GWAS Annotated Elements: SLC28A1

Gene: solute carrier family 28 member 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH15J084669 - 15:84669469:C:CA 1.0548 Enhancer - C-HiC chr15:84669449-84669708
CREB1FOSL2JUND
GH15J084816 - 15:84825987:A:G 0.8707 Promoter/Enhancer Elite C-HiC chr15:84816587-84826227
YY1KDM4ARBBP5POLR2AHDAC2RAD21CTCFUSF2TBPJUNDASH2LPHF8SIN3AGABPARAD21ZNF143MYCSP1SPI1MNTRFX1GABPB1CTCFMYCUSF2EGR1BMI1IKZF1USF1NANOGZNF687ETS1CREMYY1KDM1ARESTNR2C1RNF2ZFXMAXZNF592SKIL3MBTL2GABPANR2F2MGAHNF4ASIN3AESRRAJUNDFOSCREB1RXRASP1ELF1FOSL2USF1EP300TBL1XR1NCOR1FOXA1FOXA2CTCFRAD21HNF4GHNF4AZBTB7APOLR2AEBF1CREB3L1HDAC2EGR1ZNF592MNTL3MBTL2CTCFXRCC5MAXCC2D1AMYCRNF2ZNF143TRIM22UBTFSOX6ARNTAFF1ESRRANCOA1MTA1RAD21NR2F6SMC3RESTNR2C1CTBP1ZEB2MTA3NBNMLLT1IKZF1LEF1SMARCA4HDAC1NR2F1ARID1BNR2F2NRF1SMARCE1CBFA2T3POLR2APOLR2ARFX1CTCFRAD51USF2RAD21USF1MITFRXRASP1HNF4AYY1NR2F2RESTMAXRAD21GABPAEGR1EP300JUNDATF3FOXA1FOXA2HNF4GZBTB33RESTATF3ASH2LZNF263CTCFZNF24
GH15J084845 - 15:84845145:C:T 0.9974 Enhancer Elite C-HiC chr15:84845026-84845556
ZBTB33JUNDFOXA1SP1ETV4RAD21ATF3HNF1AEGR1RXRAHDAC2EP300HNF4ARESTFOXA2POLR2AYY1ZNF384CTCFCHD4XRCC5ZSCAN29CBX3TRIM22KDM1ASIN3ARAD21GATA3
GH15J084863 - 15:84864333:A:C 0.7293 Enhancer Elite Distance chr15:84863852-84864723
YY1NR2F1ZNF316CTCFNR2F6MAFKMAFFGATAD2ARAD21IKZF1REST
GH15J084867 - 15:84868710:A:G 0.6104 Enhancer - Distance chr15:84867416-84869324
CTCF
GH15J084869 - None 0.0000 Enhancer - Distance chr15:84869600-84870200 -
GH15J084871 - 15:84872636:T:C 2.0659 Enhancer Elite Distance chr15:84871303-84872699
CTCFRAD21SMC3RESTPOLR2AMITFUSF1
GH15J084878 - 15:84878603:T:G 0.4057 Enhancer Elite Distance chr15:84878400-84878956
DPF2ASH2LCTCFZNF217L3MBTL2CTBP1RCOR1SIN3AHCFC1PKNOX1IKZF1CHD1SKILESRRACC2D1AXRCC5HNF4AZBTB33TRIM22RAD21ZNF143ZNF579MYCELF1MAXSMARCA5YY1GABPARB1JUNDZNF24CUX1SMC3MTA3SPI1GATA3RESTGATA2ZNF444C11orf30ZNF384
GH15J084883 - None 0.0000 Enhancer - Distance chr15:84883589-84883739
