GWAS Annotated Elements: TMEM260

Gene: transmembrane protein 260

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH14J056216 - 14:56217402:G:C 0.5938 Enhancer Elite TF_co-expression chr14:56216425-56217465
TRIM28ZNF592MEIS2NFIBNFICFOXK2C11orf30ZNF316CDC5LNFATC3RBFOX2POLR2APMLKDM5BTBPHNRNPLMEF2APOLR2GTAF7SMAD5ZBTB7AZBTB2HNRNPUL1MAXTAL1ZNF263NFXL1CTCFPKNOX1RAD21
GH14J056378 - 14:56379292:T:G 1.2629 Enhancer Elite Distance chr14:56378058-56379399
POLR2ASTAT3GATA2EP300MYCFOSRAD21MAFKMAFFCEBPB
GH14J056412 - 14:56412926:T:A 1.4655 Enhancer Elite Distance chr14:56412600-56413012
POLR2AGATA2FOSCTCF
GH14J056422 - 14:56422630:TA:T 1.6106 Enhancer Elite Distance chr14:56422262-56423189
CTCFRAD21SMC3EP300RESTCEBPBDACH1TFAP4TEAD4TRIM22ZNF143USF1YY1
GH14J056423 - None 0.0000 Enhancer - Distance chr14:56423592-56423936
L3MBTL2ZFX
GH14J056487 - 14:56487420:C:T 0.4529 Enhancer - Distance chr14:56487382-56487432
CTCFRAD21SMC3
GH14J056488 - 14:56487677:A:T 1.7470 Enhancer - Distance chr14:56487542-56487692
CTCF
GH14J056489 - 14:56488111:T:C 0.7947 Enhancer - Distance chr14:56487842-56488112
CEBPBFOSSPI1MYCUSF2
GH14J056491 - 14:56491529:C:T 0.5677 Enhancer Elite Distance chr14:56491399-56491601
CTCFMNTSIN3AMXI1EP300MAXSMC3MYCRAD21SMARCA4TRIM22CREB1YY1HDAC2RUNX3JUNDZNF143RESTRFX1
GH14J056513 - 14:56513836:C:T 1.2316 Enhancer - Distance chr14:56513836-56514311 -
GH14J056525 - None 0.0000 Enhancer - Distance chr14:56525062-56525212
EP300
GH14J056542 - 14:56543031:A:G 1.0783 Enhancer - Distance chr14:56542874-56543218 -
GH14J056556 - None 0.0000 Enhancer - Distance chr14:56556062-56556192
CTCFYY1RESTSP1FOXA1CTBP1JUNDZNF217GATA3RAD21RXRAEP400ATF3FOXA2ATF7SMC3ZEB2FOXK2HNF4ACEBPBMAXATF4TRIM22BRD9SOX6EP300ZNF143SMARCA4ATF2TRIM24ZNF384L3MBTL2CREB3L1MYC
GH14J056571 - 14:56571893:C:G 0.7625 Enhancer - eQTLs,Distance chr14:56571727-56572005
ZNF384
GH14J056578 - 14:56580632:C:G 0.6323 Promoter/Enhancer Elite eQTLs,eRNA_co-expression,Distance chr14:56578942-56581340
ZBTB33CTCFRBM39ZNF384NRF1KDM5AZHX2SMC3CREMTCF7L2ZBTB33YY1STAT3MNTTRIM22NBNSIN3ARAD21ZBTB40PRDM10MAFKMAXMYCGABPAZNF444CBFBFOXA1HCFC1SP1CHAMP1ZNF143ZNF263ATF7NR2F2MTA2CC2D1ASPI1CREB1GMEB1RUNX3NR2C1GATA3ASH2LHNF4AC11orf30BRD4SKILRELBAFF1NFICARNTKLF5MIER1ELF1CLOCKZNF574ZNF579FOXM1ETV4XRCC5MLLT1EP300FOXK2ATF3JUNBNFATC3PKNOX1TBPE2F8ARID3AZNF217BHLHE40CHD1POU2F2SIX5E4F1ZBTB5STAT1SMARCE1KDM4BESRRAZNF207TCF12ELF4E2F1HDAC1ETV6JUNIRF3EP400ZNF24EGR1MAFFGATAD2BRNF2JUNDRBFOX2PCBP1ZBTB7BSREBF1ELK1CTBP1POLR2AASH1LRFX5MEF2CSKIFIP1L1TBX21SREBF2BRCA1USF1PMLSIN3BMBD2CREB3L1GABPB1POLR2GMXI1IKZF1PRPF4TAF1TAF15SMAD5RB1PHF8EEDMAFKETS1ZFXU2AF1FUSDPF2GATA4HNRNPLHNRNPLLTAF7BACH1MTA3RESTRBBP5HDAC6LEF1RFX1RB1SPI1KDM5BZNF687PHF20AGO2KDM4AZBTB7AGATA1SAP30RUNX3SPI1MTA2FOXA2POLR2AATF3JUNDFOSTBX21RELBSKILMEIS2MTA2BMI1IKZF1RUNX3CREMDPF2BATFSPI1IKZF2JUNBTCF7
GH14J056584 - 14:56585246:CTTA:C 0.3283 Enhancer - Distance chr14:56584833-56585255
TRIM28
GH14J056590 - 14:56590548:C:T 0.2898 Enhancer - Distance chr14:56590253-56590886
SMARCA4PKNOX1TRIM28CTCFGATA2RCOR1EP300SMARCA4SIX5RAD21
GH14J056608 - None 0.0000 Enhancer - Distance chr14:56608842-56608932
GATA1EP400L3MBTL2SMARCA4ATF3ATF4SOX6ATF7TCF12RXRAZNF318FOXM1STAT3ATF2HNF4AMEIS2ZEB2TBPTEAD4FOSEP300ARID1BTRIM24CEBPBJUNDGATA3TAL1FOXA1HMBOX1
GH14J056648 - 14:56648268:T:TG 0.2128 Enhancer - Distance chr14:56648102-56648781
JUNDFOSL2CREB1
GH14J056659 - 14:56659654:A:C 0.7527 Enhancer - eQTLs chr14:56659405-56659789
EZH2CTCF
GH14J056760 - None 0.0000 Enhancer - eRNA_co-expression,TF_co-expression chr14:56760306-56760668
PKNOX1
GH14J056952 - 14:56953472:CT:C 0.7726 Enhancer Elite TF_co-expression chr14:56952289-56954727
CTCFSMC3