GWAS Annotated: SPOCK1

Gene: SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
SPOCK1GH05J137023-5:137023807:T:C1.4024Enhancer6-Distancechr5:137023789-137023980--
SPOCK1GH05J137026-5:137026308:A:T0.6985Enhancer11-Distancechr5:137026050-137026470--
SPOCK1GH05J137036-5:137037135:C:T2.4700Enhancer143-Distancechr5:137036217-137037174ENSR5_942DKT
EP300SMC3SP1MXI1SMARCA4NANOGRAD21CTCF
SPOCK1GH05J137038-5:137039296:T:G0.4149Enhancer6-Distancechr5:137038902-137039306--
SPOCK1GH05J137050-None0.0000Enhancer1-Distancechr5:137050400-137050600--
SPOCK1GH05J137072-None0.0000Enhancer36-Distancechr5:137072091-137072241ENSR5_862RX5-
SPOCK1GH05J137073-5:137072559:CA:C0.0196Enhancer36-Distancechr5:137072411-137072561ENSR5_942DZ7
EP300POLR2A
SPOCK1GH05J137075-None0.0000Enhancer140-Distancechr5:137075291-137075441ENSR5_B327HJ, ENSR5_5378J27
CTCFTCF12SMC3XRCC5PKNOX1STAT3POLR2AZNF444RAD21YY1KLF16ELF1MYCZNF143GATA3FOSZNF24TRIM22
SPOCK1GH05J137085-5:137085502:T:C1.4513Enhancer9-Distancechr5:137085116-137085523--
SPOCK1GH05J137091-None0.0000Enhancer82-Distancechr5:137091591-137091741ENSR5_862SCG
PKNOX1FOSSP1
SPOCK1GH05J137141-5:137144042:G:C2.0819Enhancer280EliteDistancechr5:137141481-137144848ENSR5_942FP9, ENSR5_CHLFM
CEBPBEP300CEBPBZNF687FOSPKNOX1SMARCA4STAT3MYCMNTZNF217GATA3CREB1ZFXRCOR1MBD2DPF2FOXA1NCOA3CTBP1ESRRAMAXCLOCKEBF1ELF1POLR2AMTA2EGR1MBD2MYCJUNRAD21JUNDFOSDPF2FOXA1IKZF1RAD51STAT3CUX1PKNOX1CEBPBRCOR1BHLHE40ZNF592CTCFSMARCA4MAFKIKZF1
SPOCK1GH05J137145-5:137145409:A:G2.1752Enhancer387EliteeQTLs,eRNA_co-expression,Distancechr5:137145370-137148273ENSR5_B327TR, ENSR5_942FR5
MXI1HSF1TRIM28FOSBHLHE40EP300POLR2ANFE2L2RFX1BMI1MYCSMC3STAT3USF2RAD21CEBPBGATA2
SPOCK1GH05J137186-5:137187529:C:T1.1775Enhancer56-eQTLs,Distancechr5:137186782-137187841ENSR5_B3284N
RXRAFOSBHLHE40RCOR1EP300CEBPB
SPOCK1GH05J137199-None0.0000Enhancer1-Distancechr5:137199311-137199461--
SPOCK1GH05J137201-None0.0000Enhancer36-Distancechr5:137200091-137200241ENSR5_942GC5
CTCFRCOR1RAD21SMC3
SPOCK1GH05J137200-None0.0000Enhancer56-Distancechr5:137200971-137201161-
HDAC2NANOG
SPOCK1GH05J137205-None0.0000Enhancer36-Distancechr5:137205291-137205441ENSR5_942GDM
EP300STAT3FOS
