GWAS Annotated Elements: SRGAP1

Gene: SLIT-ROBO Rho GTPase activating protein 1

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH12J063842 - 12:63844946:T:C 0.8413 Promoter/Enhancer Elite Distance chr12:63842944-63847322
CREB1IKZF1HDAC2TCF12PHF8CTCFPOLR2GEGR1POLR2AZNF217PKNOX1NFYBRBM25YY1ZNF316RBFOX2DPF2EP300ELK1ESRRAELF1RBM39ARID3ASP1TAF1GATAD2BRUNX1MTA1RFX1NRF1TRIM28HNRNPLLPBX3SMC3MNTBACH1SKILCTBP1L3MBTL2JUNNFXL1RAD21MTA3SIN3BSIN3AHCFC1ATF7FIP1L1KDM5AZBTB33UBTFASH2LZNF282SOX6HNRNPKMXI1ATF2U2AF1HNRNPLRCOR1MYCTFAP4RUNX3RFX5ETS1GMEB1RB1ZSCAN29ZNF207RNF2ZFXTRIM22ATF3CUX1FUSZNF24AGO1STAT1RXRABHLHE40SKITAF7SMARCA4ZNF512BMAXNR3C1SAFBSMARCA5CREMZNF444PAX5ZNF579E2F6TBPZNF592GATA3CREB1ZBTB7AJUNDARNTXRCC5GABPARESTFOXA1ZNF143IRF4TAF15FOSL2SP1ARID2SRFCHD1CLOCKCBX1MBD2KDM4ARBM15DPF2ZNF263HDAC1RBBP5POLR2GIKZF1EBF1MEF2BZNF444CLOCKEP300GATA3RAD21MNTMYCRESTTFAP4ELF1SMC3ZNF217SP1MXI1SAP30KDM4ATCF12SIN3ACTCFSPI1RAD21SMC3FOXA1EZH2CREMKDM1ASIN3AGABPATBX3FOXA1POLR2ATBPARID3ASOX13EP300FOXA2HDAC2CTCFNR3C1STAT3FOSRAD21TAF1SMC3MXI1YY1MYCPKNOX1RAD21BCL3RESTELF1CEBPB
GH12J063848 - 12:63848638:G:C 0.8072 Enhancer - Distance chr12:63848600-63848800 -
GH12J063860 - 12:63862606:C:G 0.8288 Enhancer Elite Distance chr12:63860751-63864853
FOSCEBPBZFXYY1RAD21ZNF687EGR1ZHX2GABPARAD51ARID3ARXRARESTATF3DPF2SP1SIN3AFOSZNF592ZBTB33JUNDNFIBELF1HNF4GZNF217ETS1ESR1GATAD2BTCF12GATA3ZNF579POLR2ACREB1NCOA3TBPFOXA1RCOR1HNF4AMNTNR3C1ESRRAFOSL2CTBP1ATF7PKNOX1SMARCE1BCL3RFX5EP300FOXA2SMC3TCF7L2NANOGGATA3FOXA1L3MBTL2PKNOX1FOSCEBPBSTAT3CTBP1PKNOX1
GH12J063865 - 12:63865479:T:C 0.2631 Enhancer - Distance chr12:63865440-63865750 -
GH12J063882 - None 0.0000 Enhancer - Distance chr12:63882920-63883070
RCOR1PKNOX1MXI1USF2ZEB1TCF12USF1SMARCA4
GH12J063885 - None 0.0000 Enhancer - Distance chr12:63885145-63885932 -
GH12J063888 - 12:63889163:C:T 1.1757 Enhancer - Distance chr12:63888709-63890612
NR3C1FOXA1FOSL2FOSJUNDKDM1ASIN3ATCF12NR2F6ZBTB33ZNF384CEBPBSP1ASH2LHNF4ACREMJUNDYY1RAD21NR3C1POLR2AFOXA1EGR1RESTFOXA2RXRAHNF1ADPF2
GH12J063897 - 12:63897686:C:T 1.2119 Enhancer Elite Distance chr12:63897454-63898496
GATA1DPF2NCOR1TCF12IKZF1MAFKTAL1TEAD4SP1C11orf30POLR2AARID1BZNF316CBFA2T3RAD21YY1FOSTAF1
GH12J063900 - 12:63902053:G:A 0.5615 Enhancer - Distance chr12:63900993-63902850
