GWAS Annotated: STIM2

Gene: stromal interaction molecule 2

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
STIM2GH04J025908-4:25908795:T:A0.6734Enhancer226EliteTF_co-expressionchr4:25908114-25909081ENSR4_B75SC
IKZF1FOSFOSL2STAT3JUNDKDM1ARESTNFE2SMARCA4MAFKNFE2L2ATF3SKITFAP4NR2F6FOXK2FOXA1FOXA2MNT
STIM2GH04J026014-4:26015181:G:A0.4224Enhancer213EliteeQTLschr4:26014269-26016830ENSR4_C4KNW
NR2F2CTCFRAD21FOSJUNDBHLHE40USF2EP300CEBPB
STIM2GH04J026019-4:26021218:A:G1.0587Enhancer308EliteeQTLschr4:26019778-26024287ENSR4_9DBT2, ENSR4_5858LN
MEIS2E4F1CTCFRFX1BMI1MAFKEP300SRFPOLR2ASTAT3FOSCEBPBPOLR2ASTAT3EP300ATF2PKNOX1CUX1TCF12EP300KDM1ARXRATBX3HNF4ASKISP1ARID3AATF3JUNDFOXA2MYCRESTFOXA1DPF2GATA3FOSTCF7TCF7L2MAFKSMARCE1POLR2AFOSL2MAFKFOXA2
STIM2GH04J026028-4:26031268:T:TA0.7799Enhancer292EliteeQTLschr4:26028282-26034152ENSR4_D39TG, ENSR4_C4KQ6
YY1TAF7ASH2LCTCFAGO1CTBP1RAD21POLR2AXRCC5SMC3IKZF2TAF15TRIM22ZNF143DPF2EP300MAXEEDPOU2F2GABPARB1GATAD2BYY1RUNX3IRF4SMARCA5TCF12SP1BHLHE40SMARCA4RXRAHNRNPLLEGR1RESTTAF1TBPSRFIKZF1MEF2BNANOGTAF7EBF1CHD1RBBP5NFIBNFICTBPTAF7POLR2AEBF1TBPKDM1AMAFKTAF7EGR1ASH2LJUNDSP1RESTEP300NANOGIKZF2CHD7EBF1MEF2BRAD21BACH1TRIM22YY1HDAC2IKZF1SPI1BHLHE40FOXA1FOXA2FOSCEBPBRAD21SMC3TAF1FOXA2EP300FOXA1RAD21RCOR1FOSBHLHE40CEBPBPBX3SMARCA4EP300
STIM2GH04J026039-4:26039602:G:A1.1893Enhancer63EliteeQTLschr4:26039491-26040288ENSR4_B76JC
RCOR1GATA2NR2F2
STIM2GH04J026778-4:26778960:G:A0.5017Enhancer91-Distancechr4:26778794-26781322ENSR4_B7BHD, ENSR4_9DM23
CTCFSIN3AFOSSTAT3JUNDPOLR2AFOSJUNDSTAT3
STIM2GH04J026781-4:26782940:C:T0.9334Enhancer224-Distancechr4:26781903-26783234ENSR4_9DM2J
EP400MNTGMEB1KDM1AZBTB40IKZF1E2F1ATF2ATF3CREB1ATF7CTCFNRF1HDAC1ARNTPOLR2ACTBP1CEBPBELK1NBNFOXK2PRDM10CBFA2T3ARID1BL3MBTL2DPF2EHMT2MTA2MTA1MLLT1MYCTRIM24GATAD2AZSCAN29RESTNFATC3UBTFZBTB7ATBPCBX3ZEB2JUNSMARCC2HDAC3DACH1AFF1ESRRACC2D1AZNF24ZNF318CHAMP1SMARCA4BRD9ZNF282MYBL2YY1IRF2RNF2SMARCE1KLF16MBD2TCF12NCOA1RFX5HMBOX1TRIM28ARID3ATAL1RAD51NR2F1RCOR1PHB2MYNNTBL1XR1CBFA2T2NEUROD1MITFGATA1CUX1NCOA6JUNDNCOR1MEIS2MXI1STAT5AGATA2NFE2HDAC2TEAD4SOX6EP300PKNOX1ZNF384NR2F2NFICLEF1MAXUSF1BHLHE40NR2F6PMLFOXM1CREMIRF1FOSBRD4MGAHDAC2SOX6EP300SMARCB1
