GWAS Annotated Elements: TOX3

Gene: TOX high mobility group box family member 3

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH16J052407 - 16:52407746:G:A 1.0163 Enhancer - eQTLs chr16:52407240-52408920
EP300YY1ZBTB33NCOR1MAXRESTHNF4AARID3AHDAC1NR2F2RXRASP1GABPAKDM1AFOXA1HNF4GJUNDATF3FOSL2RAD21FOXA2CEBPBMNTASH2LSIN3ACCAR2XRCC5TFAP4SKIHNF1ATBX3ARID3AHDAC2GATA4SOX13TBL1XR1CREMNR2F6FOXK2BHLHE40TCF7FOSL2ELF1CREB1ZNF24ZNF384FOXP1ATF7ATMETV4CEBPBEP300LCORLZBTB40
GH16J052434 - 16:52435374:T:C 0.5574 Enhancer - Distance chr16:52434616-52437850
POLR2GRBM22FOSL2POLR2ARBM22EP300CTCFPOLR2GRAD21TFAP4SMARCA4RESTMAFFSMARCA4HNRNPKHNRNPUL1EP300RBM22SMARCA4
GH16J052452 - 16:52452157:A:G 0.8526 Enhancer - eQTLs,Distance chr16:52452148-52452218
EHMT2CTCFHDAC1PRPF4KDM1ASKIHNF4GHNRNPKHNRNPUL1TCF7NR2F6SP1HNF4ARXRAHNF1AFOXK2FOXA2TFAP4FOXP1ARID3ACREMFOXA1SOX13TBX3CHD4
GH16J052455 - 16:52456199:A:G 0.1241 Enhancer - eQTLs,Distance chr16:52455741-52457098
ZMYM3EHMT2CHD4NR2F6CREMSP1NCOR1TFAP4HDAC2JUNDSOX13FOXA2FOXA1PRPF4ZBTB7ARBM22TCF7KDM1AEP300LCORLFOSL2ASH2LCHD4
GH16J052460 - None 0.0000 Enhancer - Distance chr16:52460344-52460712 -
GH16J052461 - None 0.0000 Enhancer - Distance chr16:52460734-52461101
EP300
GH16J052466 - None 0.0000 Enhancer - Distance chr16:52466032-52466265 -
GH16J052467 - None 0.0000 Enhancer - Distance chr16:52467059-52467259
FOXA1EP300
GH16J052469 - 16:52470313:C:T 0.0852 Enhancer - eQTLs,Distance chr16:52469921-52471014
FOSFOSL2JUNDJUNFOXA1SMARCA4CHD7CTCFRAD21NANOGRBM22
GH16J052488 - None 0.0000 Enhancer - Distance chr16:52488868-52489038
ASH2LRESTZBTB33EGR1NR2F2JUNDGABPANCOR1CREMATF3HNF4ASP1RXRAMAFKMAFFSOX13TBL1XR1YY1ETS1NFE2L2NR2F6SMC3MNTTCF7HNF1AGATA4FOXA2FOSL2RAD21SIN3AARID3AEP300HDAC2HNF4GFOXA1LCORLKDM1AZBTB7ARBM22MAXCEBPBZNF384
GH16J052492 - 16:52493370:T:A 1.4944 Enhancer Elite eRNA_co-expression,Distance chr16:52492468-52494403
NBNASH2LMEF2BIKZF2MTA2KDM1ASKILMAXTRIM22ZBTB33EBF1TCF7ZNF384ATF7JUNDZNF217NR2F6BHLHE40CREMIKZF1ARID3AEGR1RELBEP300HNF4ADPF2ATF3SKINCOR1KLF5RESTTCF12HNF1ATBL1XR1SP1TBPSMC3RAD21TBX3GATA4FOXA2POLR2AGATAD2BFOXA1RXRAFOXP1HNF4GCHD4TBX21NFATC3YY1EHMT2FOSL2HDAC1TFAP4BATFHDAC2FOXK2RBM22ELF1AGO2RBFOX2POLR2GRBM22
