GWAS Annotated: TENM2

Gene: teneurin transmembrane protein 2

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
TENM2GH05J166964-5:166964470:G:A0.4053Enhancer6-Distancechr5:166964163-166964523--
TENM2GH05J166978-5:166978981:G:T1.1660Enhancer144EliteDistancechr5:166978200-166980000ENSR5_94G9GL, ENSR5_B385PW
FOXA1USF1RAD21MXI1TAF1CTCFHDAC2PHF8POLR2AASH2LSMC3RBBP5EP300KDM1ABACH1KDM4ARESTZNF263GATA2RAD21
TENM2GH05J167283-5:167283981:A:G3.5671Enhancer99-Distancechr5:167283948-167285241ENSR5_86WRH9
JUNDFOSSTAT3
TENM2GH05J167285-5:167285767:T:C2.6402Enhancer56-Distancechr5:167285721-167286031-
MAFKRAD21CEBPBHNF4A
TENM2GH05J167294-5:167294189:C:A1.0740Enhancer222EliteDistancechr5:167294083-167296943ENSR5_CLL7R, ENSR5_86WRQB
NR2F2ATF3GABPANANOGEP300MYCSP1BACH1NFE2L2MAFKJUNDMAFFFOSL2FOSFOXA1JUNSTAT3RCOR1TCF12BHLHE40SIN3AATF7CEBPBCTCFSMARCA4GATA3GATA2POLR2ARESTMAFFMAFKJUNDFOSFOSL2NANOGSMARCA4POLR2ANFE2L2MAFF
TENM2GH05J167303-5:167303382:A:AGAT0.9444Enhancer63EliteDistancechr5:167303200-167303425--
TENM2GH05J167305-5:167305981:C:T1.0592Enhancer56-Distancechr5:167305455-167306325-
CHD7HDAC2NANOG
TENM2GH05J167358-5:167359243:G:C0.9762Enhancer71-C-HiC,Distancechr5:167358794-167359461-
ASH2LRBBP5NANOGATF2POLR2AEP300SP1JUNDATF7TBPJUNASH2L
TENM2GH05J167383-5:167383874:A:G0.4520Enhancer13-eQTLs,Distancechr5:167383725-167383950--
TENM2GH05J167415-5:167415886:A:G0.7106Enhancer98-Distancechr5:167415816-167416069-
MXI1YY1RCOR1GATA3GATA2
TENM2GH05J167511-None0.0000Enhancer56-Distancechr5:167511395-167511545-
CHD7TAF1NANOG
TENM2GH05J167549-None0.0000Enhancer1-Distancechr5:167549855-167550005-
NANOGTCF12
TENM2GH05J167573-5:167574327:A:G0.7414Promoter/Enhancer253EliteDistancechr5:167573114-167574462ENSR5_B388WT
EP300JUNDCTCFASH2LPOLR2AMXI1RAD21CHD7SMARCA4SMC3TAF7YY1EZH2ZNF384TAF1ZEB1TBPSIX5MYCSIN3ACBX8
TENM2GH05J167584-5:167584278:C:A1.0247Enhancer18-Distancechr5:167584267-167584667--
TENM2GH05J167629-5:167629074:C:A0.3958Enhancer1-Distancechr5:167629003-167630385-
BATFSTAT3FOS
TENM2GH05J167632-5:167632556:G:A2.5571Enhancer98EliteDistancechr5:167632515-167635619ENSR5_CLM5B
CEBPBSP1FOSTCF12NR3C1FOXA1CEBPB
TENM2GH05J167638-5:167640510:C:T0.4903Enhancer63EliteDistancechr5:167638497-167640689ENSR5_B3899C, ENSR5_94GJJX
FOSJUNDNR3C1EP300EP300FOSSTAT3
TENM2GH05J167640-5:167642639:A:T0.6765Enhancer188EliteDistancechr5:167640947-167645300ENSR5_CLM5Z, ENSR5_94GJLC
FOXA1NR3C1GABPASP1FOSPOLR2AFOSL2TBPJUNDMAFKSTAT3EP300BHLHE40FOSSTAT3CEBPBJUNDMNTKDM1AEP300CREB1STAT3MYCCEBPBFOSFOS
TENM2GH05J167652-5:167652842:A:C0.1187Enhancer82-Distancechr5:167652775-167652925ENSR5_94GJNN
FOSL2FOSJUND
TENM2GH05J167653-None0.0000Enhancer192EliteDistancechr5:167653815-167654045ENSR5_B389CH
USF2USF1RAD51ATF3TCF12SP1GATA3GABPACEBPBFOSFOXA1STAT3FOSL2FOXA2
