Regulatory Elements for SPTLC3

Full Name: serine palmitoyltransferase long chain base subunit 3

Location: chr20:13008972-13169103

Date: 2026-02-22 20:27:36

GHIDTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GH20J013008 Promoter/Enhancer 575 Elite eQTLs,Distance chr20:13008545-13011800 ENSR20_976F5, ENSR20_C39T4, SPTLC3_1, SPTLC3_2
ASH2LMAXHNF4APOLR2ARAD21SP1RXRAEGR1KDM1ARESTTAF1POLR2GSIN3BTBPCTCFRFX1EP300GATA3ZNF217JUNDHDAC2YY1KDM5ARAD21SMC3CHD4MTA3MEF2BNFICNFATC3ZNF217ATF2ATF3RCOR1IKZF1BMI1GATAD2BEP300JUNBRXRAMXI1SP1SMAD1IKZF2RELBPOU2F2TCF12DPF2ELF1ATF7SPI1TBX21BCL11ACREMMEF2ARESTMAFFRUNX3PAX5MAFKCREB1BATFEEDFOSNFYBMTA2IRF4RFX5BHLHE40STAT3NBNJUNDCEBPBSIN3ARBFOX2FOXA1FOXA2ARID3A
GH20J012976 Enhancer 275 Elite eQTLs,C-HiC,Distance chr20:12976540-12978366 None
KDM5APOLR2GSKINR2F6SP1RXRAFOXA1HNF4AFOXA2EP300HDAC2JUNDXRCC5RAD21ELF1HNF4GLCORLTFAP4ARID3AASH2LEHMT2HNRNPKGATA3HDAC1CEBPBFOXA1RBFOX2HNRNPLNR2F6KDM1AZBTB33HNRNPUL1MAXRESTETV4ELF1EGR1SKIHNF4GSOX13GATA4HDAC2NR2F2RXRASP1JUNDLCORLCREMHNF1AHNF4AFOXA2ARID3AFOXA1EP300NCOR1ZNF384NFE2L2CEBPBTCF7MAFFMAFKHNRNPK
GH20J012979 Enhancer 273 Elite eQTLs,C-HiC,Distance chr20:12979003-12979438 None
MAFKASH2LETV4CREMFOXK2GATA3HNF1ANR2F6FOXA1SP1EHMT2RXRAFOXA2TCF7RAD21HNF4GSOX13HDAC2FOSL2KDM1AARID3AHNF4AJUNDSMC3CEBPBGATA4EP300
GH20J013027 Enhancer 242 Elite eQTLs,Distance chr20:13027788-13031254 ENSR20_976LP, ENSR20_B4KS5
MYCCEBPBFOSSTAT3MAFKMAFFRBFOX2SIN3ATCF12BCL3MNTATF3PKNOX1JUNDZHX2FOSCREB1NR3C1ZNF24EP300DPF2FOSL2STAT3MYCSMARCE1SP1JUNCEBPBBHLHE40ZBTB40
GH20J013059 Enhancer 195 Elite eQTLs,Distance chr20:13059372-13059582 None
HDAC1ASH2LEHMT2KDM1AHDAC2NR2F6CREMNCOR1HNF1AMAFFPRPF4MAFKEP300RAD21XRCC5TCF12CTCFPOLR2A
GH20J013054 Enhancer 80 Elite eQTLs,C-HiC,eRNA_co-expression,Distance chr20:13054450-13056246 None
FOXK2
GH20J013089 Enhancer 220 - eQTLs,C-HiC,Distance chr20:13089250-13090722 None
ETV4CHD4PHF8KDM5AEHMT2KDM1AASH2LNCOR1SKIHNF1ATFAP4SOX13HDAC1TBPEP300GATA3ARID3AFOXA2NR2F6TBX3ZNF24RXRAFOXA1ETV4CREMFOSL2HDAC2HNRNPUL1CEBPBJUNDTCF12HNF4ARAD21GATA4ETS1SP1SMARCC2SMARCE1TCF7MAFKCHD4HNF4GZBTB40RBFOX2FOXA2
GH20J013119 Enhancer 204 - Distance chr20:13119633-13119783 ENSR20_977L8, ENSR20_554BLC
CTCFTCF7SMC3NBNRAD21XRCC5ZNF143TRIM22PCBP2FOXA1RESTZNF444ZNF24FOXA2CREB1RBM22ARID3ARB1YY1RUNX3BATFPOLR2ASMARCA5NCOR1
GH20J012970 Enhancer 171 - C-HiC,Distance chr20:12970392-12970542 ENSR20_97623, ENSR20_553D2G
CTCFRAD21KDM1ASKISMC3TRIM22JUNDZNF384
GH20J013034 Enhancer 99 - eQTLs,C-HiC,Distance chr20:13034930-13036469 None
NBNSP1ATF7JUNDCEBPB
GH20J013099 Enhancer 99 - Distance chr20:13099013-13099764 ENSR20_977DG
GATA3FOXA1KDM1AFOXA2CTBP1GATA3DPF2SMARCE1
GH20J012966 Enhancer 82 - C-HiC,Distance chr20:12966572-12966722 ENSR20_975XW, ENSR20_553CCW
CTCFSMC3RAD21TRIM22
GH20J012984 Enhancer 82 - eQTLs,C-HiC,Distance chr20:12984194-12985495 ENSR20_97668
MYCCEBPBSTAT3FOS
GH20J013100 Enhancer 82 - Distance chr20:13099813-13099983 ENSR20_977DG
CTBP1GATA3DPF2SMARCE1
GH20J013016 Enhancer 56 - eQTLs,Distance chr20:13016771-13018132 ENSR20_8DC27, ENSR20_976HT
RBFOX2BHLHE40USF1FOSZNF24ATF7JUNDCEBPBCTCFTCF12RESTSP1
GH20J012994 Enhancer 41 - Distance chr20:12994835-12994906 None
ZBTB40GABPA
GH20J013022 Enhancer 36 - Distance chr20:13022832-13022982 ENSR20_976K7
FOSNBN
GH20J013067 Enhancer 36 - eQTLs,Distance chr20:13067723-13069200 None
GATA3RXRA
GH20J013107 Enhancer 9 - C-HiC,Distance chr20:13107432-13107792 None None
GH20J013161 Enhancer 6 - Distance chr20:13161630-13161634 None None
GH20J012965 Enhancer 1 - C-HiC,Distance chr20:12965656-12966306 None
FOSCTCF