SREBF1YY1POLR2ARAD21RESTFOXA1RXRASP1FOXA2HNF4AZNF579JUNDCHD1HCFC1CREB1GATA3ZNF592ZNF687ZHX2CUX1NFIBATF7GATAD2BFOSMYCMAFKFOXA2DPF2FOXA1MBD2BMI1NR3C1CTBP1ZNF217ZNF24NCOA3JUNTCF12FOSL2SMARCE1PKNOX1NEUROD1SMARCA5
GH12J063905 - 12:63905266:A:T 0.2431 Enhancer Elite Distance chr12:63905002-63906145
FOSNR3C1TRIM28FOS
GH12J063911 - 12:63912547:G:A 0.3850 Enhancer - Distance chr12:63911365-63913016
RESTCTCFZNF384
GH12J063913 - 12:63916303:G:A 1.1118 Enhancer Elite eRNA_co-expression,Distance chr12:63913084-63923701
ZNF384HNF4ATCF7L2ZNF316TCF12PKNOX1FOXA1ARNTSP1MAFKESR1RFX1MAFFFOSPOLR2ARAD21FOSRUNX3GATA2GATA3ESR1CEBPBMAFKFOSL2STAT3FOSFOXA1POLR2AZNF316MAFKMNTZNF687TAF1MYCFOXK2EP300SIN3ATBPSMARCC2SP1YY1CEBPBCREMZBTB33TCF12ATF7CTCFSIX5CREB1CUX1LCORLGATA3FOXA1JUNDTBL1XR1SKIFOSL2ELF1FOXA2ARID3AZBTB40ETS1TCF7RESTFOSNEUROD1BCL3RCOR1TCF7L2ZNF384NCOA3DPF2ZNF444JUNSMC3TBX3NFE2L2KDM1ASMARCE1NR3C1STAT3ZNF24GABPARXRAMAFFNR2F6RAD21ATF3ETV4CTBP1NCOR1ESRRARFX5ZNF217ELK1SPI1NFIBESR1SKILPKNOX1PAX5BHLHE40GABPAETS1ELF1RESTATF3ZBTB33ARID3AMNTJUNDFOXA2PAX8SP1BHLHE40TCF12FOXA1ZNF579ATF7FOXK2SMARCE1STAT3DPF2FOSL2ATF2NR3C1MYCJUNTBPCREB1FOSBCL3CTBP1LCORLZHX1PKNOX1CEBPBCTCFATF7FOSJUNDGATA2GATA3NCOA3RCOR1GATA3CEBPB
GH12J063930 - 12:63932048:C:T 0.4015 Enhancer Elite Distance chr12:63930192-63932104
GATA3NFICSTAT3JUNDFOSCEBPBEP300
GH12J063934 - 12:63935212:A:G 0.6092 Enhancer - Distance chr12:63934429-63935484
FOSSTAT3
GH12J063937 - None 0.0000 Enhancer Elite Distance chr12:63937462-63938730
SMARCA4GATA2MXI1USF1CEBPB
GH12J063940 - 12:63940402:TA:T 0.1123 Enhancer - Distance chr12:63940200-63941000
NR2F2RAD21GATA3RCOR1GATA2CTCFSMARCA4MAFKRAD21
GH12J063942 - 12:63943025:C:T 0.3953 Enhancer - Distance chr12:63942986-63943137 -
GH12J063949 - 12:63950064:C:A 0.4295 Enhancer Elite Distance chr12:63949607-63950714
EHMT2NR2F6CTCFSP1KDM1ARAD21EP300FOXA2HNF4AHNF4GGATA3
GH12J063955 - None 0.0000 Enhancer Elite Distance chr12:63955741-63956595
POLR2ACTCFJUNDRAD21MAXSP1RXRARESTBHLHE40EP300NR3C1STAT3SPI1USF2FOXA1ATF3FOSCEBPBBATFMYCZNF384ZBTB40
GH12J063967 - None 0.0000 Enhancer - Distance chr12:63967440-63967590
EP300MAFKZNF316FOSJUNDFOSL2MAFF
GH12J063977 - 12:63977355:G:A 0.8779 Enhancer - Distance chr12:63977136-63979310
C11orf30MAFKMAFFZNF316MAFKZBTB40TBPSP1DPF2MNTJUNDCEBPBMAFKGATA3FOSL2FOSSTAT3CREB1BHLHE40CUX1MYCMAFFZNF24NFE2L2NFIBSMARCE1
GH12J063982 - 12:63983042:G:A 0.3435 Enhancer - Distance chr12:63982654-63983170 -