STIM2GH04J026787-4:26787609:A:G0.9015Enhancer245EliteDistancechr4:26787064-26789461ENSR4_9DM3T, ENSR4_9DM43, ENSR4_B7BJL
ZNF384CEBPBRXRANR2F2TCF7L2RESTSPI1GATA2KDM1ATRIM28CTBP1MYNNDPF2SMARCE1RNF2CTCFIRF1EP300GATA3FOSCBFA2T2TAF9BTAL1JUNDZEB2ATF7NFICHDAC2FOSL2DACH1MTA2SOX6ATF3JUNMYCCEBPBSTAT3TCF12CREMFOSL1ARID1BMAXCBFA2T3ZBTB7ARESTTFAP4ZNF24PRDM10SMC3RAD21C11orf30ZNF316NFE2IRF1
STIM2GH04J026802-4:26804693:C:G1.2535Enhancer133EliteeQTLs,Distancechr4:26802703-26805134ENSR4_B7BLS
L3MBTL2DACH1MGAGATA3GATA2RCOR1SMARCA4GATA2ZNF184
STIM2GH04J026811-4:26812830:GTA:G0.4253Enhancer82-Distancechr4:26811601-26813199ENSR4_9DMC8
MAXNR2F2YY1SP1RAD21FOXA2FOSFOXA2
STIM2GH04J026819-None0.0000Enhancer36-Distancechr4:26819058-26819228ENSR4_9DMF7
ASH2LHDAC2ETS1SP1RAD21CTCF
STIM2GH04J026821-4:26821821:T:C0.7586Enhancer290EliteeQTLs,C-HiC,Distancechr4:26821604-26823135ENSR4_B7BPJ, ENSR4_9DMG7
YY1TAF1CTCFXRCC5ZMYM3POLR2GHDAC2RAD21C11orf30MXI1ZNF316SMC3MAXEP300HDAC1NFE2L2KDM5AZNF24MAFFMAFKNFE2TFAP4KDM1ASIN3AMNTEHMT2ASH2LPOLR2GNR2F6YY1ETV4TCF7TBX3NRF1ZBTB33RAD21TAF1CREMGATA4RXRAJUNDRESTZMYM3HNF4AFOXA2SP1ZNF24ATF3TBPHDAC2HNF4GEGR1FOXA1FOSSOX13MAFFARID3AFOSL2ELF1IKZF1DPF2STAT5AMTA2NFATC1TBX21CBFBATF2BCL3MEF2AGABPARUNX3TCF7PKNOX1IKZF2NFICARID3AETV6POU2F2JUNBBATFYY1TRIM24
STIM2GH04J026826-4:26826816:C:T0.8037Enhancer241EliteeQTLs,C-HiC,Distancechr4:26826400-26827578ENSR4_B7BQ7
SMARCA5POLR2ATAF1MTA3YY1TRIM22NBNGABPANFATC1NR2F2ATF7STAT5AIKZF1CBX5RCOR1SKILZBED1MXI1ZNF143ELF1NFICARNTMTA2SP1TBL1XR1BMI1CUX1ETV6IKZF2EP300GATAD2BBHLHE40IRF4PAX5RESTBCL3NFATC3EEDTBX21EBF1MEF2AMEF2CRUNX3ATF2DPF2BATFRELBMEF2BTCF12ARID3AZNF384JUNBCREMSPI1RXRABCL11AMYB
STIM2GH04J026839-4:26839881:C:T0.1250Enhancer82-Distancechr4:26839599-26840000ENSR4_B7BS3
ZNF384EGR1CBFA2T3TAF1SMARCA4CTCFESR1MNTNR3C1FOSMYC
