GWAS Annotated: TLR3

Gene: toll like receptor 3

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
TLR3GH04J185835-4:185838947:T:A2.3113Enhancer406EliteeQTLschr4:185835466-185842375ENSR4_87GJ5X, ENSR4_94PQKL, ENSR4_CNFW8
C11orf30MAFKMAFFZNF316YY1CREMHDAC1CHD4NCOR1SKIUSF1SOX13EP300RESTASH2LFOXA1FOXA2NR2F6KDM1ANANOGGATA4HNF1ATCF7NR2F2HNF4GSP1RXRAHNF4AYY1RXRARAD21NANOGETS1CHD7TAF1POLR2ACHD1CEBPBCTCFATF3RFX1POLR2ASP1JUNDCHD7TAF1RXRAMYCSTAT3EP300RAD21FOSGATA2FOSL2NR2F2JUNNR3C1TBPBCL11ATCF7L2ZNF263CTBP1SMARCA4TAF7MAFKCTCFHDAC2NANOGL3MBTL2PKNOX1EP300POLR2AFOXA1GATA3POLR2A
TLR3GH04J186027-None0.0000Enhancer1-Distancechr4:186027883-186028132-
ATF3
TLR3GH04J186028-4:186028744:C:T0.6327Enhancer202EliteC-HiC,Distancechr4:186028553-186032903ENSR4_87GN8N, ENSR4_CNGF3, ENSR4_53LQFKC
NANOGRESTRXRAZBTB33JUNDMAXNR2F2YY1MXI1GABPASP1EP300EGR1HNF4APOLR2AATF3RAD21SMARCA4SMC3CTCFYY1CTCFRAD21
TLR3GH04J186038-4:186038332:A:C0.4911Enhancer140-Distancechr4:186038306-186038436ENSR4_B3CWT9, ENSR4_53LQGKM
CTCFSMC3MXI1RAD21TBX21RESTTRIM22STAT3EP300ZNF143RFX5CEBPB
TLR3GH04J186049-4:186051165:G:A1.0266Enhancer1-Distancechr4:186049836-186051365--
TLR3GH04J186058-None0.0000Enhancer105-Distancechr4:186058806-186058936ENSR4_94PSXH
MTA2ARNTRESTIKZF1IKZF2BHLHE40SPI1MEF2BBCL3PAX5POU2F2RUNX3BATFEBF1MAFK
TLR3GH04J186067-4:186068179:T:A0.5671Promoter/Enhancer477EliteDistancechr4:186067666-186070048ENSR4_53LQMNT, ENSR4_B3CX2N, ENSR4_53LQMTC, ENSR4_94PT3H, TLR3_1
TRIM28CTCFPOLR2ASP1FOXA1MAXRXRAHNF4ATAF1JUNDFOXA2RAD21SMC3PKNOX1EP300YY1RESTYY1JUNDATF7PRDM10ZNF384HNF4AIRF1TBPEP300RAD21IRF2
TLR3GH04J186078-4:186079455:A:C0.3210Enhancer91-Distancechr4:186078586-186079927ENSR4_94PT6D
ASH2LEZH2RAD21FOXA1
TLR3GH04J186080-4:186081757:T:C0.3484Enhancer118EliteDistancechr4:186080786-186082070ENSR4_94PT72, ENSR4_7DXFQB
KDM4AASH2LYY1SP1EP300TCF12POLR2ATBPNANOGHDAC2TAF1
TLR3GH04J186133-4:186133054:G:A1.0067Enhancer82-C-HiCchr4:186133026-186133136ENSR4_B3CXCX
CTCFZNF263JUNDRAD21FOS
TLR3GH04J186143-4:186143990:C:T1.9766Promoter/Enhancer467EliteC-HiCchr4:186143971-186145868ENSR4_B3CXFM, ENSR4_53LR5R9, ENSR4_B3CXFQ, FAM149A_1
YY1CTCFEP300POLR2AMAXL3MBTL2RBBP5MNTMXI1BACH1EZH2SUZ12CHD1ZFXZNF263ASH2LRBM25HNRNPLLSIN3AGATA2POLR2AEGR1GATA3UBTFCTCFKDM4APHF8L3MBTL2TAF1EP300RNF2YY1RAD21MAXMXI1RXRA
TLR3GH04J186150-4:186150136:C:G1.8624Enhancer99-C-HiCchr4:186150066-186150296ENSR4_94PTWT, ENSR4_53LR6Q5
NR2F2IKZF1CTCFXRCC5YY1ZNF143RAD21