GH12J063983 - None 0.0000 Enhancer - Distance chr12:63983320-63983470
FOS
GH12J063988 - 12:63989729:A:G 0.6018 Enhancer - Distance chr12:63988379-63989961
RAD21TBPCTCF
GH12J063992 - None 0.0000 Enhancer - Distance chr12:63992500-63992650
FOSSTAT3
GH12J063994 - 12:63994904:A:G 0.6293 Enhancer - Distance chr12:63994340-63995470
TAF1RCOR1RAD21STAT3
GH12J064004 - None 0.0000 Enhancer - Distance chr12:64004740-64004890 -
GH12J064005 - 12:64011191:T:TA 0.9666 Enhancer - eQTLs,Distance chr12:64005753-64011303
BHLHE40MAFKCEBPBGATA3JUNDIKZF1IKZF2BHLHE40SKILZNF384BATFZNF217ATF7C11orf30FOXA1DPF2FOXA2CTCFPKNOX1MAFKFOSL2FOSEP300BACH1GATA3NFE2L2NFE2JUNDRAD21MBD2NCOA3BHLHE40JUNRCOR1CLOCKCREB1BATFSMARCE1CTBP1ZNF579SRFSPI1
GH12J064020 - None 0.0000 Enhancer - Distance chr12:64020943-64020956 -
GH12J064028 - 12:64028902:A:G 1.1731 Enhancer - Distance chr12:64028649-64029676
ESR1
GH12J064038 - 12:64039952:C:A 0.6330 Enhancer Elite eQTLs,Distance chr12:64038923-64040390
RAD21CTCFTCF7L2USF2NR2F2MYCSP1TCF12USF1FOXA1TFAP4
GH12J064042 - 12:64043228:G:A 0.0085 Enhancer - Distance chr12:64042537-64043641
ATF4CEBPB
GH12J064064 - 12:64064705:G:C 0.0787 Enhancer - Distance chr12:64064618-64065332
RAD51MITFFOXA1
GH12J064065 - 12:64066034:GT:G 0.5447 Enhancer - eQTLs,Distance chr12:64065526-64067000 -
GH12J064079 - 12:64081779:T:TA 0.7581 Enhancer Elite Distance chr12:64079733-64082002
BHLHE40TCF12SIN3AZBTB7BCHD1ZNF579FOXA1ELF1NFIBZNF217CLOCKNR3C1MBD2DPF2CREB1NCOA3CUX1GATAD2BJUNDGATA3RCOR1CTBP1NANOGZNF512BRAD51ZNF24SMARCE1EP300NEUROD1RFX5SMARCA5FOSCREB1NCOA3NEUROD1CTBP1ESR1
GH12J064082 - 12:64082692:C:T 0.8181 Enhancer Elite Distance chr12:64082082-64084269
POLR2ATCF7L2YY1MAXHNF4AMXI1L3MBTL2SP1RCOR1FOXA1NFIBZNF687MYCRAD21RXRAPKNOX1NR2F2ZBTB33EP300USF1FOSCEBPBCREB1ATF2ATF7GATA3
GH12J064085 - 12:64090253:T:C 0.5293 Enhancer Elite eQTLs,eRNA_co-expression,Distance chr12:64085485-64090701
ATF3ATF7CEBPBATF4EP300POLR2ATAF1CTBP1YY1RAD21MXI1SP1POLR2AELF1ATF7EP300MNTJUNDATF3ZNF217USF2FOSJUNGATA3CEBPBDPF2SIN3AMITFTEAD4SPI1STAT3BCL3GABPAESR1SREBF1TBPZHX1FOSL2RESTBHLHE40FOSL1USF1MYCNR3C1SMARCE1MAFFCHD1GATA2RCOR1PRDM10TCF12SMARCA5FOXA1NFE2L2MAFKZHX1
GH12J064097 - 12:64097222:GT:G 0.9469 Enhancer Elite Distance chr12:64097100-64100215
STAT3JUNDFOSRAD21MYCRAD21FOSTCF7L2EP300JUNDFOSL2STAT3RAD21FOSMAFKBHLHE40
GH12J064101 - None 0.0000 Enhancer - Distance chr12:64101140-64101836
SPI1
