1AZNF263NFIB
SLC28A1GH15J084894-15:84894581:G:A1.0638Enhancer151-Distancechr15:84894571-84895662-
SMARCA5ZBTB33ELF1E4F1SMARCE1ELK1ZBTB7BZNF217ZNF8RCOR1MBD2CTBP1MNTATF7DPF2FOSESRRASIN3ANEUROD1ZNF592POLR2ARFX1CREB1ZNF687GATAD2BMYCHCFC1CTCFSMARCA5ZBTB33
SLC28A1GH15J084904-15:84904809:G:A1.1763Enhancer118EliteDistancechr15:84904100-84905096ENSR15_938NW9
BCOREGR1CTCF
SLC28A1GH15J084907-15:84909036:GT:G1.2052Enhancer230EliteDistancechr15:84907923-84909558-
HDAC1CHD4KDM1ACBX1CBX3RB1PHF20HDAC2BCORZMYM3ZNF143RCOR1RBM25SMARCA5HNRNPLZNF217HDAC2TFAP4MYCZNF687ZNF444CTBP1NCOA3ZNF263
SLC28A1GH15J084911-15:84910323:T:C0.9442Enhancer133EliteDistancechr15:84910132-84910389-
ZBTB7ANFICNFIB
SLC28A1GH15J084910-15:84914165:G:A0.9504Enhancer488EliteeRNA_co-expression,Distancechr15:84910696-84915994ENSR15_84HDXF, ENSR15_CBFHF, ENSR15_CBFHK, ENSR15_84HF34
GABPAMAXRXRAEGR1POLR2AHNF4ASP1ZBTB33YY1FOXA2CREMMYCNFICASH2LGABPATBPRESTTAF1IKZF2RAD21MAFKSP1MAFFETV4IKZF1POLR2GHNF4GPOLR2ARFX5RBFOX2HNF1AELF1RBM22SIN3ATCF12CTCFATF7STAT3RELBEEDCREMSP1TBPFOSYY1PRDM10HNF4AEP300ZBTB33ATF3NR2F2JUNDSKIBCL3EGR1KDM1ANR3C1RXRABHLHE40MAXBATFRCOR1JUNMYCNFE2L2ZNF592RAD21FOSL2EBF1TFAP4SOX13FOXA2RBM39ESR1NFICFOXA1NR3C1CBFA2T3TAL1ZNF217POLR2AWHSC1ZNF592PHF8TAF1CTCFATF7ETV4TRIM28MTA3POLR2GSMC3ATF3CREMNRF1RNF2BCL3ELK1POLR2AZNF24ZBTB7BMNTDPF2MTA1L3MBTL2SMARCE1GATA3ATF2IKZF2XRCC5CTBP1ZNF217GABPAHDAC1JUNDESR1ARNTFOXK2HDAC2TCF12SMARCA4RESTARID1BCLOCKGATAD2BZNF444FOXA1SKICREB1MEF2BNFIBJUNBTBPBHLHE40BCORNCOR1ELF1NCOA1EP300E2F1MLLT1NR3C1IKZF1BACH1ETV6ZNF263TBX3MBD2ZNF282HNF1AMYCZHX2SIN3AETS1SP1JUNHES1RCOR1MAXNEUROD1NCOA3EBF1RELBE4F1PKNOX1RFX5TBL1XR1SREBF1RAD51FOSSKILMXI1CEBPBESRRAZNF318E2F6TFAP4RB1EEDFOSL2MITFIRF4BATFUSF2MTA2USF1ATF4NFE2L2ZNF687ZEB2MEIS2RUNX3SPI1LEF1ZNF143SOX6RAD21SMC3NFATC3SMARCA5TCF7NBNZBTB40EBF1SPI1TBX21NUFIP1FOXK2TRIM22PRDM10
SLC28A1GH15J084920-None0.0000Enhancer61-Distancechr15:84920124-84920499-
SP1IKZF1HNRNPK
SLC28A1GH15J084921-15:84921280:A:G0.3820Enhancer1-Distancechr15:84921269-84921399-
MEF2B
SLC28A1GH15J084923-15:84923839:A:G0.4863Enhancer126-Distancechr15:84923834-84925658ENSR15_BLT3K
YY1CHD4KDM1AHDAC2BCORZMYM3CTCFMAXRESTRBM25FOXA1NR2F6FOXA2JUNDSP1HNF4ARXRATAF1CEBPBEP300ZNF384
SLC28A1GH15J084926-15:84928346:T:G0.4692Enhancer384EliteDistancechr15:84926930-84930950ENSR15_BLT43, ENSR15_5PZCH5, ENSR15_BLT4C
ZSCAN29ZFXCTCFNFRKBNRF1IKZF2POLR2ABRD9ZNF592AFF1YY1IKZF1RESTESRRARFX5ATF7SKILSIN3AZNF184SREBF2NFATC3ZSCAN29NCOR1RELBCTBP1TCF12SMC3GABPARAD21TBX21RB1NBNSP1CUX1E4F1ZEB2ATF3GABPB1NCOA1CC2D1APKNOX1HMBOX1GATA3EP300XRCC5ZNF217E2F8TEAD4ZNF24MXI1BCORELF1STAT1CBX3BHLHE40TRIM22MLLT1IRF4ARID2MYCCREB1PRDM10IRF1SKIZBTB7ASIN3BRUNX3ZKSCAN1GATAD2AGATAD2BRCOR1ARID3AFOSL2ZNF143SMARCA5HDAC2ETV6HCFC1KLF16MAFKMAXZNF384FOXA1JUNDMNTCREMEGR1ZNF444NFIBSPI1ZBTB7BZNF512BBMI1HES1HDAC1SMARCA5ZNF687NRF1ESRRANFICEGR1IKZF1MYCRELBJUNBATF7NFIBPOLR2AIKZF2RCOR1HCFC1RFX1HMBOX1MLLT1CBX3NCOR1MTA3RNF2HDAC1GATA3ZNF592SP1MITFMYNNRAD21MNTZNF316ZNF579TBX3ZEB2FOXK2CLOCKFOSMAXMEIS2TBL1XR1TRIM24ZBTB2ZNF444RXRAZBTB7AC11orf30DPF2MTA2CREB1CTCFFOSL2NR2F6JUNDSMARCC2SIN3ALEF1HDAC2MAFFMAFKNR3C1CREMZHX2ETS1TAL1GATA4MTA1JUNNR2F2TCF12CTBP1BHLHE40NFE2L2EP300SREBF1RAD51GATAD2BBCL3ZNF217FOXA2NEUROD1PKNOX1FOXA1FOSL1ZNF24CBFA2T3ZBTB7BCUX1ELF1NCOA3SMARCE1TEAD4GATA2ARID1BNBNSMARCA4NFE2ELK1MBD2YY1NR2F1AFF1RESTHES1CBFA2T2GABPATFAP4SMARCA5
SLC28A1GH15J084947-15:84949057:C:T0.6687Enhancer293EliteDistancechr15:84947529-84949819ENSR15_BLT6Z, ENSR15_938PD8
NR2F2NFICKDM1AEP300ZNF512BZNF592RNF2RCOR1MGAJUNDFOXA1BHLHE40YY1FOSMAFKATF3RESTATF7IKZF1SMARCE1HDAC2SMARCC2NFE2L2JUNNFE2C11orf30ATF2ARID1BSMARCA4MTA2DPF2EHMT2MEIS2UBTFPKNOX1MYCTRIM28ZBTB33IKZF1TCF12TAL1ZNF512BCBFA2T3
SLC28A1GH15J084950-15:84950132:C:T0.2580Enhancer175-eRNA_co-expression,Distancechr15:84950003-84950384ENSR15_84HFR4
IKZF1TCF12TAL1ZNF512BCBFA2T3GATAD2AZNF384EP400GMEB1GATA1NRF1L3MBTL2MNTMGASMARCC2DPF2PHF21A
SLC28A1GH15J084951-15:84950972:A:G0.3487Enhancer173-Distancechr15:84950969-84951119-
EP400GMEB1L3MBTL2MNTDPF2HDAC3CBFA2T3HDAC1TRIM28POLR2AKDM1AARID1BRESTMYCSMARCA4NCOA1SMARCE1PHF8MAXPMLZNF24POLR2GZNF639TCF12GATA2ARNTATF7CREB3L1TAL1HDAC2SMARCB1TEAD4NFATC3EHMT2NFRKBMTA3GABPB1CDC5LZNF592MIER1PRDM10NCOA6NCOR1CBFA2T2NR2F2NR2F1NR2F6
SLC28A1GH15J084952-15:84953788:C:T0.3626Enhancer1-Distancechr15:84952933-84954549-
DACH1
SLC28A1GH15J084954-15:84955673:T:G0.6445Enhancer337EliteDistancechr15:84954929-84956000ENSR15_BLT82, ENSR15_5PZJ6W
ZNF316SIN3AUSF1EP400RBFOX2SP1ZNF592YY1DPF2CTCFSUZ12SKIHDAC2CTBP1RBM39ZNF263C11orf30SMARCA4NFIBARID1BTEAD4ZNF217ATF7MAFKIKZF1ATF4HDAC1ASH2LHNF4AZNF316MAFFNCOA1CHD1SKILCBX3RAD21NBNCEBPBRUNX3TRIM22ESRRAZNF444NFE2L2GATAD2BL3MBTL2BRD9EP300RXRAMAXCC2D1ABCL3IRF2NFE2BACH1JUNDZNF384ZNF24CREMZNF143SMC3RESTARID2SPI1ELF1POLR2AFOSL2TCF7ZNF579POLR2GETS1KDM1AZFP91PHF20
SLC28A1GH15J084959-15:84961781:A:G0.8373Enhancer317EliteDistancechr15:84959196-84961819ENSR15_BLT8R
ZBTB40NCOA3ZNF207GABPB1FOSJUNDDPF2ARID1BSMARCA4GATA2GATA1PRDM10ATF7ZNF384CEBPBMGAEP400CHAMP1ELF1PKNOX1ZBTB7AMAXHDAC1ELF4RNF2ZEB2FOXM1ZBTB40PMLE4F1HDAC2IKZF1MIER1AFF1NBNNRF1CTBP1NCOA1DACH1BCOREGR1ZFP91ZNF24CBFA2T3KDM1ASMARCA4DPF2SMARCC2NCOR1TRIM24NR2F6ZNF184NR2F2ARID3ATCF12ZBTB7AMYCSTAT5AEP300CBX3ARID1BCBFA2T2MAFFCREMMAFKTAL1GABPARAD21TRIM28ATF3BHLHE40FOSMITFSMARCE1JUNSTAT3RESTMAXNFE2TEAD4JUNDFOSL1ZNF384CEBPBFOS
SLC28A1GH15J084970-15:84970414:A:C0.5175Enhancer91-Distancechr15:84970068-84970862-
USF2CEBPBUSF1ATF7SP1HNF4ARXRAGATA3
SLC28A1GH15J084973-15:84973763:G:A0.3200Enhancer73EliteDistancechr15:84973505-84973908-
CTCF