TENM2GH05J167661-None0.0000Enhancer69-Distancechr5:167661888-167662262-
STAT3
TENM2GH05J167696-5:167697436:G:A2.0705Enhancer384EliteDistancechr5:167696363-167702441ENSR5_53GFZMN, ENSR5_B389L4
CTCFRAD21PKNOX1CHD7TCF7L2POLR2ASIN3ABCL3GABPAMAFFEP300ZBTB33TAF1ATF3ZNF263YY1RESTMAFKSP1FOSL2TBPSTAT3FOSELF1CEBPBTCF12MYCCTCFCTBP1SIX5HDAC2BHLHE40FOXA1ESR1SMC3NR3C1JUNDBCL11ARAD21NANOGJUNMAFKMAFFFOS
TENM2GH05J167710-5:167711055:G:A1.0583Enhancer36-Distancechr5:167710135-167711321ENSR5_94GKBG
GATA3
TENM2GH05J167723-5:167723555:G:C1.1946Enhancer292EliteDistancechr5:167723199-167723800ENSR5_B389PJ, ENSR5_53GG66H
CTCFZNF579EP300SP1SMC3YY1RAD21MAXXRCC5L3MBTL2ARNTZNF263ATF3STAT3RESTZNF143TRIM22MAFKKLF16RUNX3RFX5ZNF316MXI1BHLHE40RB1MAFFZNF444GATA3C11orf30MYCUSF2FOSJUNDUSF1FOXA2FOXA1
TENM2GH05J167728-5:167729985:T:C3.2866Enhancer247EliteDistancechr5:167728991-167731239ENSR5_B389QJ
MYCSTAT3CEBPBRCOR1FOSL2JUNDBHLHE40FOSFOXA1
TENM2GH05J167743-5:167743251:C:T3.1613Enhancer244EliteDistancechr5:167743241-167744940ENSR5_94GKN2
ESR1JUNDMYCNR3C1STAT3CEBPBFOS
TENM2GH05J167754-5:167755926:C:A3.0506Promoter/Enhancer335EliteeQTLs,Distancechr5:167754250-167756153ENSR5_B389W3, TENM2_1
ZNF263SMARCA4SMARCA4
TENM2GH05J167758-5:167760111:T:C3.2898Enhancer144EliteDistancechr5:167758083-167761030ENSR5_B389WQ
FOSFOSSP1STAT3TCF12JUNDCTCFNR3C1FOSL2MYCCEBPB
TENM2GH05J167762-None0.0000Enhancer63EliteDistancechr5:167762980-167764708ENSR5_94GKTS
STAT3FOSSMARCA4
TENM2GH05J167770-5:167771037:G:A2.9688Enhancer133EliteDistancechr5:167770000-167771510ENSR5_94GKXQ
CEBPB
TENM2GH05J167785-5:167785856:T:G1.3402Enhancer172EliteDistancechr5:167785018-167786316-
SREBF1MITFEP300RAD51SMARCA4EP300
TENM2GH05J167802-5:167802999:T:G2.4567Enhancer136EliteDistancechr5:167802269-167803807ENSR5_94GLB6
SP1SRF
TENM2GH05J167804-5:167805231:A:T0.9677Enhancer63EliteDistancechr5:167804125-167806158-
POLR2AMYCFOS
TENM2GH05J167813-5:167814060:A:C2.6650Enhancer233EliteeQTLs,Distancechr5:167813834-167818117ENSR5_B38B7R, ENSR5_B38B7Z
SMARCA4STAT3ZNF143EP300FOSBHLHE40MAFKMYCFOSSTAT3SPI1FOSSTAT3POLR2AATF4STAT3FOSCEBPB
TENM2GH05J167819-5:167819201:C:A0.7058Enhancer126-Distancechr5:167819181-167822792ENSR5_86X7XS, ENSR5_94GLH9
EEDDPF2IKZF1ATF7MTA2RELBETV6JUNBIKZF2SRFPAX5ARNTNBNBATFSPI1BCL11AYY1POLR2ASMARCA4CTCF
TENM2GH05J167832-5:167832868:T:TGTAGATAG0.8969Enhancer6-Distancechr5:167832763-167833116-
CEBPB
TENM2GH05J167838-5:167839616:T:C2.1683Enhancer36-Distancechr5:167838642-167839800-
EZH2ATF2
TENM2GH05J167850-5:167850701:G:A0.1476Enhancer1-Distancechr5:167850559-167850939--
TENM2GH05J167851-None0.0000Enhancer1-Distancechr5:167851015-167851165--
TENM2GH05J167900-None0.0000Enhancer11-Distancechr5:167900538-167900851--