STIM2GH04J026856-4:26858791:G:A0.5960Promoter/Enhancer639EliteeQTLs,TF_co-expression,Distancechr4:26856762-26863437ENSR4_58BK4C, ENSR4_58BK7J, ENSR4_58BK84, ENSR4_58BKKG, ENSR4_58BKP6, ENSR4_9DMT7, STIM2_3, STIM2_1, STIM2_2, STIM2_4
MITFZNF263MEF2BPMLHDAC2ZBTB33CC2D1ANBNBMI1EHMT2MTA2STAT5AZNF316MLLT1ASH2LGMEB1MTA3PHF8IKZF1TAF1KDM5BPOLR2ARELBSMARCA5CTCFPKNOX1RBFOX2MNTATF3MTA1IKZF2ATF2POLR2GTRIM28RAD21MAXDPF2TRIM22NRF1SIN3AMBD2ZBTB2MXI1EEDEGR1ATF7EP300KDM4AAGO1SKILSOX6GABPB1ZNF282ZNF592NFICZNF687GABPASKIZNF143CREMBACH1ZNF207CREB3L1IRF1SP1CBX1KLF5PCBP1ZBTB40RB1YY1BCL3CEBPBJUNDELK1TAF7ETV6GATAD2BTCF12ELF1JUNMYCARID3AHNRNPKSAFBCTBP1ETV4BHLHE40XRCC5RUNX3MEF2AHCFC1FUSRBM39USF1L3MBTL2PAX5ZEB1MEIS2UBTFSTAT1THAP1ZBTB11ETS1ZKSCAN1SMAD1ESRRAZNF217ZNF639SMC3RUNX1RESTHNRNPLLSMAD5SAP30SIN3BGATA4RNF2SMARCA4ATF4SMARCE1HNF4AHDAC1RBBP5ZNF579BCORCHD1SMARCA4SMARCC2ZBTB40HDAC2ZBTB2EHMT2ZNF184ARID2IKZF1PRDM10HNRNPKMLLT1ETV4KDM1ARNF2FOXA1MYCGATAD2BHMBOX1DPF2C11orf30MITFGATA1SMARCE1SMARCC2RESTDACH1FOXK2CBFA2T2SMARCA4TAL1NFE2L2ZNF24NFE2TEAD4CBFA2T3CEBPBEP300ARID1BPOLR2AESR1ZBTB40NFATC3MAXKDM4AATF4CTCFHNF4APOLR2ACREMSUZ12IRF2ZSCAN29YY1FOXA2HDAC2ETS1AFF1TBPTRIM28SP1MXI1NR2F2KDM1AFOXA1RELBPOLR2GNBNSMARCA4NFATC1NFICGATAD2BMEF2BMLLT1SMC3TAF1IKZF2CREB3L1ARID3ARNF2ARNTARID1BIRF4DPF2SKILSMARCB1NRF1RESTIKZF1SMARCA5ZNF207GMEB1TRIM22SMARCE1ELF4ASH2LTBL1XR1SOX6ATF2SIN3AEEDPHF8BACH1MNTHNRNPLLZBTB33RBFOX2SKIATF7FOXK2CBX3GABPB1ELF1GATAD2AXRCC5HDAC1MTA1BRD9EP300GATA2DACH1GATA3E2F8ZNF687TCF12RB1RAD21MTA3GATA1BCORL3MBTL2RBM39PHF21APRDM10GABPATFAP4MTA2BHLHE40KDM5BCBFA2T3SMAD5MBD2JUNDRCOR1FIP1L1ZNF143ZNF263E4F1ZNF639CREB1TAF7ZBTB7ASMAD1POU2F2ZBTB2TAL1EGR1TEAD4IRF1CTBP1HCFC1MEIS2HNRNPKMYCKDM5BUBTFAGO1CBX1RLFZNF282U2AF1AGO2CBX5E2F6ZNF384NFYBZFXHDAC2CHD1ZBTB11IKZF1EGR1TBPSKIDPF2SMARCA5GATAD2BZNF217ELF1ZNF687SIN3BCTBP1ZSCAN29RBBP5BACH1HDAC1BHLHE40KDM5ARNF2ZBTB7AGABPB1TAF1NCOA6RAD21NBNMLLT1ETS1EEDKDM1ANFICIRF1RESTPAX5MAXIRF2IKZF2EP300TRIM22ZNF384RELBPHF21AMEF2CMEF2BSMC3SAP30ZNF184MTA2BHLHE40RUNX3POU2F2MAFKSMARCA4BCL11AEBF1BATFIRF4