SPOCK1GH05J137206-5:137206478:T:C1.3279Enhancer56-eQTLs,Distancechr5:137205640-137206502ENSR5_B3287G
FOSEP300CTCFNFE2L2RAD21SMC3
SPOCK1GH05J137218-None0.0000Enhancer56-Distancechr5:137218111-137218261ENSR5_B32897
MLLT1FOSSRFJUND
SPOCK1GH05J137219-5:137218579:C:T0.8857Enhancer56-Distancechr5:137218491-137218721ENSR5_B32897
JUNDFOSFOSL2EP300SMARCE1STAT3FOXA1POLR2A
SPOCK1GH05J137220-5:137220715:A:G0.2904Enhancer261EliteDistancechr5:137220399-137220801ENSR5_B3289J, ENSR5_5379FWM
CTCFTRIM28RAD21DPF2TRIM22ARID1BHMBOX1ATF7ZNF217SMC3ZNF143ZNF444SMARCA4CUX1ZNF687MNTCTBP1ESRRAGATA3ZEB2FOSL2RESTZNF24JUNDGATA2MITFZHX2CREB1RCOR1NRF1PKNOX1EHMT2ATF2ATF3STAT3RFX5HCFC1EP300FOSNFE2JUNCEBPBMAFKE2F1GATA1FOSL1SMARCA5C11orf30ATF4CREMMAFFZNF316
SPOCK1GH05J137231-5:137231194:G:A1.4013Enhancer36-eQTLs,Distancechr5:137231007-137233238ENSR5_942GN9
CTCFRBM25FOSMNT
SPOCK1GH05J137233-5:137236270:G:A1.4231Enhancer105-eQTLs,Distancechr5:137233666-137236566ENSR5_B328CM
PKNOX1CTCFJUNDCREB1ARNTIKZF2MTA2FOSMYCEP300ATF7BHLHE40BATFMNT
SPOCK1GH05J137263-5:137264151:C:T1.2120Enhancer91-eQTLs,Distancechr5:137263475-137264840ENSR5_B328HT
JUND
SPOCK1GH05J137270-5:137270396:T:C0.0907Enhancer56-eQTLs,Distancechr5:137270251-137270401-
ZBTB40
SPOCK1GH05J137282-5:137282376:C:T1.1430Enhancer99-Distancechr5:137282351-137282501ENSR5_942H7W
EP300SP1RAD21FOXA1CBFA2T2TEAD4TAL1CBFA2T3TCF12
SPOCK1GH05J137295-5:137296066:C:A0.8956Enhancer158-Distancechr5:137295379-137297061ENSR5_B328NH
MITFPOLR2APKNOX1
SPOCK1GH05J137300-5:137300856:T:G0.0793Enhancer71-Distancechr5:137300282-137301110ENSR5_942HF7
JUNDFOS
SPOCK1GH05J137303-5:137304074:T:G0.6189Enhancer36-eQTLs,Distancechr5:137303026-137304162-
ATF2CREB1HNF4AFOXA1
SPOCK1GH05J137305-5:137304359:A:T0.0795Enhancer56-eQTLs,Distancechr5:137304311-137304441ENSR5_942HG9
HNF4AFOXA1POLR2AFOXA2EP300GATA3
SPOCK1GH05J137304-5:137305186:A:G0.5693Enhancer76-eQTLs,Distancechr5:137304913-137305199-
GATA2GATA3
SPOCK1GH05J137309-5:137310118:G:A0.4507Enhancer261EliteeQTLs,Distancechr5:137309400-137311506ENSR5_B328QH
SMARCA4POLR2ASP1TBPFOSMAFKMAFFJUNDFOSL2CEBPBSTAT3
SPOCK1GH05J137312-5:137312692:C:T0.1709Enhancer1-Distancechr5:137312441-137315018-
POLR2A