ATF3YY1JUNDPKNOX1CREB1POLR2ASP1MEIS2RAD21LCORLATF2ARID3AFOXA1ATF7FOXA2
GH15J084884 - 15:84884872:C:T 1.8498 Promoter/Enhancer Elite Distance chr15:84883790-84889466
ATF3YY1JUNDCREB1POLR2ASP1MEIS2RAD21LCORLARID3AFOXA1ZBTB33POLR2AGABPASP1SIN3AYY1NR2F2HNF4AATF3RXRACTCFMAXJUNDCREMTFAP4RAD21FOXA2EGR1RESTHDAC2EP300MAFKARID3AFOXA1MNTNCOR1KDM1AMAFFHNF4GETS1SMC3ZNF24TAF1YY1HNRNPLPOLR2ASP1RESTASH2LHNF4AKDM1ARXRAJUNDEGR1MAXTAF1HNF4GRAD21MAFFMAFKNR2F6SIN3ATBPNRF1SKISOX13EP300FOSL2TCF12BCL3FOXK2FOXA2FOXA1HCFC1HNF4ASPI1ZBTB7ATAF15ZKSCAN1SMARCA4EGR1SMARCA4
GH15J084889 - 15:84890227:G:A 0.9937 Enhancer - Distance chr15:84889824-84891604
ZNF512BHDAC2ETV6ZNF24CTCFCREMJUNBRESTSMC3BCORZMYM3KDM1AZNF263NFIB
GH15J084894 - 15:84894581:G:A 1.0638 Enhancer - Distance chr15:84894571-84895662
SMARCA5ZBTB33ELF1E4F1SMARCE1ELK1ZBTB7BZNF217ZNF8RCOR1MBD2CTBP1MNTATF7DPF2FOSESRRASIN3ANEUROD1ZNF592POLR2ARFX1CREB1ZNF687GATAD2BMYCHCFC1CTCFSMARCA5ZBTB33
GH15J084904 - 15:84904809:G:A 1.1763 Enhancer Elite Distance chr15:84904100-84905096
BCOREGR1CTCF
GH15J084907 - 15:84909036:GT:G 1.2052 Enhancer Elite Distance chr15:84907923-84909558
HDAC1CHD4KDM1ACBX1CBX3RB1PHF20HDAC2BCORZMYM3ZNF143RCOR1RBM25SMARCA5HNRNPLZNF217HDAC2TFAP4MYCZNF687ZNF444CTBP1NCOA3ZNF263
GH15J084911 - 15:84910323:T:C 0.9442 Enhancer Elite Distance chr15:84910132-84910389
ZBTB7ANFICNFIB
GH15J084910 - 15:84914165:G:A 0.9504 Enhancer Elite eRNA_co-expression,Distance chr15:84910696-84915994
GABPAMAXRXRAEGR1POLR2AHNF4ASP1ZBTB33YY1FOXA2CREMMYCNFICASH2LGABPATBPRESTTAF1IKZF2RAD21MAFKSP1MAFFETV4IKZF1POLR2GHNF4GPOLR2ARFX5RBFOX2HNF1AELF1RBM22SIN3ATCF12CTCFATF7STAT3RELBEEDCREMSP1TBPFOSYY1PRDM10HNF4AEP300ZBTB33ATF3NR2F2JUNDSKIBCL3EGR1KDM1ANR3C1RXRABHLHE40MAXBATFRCOR1JUNMYCNFE2L2ZNF592RAD21FOSL2EBF1TFAP4SOX13FOXA2RBM39ESR1NFICFOXA1NR3C1CBFA2T3TAL1ZNF217POLR2AWHSC1ZNF592PHF8TAF1CTCFATF7ETV4TRIM28MTA3POLR2GSMC3ATF3CREMNRF1RNF2BCL3ELK1POLR2AZNF24ZBTB7BMNTDPF2MTA1L3MBTL2SMARCE1GATA3ATF2IKZF2XRCC5CTBP1ZNF217GABPAHDAC1JUNDESR