STIM2GH04J026864-4:26865089:T:C0.5172Enhancer133EliteeQTLs,Distancechr4:26864727-26865768ENSR4_9DMWG
NBNIKZF1NFATC3TBPIKZF2ATF2ZNF592ATF7SMAD5
STIM2GH04J026867-None0.0000Enhancer144EliteDistancechr4:26867800-26868200ENSR4_B7BZ6
TRIM28TRIM22ARID3ACBFA2T3DPF2ZNF316IKZF1
STIM2GH04J026871-None0.0000Enhancer56-Distancechr4:26871799-26872000ENSR4_9DMZF
RCOR1FOSCEBPBRESTFOXA2
STIM2GH04J026872-4:26872652:C:T2.1741Enhancer206EliteeQTLs,Distancechr4:26872576-26874930ENSR4_9DMZW
TBX21BCL11ABATFETV6RUNX3CTCF
STIM2GH04J026876-4:26877749:G:A0.3031Enhancer292EliteeQTLs,Distancechr4:26876890-26880444ENSR4_8RC53
CBFA2T3YY1CHAMP1TRIM24FOSSTAT3ATF2CEBPBZNF384CHAMP1GATA1ZEB2PMLSMARCE1KDM1ADPF2TRIM24TCF12ARID1BHDAC2CBFA2T3SOX6MTA2JUNDEP300FOXM1IKZF1TBL1XR1TAL1NR2F2ARID3ACBFA2T2NCOR1TEAD4ZNF316RNF2JUNSMARCA4
STIM2GH04J026881-4:26882839:C:CT0.6551Enhancer384EliteeQTLs,C-HiC,eRNA_co-expression,Distancechr4:26881480-26888153-
PKNOX1MLLT1ZBTB33RCOR1POLR2ANFICMEF2BZBED1ATF2CREMMEF2AARID3AMEF2CTAF1HMBOX1PKNOX1BATFZNF217CBFBSMARCA5ZBTB40POLR2ATCF7NFATC3TBL1XR1MXI1EP300MEF2CBATFMEF2AMEF2BIKZF1DPF2IKZF2RELBEEDZBTB40BMI1ETV6POLR2AGABPAATF7CTCFTBPPAX5TAF1RCOR1MTA2IRF4ELF1BCL11ANFICBHLHE40JUNBSPI1RUNX3SMC3RESTTBX21BATFSRFATF2PKNOX1CREMPKNOX1MEIS2ZNF384RFX5EGR1
STIM2GH04J026892-4:26894181:C:G0.2593Enhancer71-eQTLs,C-HiC,Distancechr4:26892003-26894277-
MTA2JUNBATF7CREM
STIM2GH04J026904-4:26904577:A:G0.1621Enhancer1-Distancechr4:26904400-26904800--
STIM2GH04J026907-None0.0000Enhancer1-Distancechr4:26907800-26908399-
RFX5
STIM2GH04J026915-4:26916729:T:G0.5033Enhancer36-eQTLs,C-HiC,Distancechr4:26915325-26918048ENSR4_8RCWL
IKZF1NFICMXI1EP300GATA2
STIM2GH04J026929-4:26931280:C:T0.3681Enhancer126-eQTLs,Distancechr4:26929170-26933894-
GABPB1E2F1ATF2CREMEP300
STIM2GH04J026936-4:26937030:T:C0.1340Enhancer322EliteeQTLs,Distancechr4:26936758-26937201-
TRIM28CBFA2T2SMARCC2L3MBTL2MNTHDAC1ATF3JUNDNR2F6ZNF316CBFA2T3HNF4ATBX3MLLT1ZEB2TEAD4NR2F2MAXMITFEHMT2SMARCA4NR2F1JUNBEGR1E2F6NFE2CREMDPF2JUNNCOR1BHLHE40SMARCE1FOSL1ARNTARID1BIKZF1MTA2FOSL2RESTFOSMYCCTCF