SPOCK1GH05J137315-5:137315456:C:G0.1998Enhancer1-Distancechr5:137315195-137317266ENSR5_86326L
POLR2ACTCFEP300NR3C1
SPOCK1GH05J137320-None0.0000Enhancer56-Distancechr5:137320111-137320441ENSR5_B328RZ
ASH2LCTCFRBBP5SMC3RAD21REST
SPOCK1GH05J137321-None0.0000Enhancer105-Distancechr5:137320511-137320681ENSR5_B328RZ, ENSR5_537B43M
ASH2LCTCFRBBP5SMC3RAD21RESTTRIM22ZNF143
SPOCK1GH05J137327-5:137328642:T:C0.1342Enhancer1-Distancechr5:137327503-137328968--
SPOCK1GH05J137332-5:137334858:G:GGTCTCTAAGAACATTTA0.1295Enhancer1-Distancechr5:137332792-137335219-
EP300CEBPB
SPOCK1GH05J137335-5:137336905:C:T0.4582Enhancer63EliteDistancechr5:137335809-137336917--
SPOCK1GH05J137339-5:137341107:A:T0.4501Enhancer1-Distancechr5:137339456-137342176--
SPOCK1GH05J137346-None0.0000Enhancer105-Distancechr5:137344831-137344841ENSR5_8632R2
CTCFSMC3EBF1RAD21RESTKLF16YY1TRIM22MAFKZNF143FOS
SPOCK1GH05J137344-5:137344967:G:A0.1864Enhancer105-Distancechr5:137344851-137344981ENSR5_8632R2
CTCFSMC3EBF1RAD21RESTKLF16YY1TRIM22MAFKZNF143FOS
SPOCK1GH05J137345-5:137346953:C:A1.0944Enhancer105-eQTLs,Distancechr5:137344984-137347142ENSR5_8632R2
CTCFSMC3EBF1RAD21RESTKLF16YY1TRIM22MAFKZNF143FOSGATA2
SPOCK1GH05J137347-5:137348830:A:G0.5008Enhancer56-eQTLs,Distancechr5:137347719-137350153-
CEBPBFOXA1FOXA2
SPOCK1GH05J137350-5:137351145:C:T0.4405Enhancer99-eQTLs,Distancechr5:137350821-137353154-
C11orf30MAFKNFE2L2MAFFZNF316
SPOCK1GH05J137360-5:137361591:T:C0.1048Enhancer36-Distancechr5:137360745-137362253ENSR5_942J3R
FOSGATA2POLR2AFOS
SPOCK1GH05J137370-5:137370166:C:T0.7002Enhancer1-eQTLs,Distancechr5:137370031-137371398ENSR5_B32947
EP300STAT3FOSSMARCA4
SPOCK1GH05J137391-None0.0000Enhancer50-Distancechr5:137391876-137392134--
SPOCK1GH05J137414-5:137415211:T:C0.3306Enhancer36-Distancechr5:137414838-137416183ENSR5_B329BP
EP300JUNDFOS
SPOCK1GH05J137449-None0.0000Enhancer6-Distancechr5:137449191-137449404--
SPOCK1GH05J137450-None0.0000Enhancer6-Distancechr5:137450501-137450757--
SPOCK1GH05J137454-5:137456258:G:A1.5305Enhancer1-eQTLs,Distancechr5:137454205-137456424-
EHMT2
SPOCK1GH05J137462-5:137462230:C:T0.0130Enhancer149EliteeQTLs,Distancechr5:137462169-137462305-