GH16J052497 - None 0.0000 Enhancer Elite Distance chr16:52496288-52496438
EP300TCF7L2KDM1AYY1ASH2LEHMT2TCF12SP1RESTFOXA2ZBTB33FUSATF3TBX3MAXCREMRAD21ETS1
GH16J052496 - 16:52496913:TA:T 0.4054 Enhancer Elite Distance chr16:52496508-52498059
EP300TCF7L2KDM1AYY1ASH2LEHMT2TCF12SP1RESTFOXA2ZBTB33FUSATF3TBX3MAXCREMRAD21ETS1ZNF24JUNDEGR1SOX13HDAC1RXRAFOXP1NCOR1HDAC2RCOR1TCF7TBL1XR1FOXA1MAFFTFAP4HNF4AFOSL2SMARCC2TBPELF1BHLHE40HNF4GLCORLHNF1ASMC3ZNF384SKINR2F6ARID3AKDM5AGATA4CEBPBKAT2BETV4RBFOX2HDAC6KDM1AFOXA1ARID3AFOSNFIBZNF263JUNDTFAP4RCOR1ETV4EP300
GH16J052498 - None 0.0000 Enhancer Elite Distance chr16:52498602-52499300
ASH2LNANOGSMARCA4
GH16J052512 - None 0.0000 Enhancer - Distance chr16:52512230-52513311
RBM22EHMT2KDM1AFOXA2EP300FOXA1HNF4GHNF4A
GH16J052517 - None 0.0000 Enhancer Elite Distance chr16:52517684-52518923 -
GH16J052523 - 16:52524761:T:G 0.5770 Enhancer - C-HiC,Distance chr16:52523493-52524873 -
GH16J052526 - 16:52526219:G:A 1.0031 Enhancer - C-HiC,Distance chr16:52526174-52527126
SIN3ARBM22
GH16J052528 - 16:52528899:G:A 1.8572 Enhancer Elite Distance chr16:52528128-52529085
RBM22POLR2GEP300CTCFYY1RAD21
GH16J052531 - None 0.0000 Enhancer Elite Distance chr16:52529148-52529298
RBM22POLR2GCTCFRAD21FOXA2FOXA1
GH16J052529 - 16:52529714:G:A 0.5833 Enhancer - Distance chr16:52529452-52530244
FOXA1
GH16J052530 - 16:52530405:C:G 0.1101 Enhancer - eRNA_co-expression,Distance chr16:52530327-52530675 -
GH16J052537 - 16:52537693:T:C 0.5836 Enhancer - Distance chr16:52537525-52537893
HNF4A
GH16J052544 - 16:52547135:C:G 1.9867 Promoter/Enhancer Elite Distance chr16:52544617-52548880
RBFOX2EZH2CREMCTCFKDM1ARESTKDM5AMXI1HDAC1HDAC2XRCC5EP300SIN3AFOXA1ZBTB7ASMC3EZH2ZNF263KDM4ARAD21RBBP5RBM39HNRNPLLASH2LHNRNPLAGO2SUZ12TAF1TFAP4PCBP1HNF4ARNF2HDAC2ZBTB7AAGO1SIN3AYY1PHF8PTBP1POLR2GAGO2RBBP5SMC3POLR2ATAF15MXI1FUSRAD21ZBTB7ATAF1POLR2GZBTB7ARBM39YY1PCBP1SUZ12ASH2LSIN3BTAF15HDAC2HNRNPLHNRNPLLEZH2AGO2RBBP5SKIZEB1SIN3AHDAC1POLR2GXRCC5ZNF263FOXA2HNF1APOLR2GSIN3ABHLHE40HDAC2RXRASMC3RAD21FOXA1ASH2LCHD4SP1NANOGCEBPBKDM5ARFX5KDM1ATFAP4NCOR1USF1CTCF