STIM2GH04J026938-4:26942753:T:C0.4438Enhancer164-eQTLs,C-HiC,Distancechr4:26938374-26943441ENSR4_8RDDH
RNF2GATA1CTBP1SMARCE1HDAC1SMARCC2MTA1DPF2THRAZEB2IKZF1NFICNCOA1KDM1AHES1TRIM24CBFA2T3MEIS2NCOR1ARID1BZMYM3TCF12EP300MTA2NFE2TAL1CBFA2T2FOXM1HDAC2SMARCA4TEAD4BCORSOX6EBF1SMARCA4CTCFARID1BTCF12NCOR1ZNF384TAL1CBFA2T2CBFA2T3
STIM2GH04J026953-None0.0000Enhancer133EliteDistancechr4:26953775-26954134-
PKNOX1NFE2MEIS2
STIM2GH04J026963-4:26965081:C:T0.5382Enhancer1-eQTLs,Distancechr4:26963832-26966050--
STIM2GH04J026976-4:26977174:G:A0.1902Enhancer36-eQTLs,Distancechr4:26976436-26980220-
SIN3AZHX2MITF
STIM2GH04J026985-4:26986018:G:A0.1294Enhancer205EliteDistancechr4:26985938-26986215ENSR4_9DP7G
ATF2NBNSKILATF7NFICMEF2BDPF2ZBED1GATAD2BRAD51SMARCA5CBX5CBFBARNTTCF12EEDZNF687RELBTRIM22TCF7IRF5IKZF1CREMMTA2ARID3ABCL11APOU2F2PAX5GABPARB1RUNX3MEF2AIKZF2NFATC3MLLT1EGR1TBX21
STIM2GH04J026986-4:26987406:A:G0.3716Enhancer1-eQTLs,Distancechr4:26986723-26987880-
NFE2L2HNRNPK
STIM2GH04J026991-4:26994279:G:A0.8271Enhancer414EliteeQTLs,C-HiC,eRNA_co-expression,Distancechr4:26991734-26995090ENSR4_C4NBM
LEF1POLR2ARBBP5TBPZBTB40ELF1RAD51NFATC3BHLHE40NFATC1SKILMEF2CSMAD1RFX1ARID3AZNF217MEF2AEP300BMI1TBX21MTA2ATF7RESTMNTSIX5HDAC1RELBPKNOX1SPI1RUNX3NBNIKZF1TRIM22DPF2MLLT1MEF2BGABPACHAMP1SMARCC2CHD4ATF2NCOR1ZBED1GATAD2BTCF7L2KDM1AEBF1RCOR1TCF7IKZF2MTA3TCF12CUX1ARID1BDACH1EEDTEAD4IRF4JUNBCREMCBFA2T2NFICEHMT2SMARCE1JUNDMAXEGR1RNF2SMARCA4ATF7CBFA2T3YY1GATA1BATFTAL1RUNX3RAD21ZBTB33ZBTB40ATF7
STIM2GH04J026999-4:27000082:A:G0.3289Enhancer91-C-HiC,Distancechr4:26999704-27000754-
CEBPBCTCF
STIM2GH04J027004-None0.0000Enhancer63EliteDistancechr4:27004271-27004454--
STIM2GH04J027005-4:27005029:T:G0.3201Enhancer222EliteeQTLs,C-HiC,Distancechr4:27004779-27008088ENSR4_C4NCK
ATF3JUNDFOSSTAT3CEBPBYY1SP1RXRAHNF4AATF2MEF2ASPI1CEBPBFOS
STIM2GH04J027010-4:27010422:C:T0.5690Enhancer202EliteDistancechr4:27010399-27010800ENSR4_9DPGK, ENSR4_58CJFR
ATF4CTCFMLLT1KDM1AZNF217GATA3CHAMP1RAD21SMC3ZNF143PKNOX1TRIM22MEIS2REST