CTCFTCF12SPI1ZNF143RAD21RCOR1
SPOCK1GH05J137469-5:137472037:G:A0.0636Enhancer192EliteeQTLs,Distancechr5:137469832-137472284ENSR5_B329LP
CTCFZNF316MAFKRESTGATA2GABPAATF3FOSBCL3FOSL2SIN3ASP1ZBTB33TCF12STAT3FOXA1MYCEP300JUNDNR3C1CEBPBUSF2BHLHE40NR3C1
SPOCK1GH05J137474-5:137475051:G:A0.7508Enhancer1-Distancechr5:137474192-137475584--
SPOCK1GH05J137477-5:137477668:G:A0.7259Enhancer1-eQTLs,Distancechr5:137477107-137478552-
GATA2POLR2A
SPOCK1GH05J137478-5:137480585:T:C1.2378Enhancer1-eQTLs,Distancechr5:137478961-137485167ENSR5_537C4D6
CTCFRAD21MNTZFXRAD51
SPOCK1GH05J137486-5:137486448:C:T0.0923Enhancer144EliteeQTLs,Distancechr5:137486002-137488146ENSR5_B329P3, ENSR5_942KFC
GATA2RCOR1JUNDFOSSTAT3EP300FOS
SPOCK1GH05J137490-5:137492664:C:A0.2126Enhancer144EliteeQTLs,Distancechr5:137490700-137492926ENSR5_942KGC, ENSR5_942KGP
ATF7ATF2BHLHE40CEBPBFOSSTAT3JUNDNFE2L2CEBPB
SPOCK1GH05J137493-5:137494495:TGTTATGAATATTAA:T0.6050Enhancer1-eQTLs,Distancechr5:137493780-137495984--
SPOCK1GH05J137497-5:137497593:T:A0.2487Enhancer147EliteeQTLs,eRNA_co-expression,Distancechr5:137497398-137497791ENSR5_86363C, ENSR5_537C7DQ
CTCFRAD21SMC3PRDM10
SPOCK1GH05J137498-5:137498961:G:A0.1133Promoter/Enhancer463EliteeQTLs,Distancechr5:137498399-137499401ENSR5_86364F, ENSR5_537C7PB, SPOCK1_1
SUZ12EZH2PHF8RAD21MXI1KDM4APOLR2AATF3RNF2SMC3CTCFRAD21RBBP5TRIM22RB1GATA2SMARCA4XRCC5EP300MAXYY1TAF1SMARCA5CREMMYCTBPZNF143BHLHE40EGR1ZNF384FOSREST
SPOCK1GH05J137560-None0.0000Enhancer71-Distancechr5:137560531-137560681ENSR5_942L7F
FOSGATA2
SPOCK1GH05J137562-5:137564707:G:C0.4484Enhancer224EliteeQTLs,Distancechr5:137562962-137566564ENSR5_CHMK4, ENSR5_CHMK8
GATA2FOSTBPSTAT3MYCCEBPBCTCFMXI1RCOR1TBPNR3C1FOSEGR1
SPOCK1GH05J137581-5:137582129:TAGAG:T0.1591Enhancer1-Distancechr5:137581811-137582704-
SPI1EP300CEBPB
SPOCK1GH05J137595-None0.0000Enhancer9-Distancechr5:137595183-137595235-
EHMT2REST
SPOCK1GH05J137604-5:137604868:G:A0.3694Enhancer61-Distancechr5:137604798-137604951ENSR5_8638CG
RFX1EP300FOSUSF1FOXA1
SPOCK1GH05J137618-5:137619694:G:T0.3753Enhancer188EliteC-HiCchr5:137618327-137620056ENSR5_B32BF8
GATA2ATF7GATA3STAT3JUNDFOSCEBPBEP300CTBP1RESTRAD51RCOR1GATA2USF1MNTMYCCREB1NFIBNFICMXI1