TENM2GH05J167905-5:167906049:C:T0.3180Enhancer180EliteDistancechr5:167905340-167906646-
EZH2CTCFCTCFNANOG
TENM2GH05J167916-None0.0000Enhancer64-Distancechr5:167916888-167916955ENSR5_B38BQH
USF2USF1EP300
TENM2GH05J167933-5:167934992:T:C0.6673Enhancer125EliteDistancechr5:167933955-167935277ENSR5_94GMP5, ENSR5_94GMP8
EP300POLR2A
TENM2GH05J167937-5:167937730:C:T0.8945Enhancer111-Distancechr5:167937134-167942034ENSR5_86XBH7
MAFFMAFKZNF316EP300MAFKBACH1C11orf30ZNF316CREB1MAFFNFE2L2NFE2SMC3BHLHE40
TENM2GH05J167942-5:167942517:C:T0.7539Enhancer336EliteDistancechr5:167942498-167947634ENSR5_CLMXT, ENSR5_86XBNS
FOSCTCFPOLR2AFOSTBPSTAT3EP300JUNDCEBPBPKNOX1SMARCA4FOSEP300
TENM2GH05J167949-5:167950375:A:G0.9629Enhancer160EliteDistancechr5:167949029-167951600ENSR5_B38BXD
GATA2EGR1CTCFCBFA2T3MYCEP300TEAD4
TENM2GH05J168006-None0.0000Enhancer1--chr5:168006065-168007214ENSR5_86XCZ5
SMARCA4
TENM2GH05J168047-5:168047469:A:G0.1984Enhancer199Elite-chr5:168047179-168047908ENSR5_53GJ7PT, ENSR5_53GJ7Q3
CTCFRESTSMC3RAD21YY1RXRAEP300MAFKCTBP1NR2F2NR2F6HNF4ASTAT3TRIM22SMARCA4FOSGATA2MEF2BSMARCA4RCOR1EBF1
TENM2GH05J168048-None0.0000Enhancer82--chr5:168047915-168048065-
CTCFHNF4AGATA2MEF2BSMARCA4EBF1
TENM2GH05J168085-5:168086375:C:T0.3753Enhancer288Elite-chr5:168085356-168087025ENSR5_CLNBZ, ENSR5_53GJGH2
SP1ZNF263CTCFEP300JUNDTBPFOXA1FOSRAD21GATA3FOXA2TRIM22SMC3USF1
TENM2GH05J168105-5:168106343:AATC:A0.4787Enhancer137--chr5:168105172-168107199ENSR5_B38CQR, ENSR5_B38CQX
CTCFPOLR2ASP1HDAC2MAFKC11orf30ZNF316MAFFNFE2CBFA2T3PKNOX1BACH1TCF12TAL1POLR2ASMARCA4EP300CREB1ATF2POLR2A
TENM2GH05J168110-None0.0000Enhancer63--chr5:168110826-168111157--
TENM2GH05J168143-None0.0000Enhancer1--chr5:168143400-168144000ENSR5_94GPXN
POLR2A
TENM2GH05J168159-None0.0000Enhancer105--chr5:168159575-168159725ENSR5_94GQ59
TRIM28CTCFSIN3ARFX1SPI1RAD21BMI1
TENM2GH05J168164-5:168164182:G:A0.5975Enhancer1--chr5:168164075-168164225-
SP1CTCF
TENM2GH05J168165-5:168165515:C:T0.4800Enhancer1--chr5:168165315-168165525ENSR5_B38D4H
ASH2LPOLR2AYY1EGR1
TENM2GH05J168177-5:168179127:T:C0.9907Enhancer71--chr5:168177958-168179351ENSR5_B38D6C, ENSR5_86XHN2
CTCFRCOR1RAD21RFX5RESTNFIBEP300
TENM2GH05J168219-None0.0000Enhancer246Elite-chr5:168219584-168220199ENSR5_B38DDC, ENSR5_53GKBB6
CTCFYY1TCF12SMC3RAD21IKZF1GABPAE4F1ATF7SP1FOXK2FOXA1ELF4ELF1RUNX3ETV4ZNF384FOXA2TAF1HNF4AETS1BHLHE40TBL1XR1TEAD4GABPB1ZNF444TRIM22ZNF143GATA3MEF2AEP300BATFREST
TENM2GH05J168226-5:168227783:G:A1.1415Enhancer297Elite-chr5:168226996-168228816-
EP300NR2F2GATA2FOSSTAT3ZNF687STAT5AMTA2NFATC3ATF2CBFBZBTB40SRFEEDATF7MLLT1POLR2ANBNCREMNFICMEF2ATRIM22IKZF1PAX5RUNX3TBX21CUX1BCL3RAD21RELBELF1GATAD2BEBF1IKZF2DPF2YY1RAD51EBF1
TENM2GH05J168260-5:168261306:C:T1.6625Enhancer233Elite-chr5:168260290-168261533ENSR5_94GR7N
TRIM28PKNOX1SMARCA4