GH12J064104 - 12:64105159:T:C 0.6615 Enhancer - eQTLs,Distance chr12:64104145-64105831
EP300STAT3USF1CTCFJUNDPOLR2AEP300FOSNR3C1MYCMYCFOS
GH12J064130 - None 0.0000 Enhancer - Distance chr12:64130535-64130655
CREB1
GH12J064137 - None 0.0000 Enhancer - Distance chr12:64137120-64137270
MNTCREB1ATF7ATF2
GH12J064150 - 12:64151150:C:T 0.3567 Enhancer - eQTLs,eRNA_co-expression,Distance chr12:64150931-64151286 -
GH12J064152 - None 0.0000 Enhancer - Distance chr12:64152908-64152929 -
GH12J064159 - 12:64161318:T:C 0.4508 Enhancer Elite eQTLs,Distance chr12:64159715-64161450
FOSPOLR2AFOSTRIM24STAT3CEBPBATF4
GH12J064169 - 12:64169979:G:A 0.6194 Enhancer Elite eQTLs chr12:64169811-64173492
POLR2AGATA3STAT3FOSFOXA1POLR2AJUNDFOSMYCSTAT3PCBP2HNRNPKZNF263RXRAGATA3
GH12J064403 - 12:64404338:C:G 0.5279 Promoter/Enhancer Elite TF_co-expression chr12:64403280-64406288
ATF3MEIS2ATF4FOXA1MNTFOXA2EP300MLLT1SMARCE1ZBTB11ZNF592MGATAF1PKNOX1RBFOX2ZNF687STAT5APOLR2AASH2LTAF7MNTE2F1ATF7PHF8RESTYY1POLR2GRAD51EP300FOXK2NRF1SMAD5CBFBCREB1ATF2JUNDMXI1GABPB1TEAD4CREMELF4XRCC5SMAD1MAXTBPSP1TCF12TCF7L2POU2F2MBD2ATF3SIN3AGABPAMEIS2ZNF143IRF1KDM5BFOSCBX1TAL1L3MBTL2SOX6ZBTB40ETV4ESRRATRIM22GMEB1HDAC1MTA1USF2ZBTB2HCFC1RFX5ELF1SETDB1CTCFIKZF1MYCZHX2ELK1AFF1EGR1CREB3L1NCOA6GATAD2BETS1ZKSCAN1CUX1BHLHE40ZNF24ARNTIRF2FOXA1FOSL2ZNF217USF1CTBP1BCL3ESR1RUNX3SUZ12JUNPAX5THAP1E4F1ATF3SIX5KLF5HNRNPLLZBTB7AMAFKBACH1RFX1E2F6DPF2SMARCA5MEF2ASKIMAFFSKILARID3ASMARCE1HNRNPLRB1TAF15NFE2RAD21ZSCAN29AGO1U2AF1PHF8C11orf30IKZF2FUSPCBP1HNRNPUL1EP400RBM34ZFXAGO2SAP30SMC3PRPF4FIP1L1SREBF1NFRKBNEUROD1NBNKDM4APHF20CHD1RBBP5ZNF639ZNF282MIER1ZNF512BUBTFHDAC2RBM14ZBTB1RNF2NCOR1CLOCKZNF687RBM39ZBTB7BZNF444ZNF263ZNF24ELF4MBD2NFICGATAD2BTFAP4RESTTAF9BMLLT1TAF7ATF4SMARCA4HNRNPKTEAD4RUNX3L3MBTL2YY1SRSF7MGABRD4E2F8KDM1AEGR1HDAC1BRD9SP1CREB3L1ATF3TCF12GATA3ZBED1RBM22KDM4BGATA4NR3C1E4F1MYCTAF1ATF7MAXJUNDSOX6NEUROD1NRF1TRIM24E2F6ELF1MITFESRRAHES1TRIM28NFATC3AFF1GABPATBPIRF2ARNTKDM5AZNF217CEBPBZBTB7AJUNZNF318ATF2USF1MTA3HMBOX1TBL1XR1RAD51SMAD1ZNF574FOSL1ZNF143HDAC3ZBTB40NFRKBNR2C1ZZZ3KDM5BZNF592MLLT1ZBTB33ZSCAN29TBPZNF384MNTTCF12SOX6SMARCE1ZBTB40ZNF639C11orf30EGR1POLR2GKDM1ACTCFBCORHDAC2RB1MITFSMARCA4
GH12J064521 - 12:64522511:C:T 0.4774 Enhancer Elite eQTLs chr12:64521961-64523225
IKZF2SMARCA4TRIM24NR2F2NR2F6CEBPBMAXHES1EGR1NR2F1BHLHE40ATF3ATF4RUNX3JUNDBACH1MAFKMAFFNFE2NFE2L2C11orf30ZNF316