GH16J052549 - 16:52549142:G:T 0.5849 Enhancer - Distance chr16:52549008-52549218
HDAC1SIN3AASH2LCHD4SP1KDM5AKDM1ANCOR1CTCFARID3AFOXA1ELF1SMC3RAD21YY1HDAC2
GH16J052556 - None 0.0000 Enhancer - Distance chr16:52556902-52558038
POLR2AFOXA1FOSL2HNF1AGATA3NR3C1GATA4HNF4A
GH16J052558 - 16:52558939:AT:A 0.0775 Enhancer - Distance chr16:52558322-52558944
USF1
GH16J052560 - None 0.0000 Enhancer - Distance chr16:52559268-52559378
NR2F6EP300FOXA1FOXA2
GH16J052559 - None 0.0000 Enhancer - Distance chr16:52559789-52560312
SP1HNF4A
GH16J052561 - 16:52562272:G:A 1.0021 Enhancer Elite Distance chr16:52561511-52563459
HNF4ARAD21MAXYY1POLR2ATCF12JUNDRBM22CREMSP1ATF3NR2F6RESTFOXA2HNF1AETV4FOXK2XRCC5EP300TCF7TBX3HDAC2RXRAFOXA1NR3C1FOSL2TFAP4RXRAMAXFOXA1RAD21GABPAHNF4AFOXA2CEBPBCTCFETV4HNF1AFOXA1
GH16J052564 - 16:52565482:C:T 2.0032 Enhancer Elite Distance chr16:52564104-52566293
KDM1AZMYM3ASH2LTBPYY1TCF12TBX3FOXA2RESTKDM1ARXRAFOXA1SP1ZBTB33GABPAGATA3GATA4MAXZNF24JUNDHNRNPUL1ARID3ATCF7HNF4ACREMCCAR2HNF1ANR2F6NCOR1HNF4GEP300RAD21ATF3LCORLETV4FOSL2SKICTBP1TBL1XR1ZNF217DPF2SOX13TFAP4MAFFBHLHE40SMARCE1SMC3
GH16J052567 - 16:52567199:C:A 0.2181 Enhancer - Distance chr16:52567009-52567625 -
GH16J052568 - 16:52567869:T:A 0.1348 Enhancer - Distance chr16:52567772-52568398 -
GH16J052572 - 16:52572325:A:G 2.0026 Enhancer Elite C-HiC,Distance chr16:52572242-52575108
IKZF1MAFKSP1HNF4ACTCFCHD4HNRNPUL1KDM1AZMYM3TCF12SKICREMNR2F6IKZF1RESTASH2LSP1ATF3XRCC5HDAC2JUNDFOXA1EGR1ELF1GABPAPOLR2ARXRANCOR1FOXA2HNF1AGATA4MAXSMC3ARID3ASOX13SIN3ATBPBHLHE40RAD21ZHX2TCF7HNF4AIKZF2FOSL2ETV4PKNOX1EP300POLR2GEHMT2HNF4AHNF4GSMC3CHD4
GH16J052575 - 16:52575121:C:A 0.2562 Enhancer Elite Distance chr16:52575111-52575248 -
GH16J052577 - 16:52579125:G:A 2.2268 Enhancer Elite Distance chr16:52577681-52579517
FOXA1HDAC1TBPTCF12YY1CHD4NCOR1FOXA2ZNF384HDAC2ASH2LZBTB33FOXA1MAXSIN3AJUNDSKIRESTKDM1AARID3AZNF24TBL1XR1GABPATFAP4SP1RXRAFOSL2SOX13HNF1ANR2F2ETS1ATF3HNF4ABHLHE40CREMTBX3RAD21EP300ZHX2EGR1NR2F6FOXP1CEBPBUSF1TCF7CREB1HNF4GMNTGATA4TCF7FOXA1EP300ETV4