1ARNTFOXK2HDAC2TCF12SMARCA4RESTARID1BCLOCKGATAD2BZNF444FOXA1SKICREB1MEF2BNFIBJUNBTBPBHLHE40BCORNCOR1ELF1NCOA1EP300E2F1MLLT1NR3C1IKZF1BACH1ETV6ZNF263TBX3MBD2ZNF282HNF1AMYCZHX2SIN3AETS1SP1JUNHES1RCOR1MAXNEUROD1NCOA3EBF1RELBE4F1PKNOX1RFX5TBL1XR1SREBF1RAD51FOSSKILMXI1CEBPBESRRAZNF318E2F6TFAP4RB1EEDFOSL2MITFIRF4BATFUSF2MTA2USF1ATF4NFE2L2ZNF687ZEB2MEIS2RUNX3SPI1LEF1ZNF143SOX6RAD21SMC3NFATC3SMARCA5TCF7NBNZBTB40EBF1SPI1TBX21NUFIP1FOXK2TRIM22PRDM10
GH15J084920 - None 0.0000 Enhancer - Distance chr15:84920124-84920499
SP1IKZF1HNRNPK
GH15J084921 - 15:84921280:A:G 0.3820 Enhancer - Distance chr15:84921269-84921399
MEF2B
GH15J084923 - 15:84923839:A:G 0.4863 Enhancer - Distance chr15:84923834-84925658
YY1CHD4KDM1AHDAC2BCORZMYM3CTCFMAXRESTRBM25FOXA1NR2F6FOXA2JUNDSP1HNF4ARXRATAF1CEBPBEP300ZNF384
GH15J084926 - 15:84928346:T:G 0.4692 Enhancer Elite Distance chr15:84926930-84930950
ZSCAN29ZFXCTCFNFRKBNRF1IKZF2POLR2ABRD9ZNF592AFF1YY1IKZF1RESTESRRARFX5ATF7SKILSIN3AZNF184SREBF2NFATC3ZSCAN29NCOR1RELBCTBP1TCF12SMC3GABPARAD21TBX21RB1NBNSP1CUX1E4F1ZEB2ATF3GABPB1NCOA1CC2D1APKNOX1HMBOX1GATA3EP300XRCC5ZNF217E2F8TEAD4ZNF24MXI1BCORELF1STAT1CBX3BHLHE40TRIM22MLLT1IRF4ARID2MYCCREB1PRDM10IRF1SKIZBTB7ASIN3BRUNX3ZKSCAN1GATAD2AGATAD2BRCOR1ARID3AFOSL2ZNF143SMARCA5HDAC2ETV6HCFC1KLF16MAFKMAXZNF384FOXA1JUNDMNTCREMEGR1ZNF444NFIBSPI1ZBTB7BZNF512BBMI1HES1HDAC1SMARCA5ZNF687NRF1ESRRANFICEGR1IKZF1MYCRELBJUNBATF7NFIBPOLR2AIKZF2RCOR1HCFC1RFX1HMBOX1MLLT1CBX3NCOR1MTA3RNF2HDAC1GATA3ZNF592SP1MITFMYNNRAD21MNTZNF316ZNF579TBX3ZEB2FOXK2CLOCKFOSMAXMEIS2TBL1XR1TRIM24ZBTB2ZNF444RXRAZBTB7AC11orf30DPF2MTA2CREB1CTCFFOSL2NR2F6JUNDSMARCC2SIN3ALEF1HDAC2MAFFMAFKNR3C1CREMZHX2ETS1TAL1GATA4MTA1JUNNR2F2TCF12CTBP1BHLHE40NFE2L2EP300SREBF1RAD51GATAD2BBCL3ZNF217FOXA2NEUROD1PKNOX1FOXA1FOSL1ZNF24CBFA2T3ZBTB7BCUX1ELF1NCOA3SMARCE1TEAD4GATA2ARID1BNBNSMARCA4NFE2ELK1MBD2YY1NR2F1AFF1RESTHES1CBFA2T2GABPATFAP4SMARCA5
GH15J084947 - 15:84949057:C:T 0.6687 Enhancer Elite Distance chr15:84947529-84949819