SPOCK1GH05J137620-5:137620994:C:T0.6172Enhancer213EliteC-HiCchr5:137620893-137623566ENSR5_CHMPC, ENSR5_537CZQ8
POLR2ASTAT3CTCFCEBPBMYCFOSSP1RXRAHNF4AATF3MAXRESTYY1JUNDPOLR2ARAD51NFYBBHLHE40USF2FOXA2RAD21RNF2STAT3MYCHNF4AUSF1FOSEP300CEBPBSPI1
SPOCK1GH05J137629-5:137629761:GCT:G0.7548Enhancer210EliteC-HiCchr5:137629691-137630021ENSR5_B32BGP, ENSR5_537D33P
CTCFRAD21SMC3SIN3ATRIM22ZNF143PKNOX1ZNF444YY1REST
SPOCK1GH05J138335-5:138336462:T:C2.4054Promoter/Enhancer660EliteTF_co-expressionchr5:138335036-138340043ENSR5_7B5M48, ENSR5_942WJ6, ENSR5_942WJC, ENSR5_942WJJ, ENSR5_537JJMC, ENSR5_7B5M7L, FAM53C_1
IKZF1ARID1BESRRASMARCE1FOSJUNRFX1GATA2JUNDNR3C1NR2F1FOSL2ATF3ATF4YY1SMARCC2KDM1ARBBP5GATA1POLR2ARBFOX2HMBOX1ZFP91ATF7PMLE2F1E2F4STAT3LEF1IKZF1NR3C1ATF3KDM4ASMARCA4IKZF2MNTBCL3ATF2CTCFBRD9ARID1BHDAC1RCOR1NR2C1PRDM10SMC3TRIM22HDAC2JUNDNR2F1NFATC3MTA1MYCESRRANCOR1PHF21ACREB1ZEB2AFF1MAXZFXZNF24SIN3ANBNTFAP4EP400BCORDPF2HDAC3ZNF318ZZZ3EP300ARNTNFICSOX6TBL1XR1CREMPHF8MITFTCF12GATAD2BRB1PRPF4MTA2TEAD4IRF1TRIM28GABPB1YY1MTA3CDC5LNCOA1GABPAZHX1TAF1ETV6ARID3AJUNRUNX3FOSMLLT1ATF4POU2F2IRF5BACH1ZHX2CEBPBRESTRELBPAX5FOSL2ETS1SMAD5BRCA1RBM39ASH2LKDM5AE2F8E4F1EGR1RFX5BCL11AZNF282IRF4JUNBHCFC1MEF2BZNF143ZNF217TRIM24CTBP1TBPZNF444ZBTB7ARNF2FOXK2POLR2GMAFFSP1AGO1CREB3L1ZBTB40SIX5ZNF592CHAMP1FOXM1SUZ12ELF1ELF4XRCC5MXI1MBD2GMEB1SRFKLF5CHD1BHLHE40NFRKBUSF1FOXA2ZBTB7BZNF207NFATC3RUNX3ASH1LSREBF1FOXP1JUNFOXA1NCOA3TBX21U2AF1TCF7L2ZBTB33MIER1NCOA2ELK1TRIM22MAXMCM7ZBTB5NEUROD1ARNTLEF1EGR1CBX3PCBP1CLOCKNR3C1ZNF579HNF4GWRNIP1CREB3L1EP400MTA2TBX3E2F8PKNOX1ZNF574TAL1SKILSTAT1IRF3SIN3BMEIS2MAFFSTAT3TAF1TBPTAF9BCBFA2T3ESRRANUFIP1RAD21SRFZFP91STAT5AZNF639HNRNPLLDNMT1L3MBTL2RXRAPHF8RESTGATAD2BZBED1EEDZNF282HNRNPLSOX6RB1NRF1E2F4UBTFBRCA1HNRNPUL1FOSL2SRSF4PHF20PHF21ARBM39KDM5BHDAC6SMAD1RBM14PRPF4SMAD5NFE2L2TBL1XR1IRF1FUSRCOR1GATAD2AZHX2IKZF2CBFBGATA3POU2F2TFAP4SOX13ZKSCAN1ZNF384TAF15RBM22ARID3ARLFTCF12MEF2APBX3KDM4BPAX5GATA4TAF7NCOR1USF2MYCKDM1ASRSF7RUNX3SMARCA4CTBP1MEF2CPCBP1RBM15CBX1ZNF24HNRNPKAGO2ZNF444ZBTB7ANFICZNF687MAFKPMLE2F6BACH1THAP1CREMGABPABRD4FIP1L1RB1NANOGHNF4GMITFPCBP2USF1RCOR1SMARCA4GATAD2AMLLT1TBL1XR1PRDM10XRCC5PHF8ZNF407RELBSPI1ZEB2POLR2AKDM1ABCORZMYM3