NR2F2NFICKDM1AEP300ZNF512BZNF592RNF2RCOR1MGAJUNDFOXA1BHLHE40YY1FOSMAFKATF3RESTATF7IKZF1SMARCE1HDAC2SMARCC2NFE2L2JUNNFE2C11orf30ATF2ARID1BSMARCA4MTA2DPF2EHMT2MEIS2UBTFPKNOX1MYCTRIM28ZBTB33IKZF1TCF12TAL1ZNF512BCBFA2T3
GH15J084950 - 15:84950132:C:T 0.2580 Enhancer - eRNA_co-expression,Distance chr15:84950003-84950384
IKZF1TCF12TAL1ZNF512BCBFA2T3GATAD2AZNF384EP400GMEB1GATA1NRF1L3MBTL2MNTMGASMARCC2DPF2PHF21A
GH15J084951 - 15:84950972:A:G 0.3487 Enhancer - Distance chr15:84950969-84951119
EP400GMEB1L3MBTL2MNTDPF2HDAC3CBFA2T3HDAC1TRIM28POLR2AKDM1AARID1BRESTMYCSMARCA4NCOA1SMARCE1PHF8MAXPMLZNF24POLR2GZNF639TCF12GATA2ARNTATF7CREB3L1TAL1HDAC2SMARCB1TEAD4NFATC3EHMT2NFRKBMTA3GABPB1CDC5LZNF592MIER1PRDM10NCOA6NCOR1CBFA2T2NR2F2NR2F1NR2F6
GH15J084952 - 15:84953788:C:T 0.3626 Enhancer - Distance chr15:84952933-84954549
DACH1
GH15J084954 - 15:84955673:T:G 0.6445 Enhancer Elite Distance chr15:84954929-84956000
ZNF316SIN3AUSF1EP400RBFOX2SP1ZNF592YY1DPF2CTCFSUZ12SKIHDAC2CTBP1RBM39ZNF263C11orf30SMARCA4NFIBARID1BTEAD4ZNF217ATF7MAFKIKZF1ATF4HDAC1ASH2LHNF4AZNF316MAFFNCOA1CHD1SKILCBX3RAD21NBNCEBPBRUNX3TRIM22ESRRAZNF444NFE2L2GATAD2BL3MBTL2BRD9EP300RXRAMAXCC2D1ABCL3IRF2NFE2BACH1JUNDZNF384ZNF24CREMZNF143SMC3RESTARID2SPI1ELF1POLR2AFOSL2TCF7ZNF579POLR2GETS1KDM1AZFP91PHF20
GH15J084959 - 15:84961781:A:G 0.8373 Enhancer Elite Distance chr15:84959196-84961819
ZBTB40NCOA3ZNF207GABPB1FOSJUNDDPF2ARID1BSMARCA4GATA2GATA1PRDM10ATF7ZNF384CEBPBMGAEP400CHAMP1ELF1PKNOX1ZBTB7AMAXHDAC1ELF4RNF2ZEB2FOXM1ZBTB40PMLE4F1HDAC2IKZF1MIER1AFF1NBNNRF1CTBP1NCOA1DACH1BCOREGR1ZFP91ZNF24CBFA2T3KDM1ASMARCA4DPF2SMARCC2NCOR1TRIM24NR2F6ZNF184NR2F2ARID3ATCF12ZBTB7AMYCSTAT5AEP300CBX3ARID1BCBFA2T2MAFFCREMMAFKTAL1GABPARAD21TRIM28ATF3BHLHE40FOSMITFSMARCE1JUNSTAT3RESTMAXNFE2TEAD4JUNDFOSL1ZNF384CEBPBFOS
GH15J084970 - 15:84970414:A:C 0.5175 Enhancer - Distance chr15:84970068-84970862
USF2CEBPBUSF1ATF7SP1HNF4ARXRAGATA3
GH15J084973 - 15:84973763:G:A 0.3200 Enhancer Elite Distance chr15:84973505-84973908
CTCF